A Bayesian MCMC approach to survival analysis with doubly-censored data
Doubly-censored data refers to time to event data for which both the originating and failure times are censored. In studies involving AIDS incubation time or survival after dementia onset, for example, data are frequently doubly-censored because the date of the originating event is interval-censored...
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description | Doubly-censored data refers to time to event data for which both the originating and failure times are censored. In studies involving AIDS incubation time or survival after dementia onset, for example, data are frequently doubly-censored because the date of the originating event is interval-censored and the date of the failure event usually is right-censored. The primary interest is in the distribution of elapsed times between the originating and failure events and its relationship to exposures and risk factors. The estimating equation approach [Sun et al. (1999). Regression analysis of doubly censored failure time data with applications to AIDS studies. Biometrics 55, 909–914] and its extensions assume the same distribution of originating event times for all subjects. This paper demonstrates the importance of utilizing additional covariates to impute originating event times, i.e., more accurate estimation of originating event times may lead to less biased parameter estimates for elapsed time. The Bayesian MCMC method is shown to be a suitable approach for analyzing doubly-censored data and allows a rich class of survival models. The performance of the proposed estimation method is compared to that of other conventional methods through simulations. Two examples, an AIDS cohort study and a population-based dementia study, are used for illustration. Sample code is shown in
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doi_str_mv | 10.1016/j.csda.2010.02.025 |
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Appendix.</description><subject>Acquired immunodeficiency syndrome</subject><subject>AIDS</subject><subject>AIDS Dementia Doubly censored data Incubation period MCMC Midpoint imputation</subject><subject>Applications</subject><subject>Bayesian analysis</subject><subject>Dementia</subject><subject>Doubly censored data</subject><subject>Estimating</subject><subject>Exact sciences and technology</subject><subject>Failure</subject><subject>Failure times</subject><subject>General topics</subject><subject>Incubation period</subject><subject>Mathematical models</subject><subject>Mathematics</subject><subject>MCMC</subject><subject>Medical sciences</subject><subject>Midpoint imputation</subject><subject>Multivariate analysis</subject><subject>Numerical analysis</subject><subject>Numerical analysis. Scientific computation</subject><subject>Numerical methods in probability and statistics</subject><subject>Probability and statistics</subject><subject>Sciences and techniques of general use</subject><subject>Statistics</subject><subject>Survival</subject><issn>0167-9473</issn><issn>1872-7352</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2010</creationdate><recordtype>article</recordtype><sourceid>X2L</sourceid><recordid>eNp9kU2P0zAQhiMEYsvCH-CAckFwSfFn7EgIaalgQeqKC5ytqTOhrtIk2ElR_z0TWgpcVvKMpfEzr2b8Ztlzzpac8fLNbulTDUvBqMAEHf0gW3BrRGGkFg-zBUGmqJSRV9mTlHaMMaGMfZxdCaa5ksoustub_D0cMQXo8rvV3SqHYYg9-G0-9nma4iEcoM2hg_aYQsp_hnGb1_20aY-Fxy71Eeu8hhGeZo8aaBM-O9_X2bePH76uPhXrL7efVzfrwmtbjgVqbywNrMFqUKbeNIZXUMmKKd4YNJZvpOdSVExWxohGGN0oWSohqW5Byevs3Ul3mDZ7rGmGMULrhhj2EI-uh-D-f-nC1n3vD05Y0uOzwKuzQOx_TJhGtw_JY9tCh_2UnNHSaFGWksjX95LcSq2VqUpLqDihPvYpRWwuA3HmZq_czs1eudkrxwQdTU3rU1PEAf2lAxFntAN3cBK0onSk-N0paT0JlmKg4JXgjlLltuOe5F78-zMXvT9eE_DyDEDy0DYROh_SX04YpYzmxL09cUg-HgJGl3zAzmMdIvrR1X24b61fb5vKTg</recordid><startdate>20100801</startdate><enddate>20100801</enddate><creator>Yu, Binbing</creator><general>Elsevier B.V</general><general>Elsevier</general><scope>IQODW</scope><scope>NPM</scope><scope>DKI</scope><scope>X2L</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7SC</scope><scope>8FD</scope><scope>JQ2</scope><scope>L7M</scope><scope>L~C</scope><scope>L~D</scope><scope>5PM</scope></search><sort><creationdate>20100801</creationdate><title>A Bayesian MCMC approach to survival analysis with doubly-censored data</title><author>Yu, Binbing</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c586t-e5c782015a85a47dbf719a939041f7e781b3c1329039772f275f436423b3c8a43</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2010</creationdate><topic>Acquired immunodeficiency syndrome</topic><topic>AIDS</topic><topic>AIDS Dementia Doubly censored data Incubation period MCMC Midpoint imputation</topic><topic>Applications</topic><topic>Bayesian analysis</topic><topic>Dementia</topic><topic>Doubly censored data</topic><topic>Estimating</topic><topic>Exact sciences and technology</topic><topic>Failure</topic><topic>Failure times</topic><topic>General topics</topic><topic>Incubation period</topic><topic>Mathematical models</topic><topic>Mathematics</topic><topic>MCMC</topic><topic>Medical sciences</topic><topic>Midpoint imputation</topic><topic>Multivariate analysis</topic><topic>Numerical analysis</topic><topic>Numerical analysis. Scientific computation</topic><topic>Numerical methods in probability and statistics</topic><topic>Probability and statistics</topic><topic>Sciences and techniques of general use</topic><topic>Statistics</topic><topic>Survival</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Yu, Binbing</creatorcontrib><collection>Pascal-Francis</collection><collection>PubMed</collection><collection>RePEc IDEAS</collection><collection>RePEc</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Computer and Information Systems Abstracts</collection><collection>Technology Research Database</collection><collection>ProQuest Computer Science Collection</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>Computer and Information Systems Abstracts Academic</collection><collection>Computer and Information Systems Abstracts Professional</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Computational statistics & data analysis</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Yu, Binbing</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A Bayesian MCMC approach to survival analysis with doubly-censored data</atitle><jtitle>Computational statistics & data analysis</jtitle><addtitle>Comput Stat Data Anal</addtitle><date>2010-08-01</date><risdate>2010</risdate><volume>54</volume><issue>8</issue><spage>1921</spage><epage>1929</epage><pages>1921-1929</pages><issn>0167-9473</issn><eissn>1872-7352</eissn><abstract>Doubly-censored data refers to time to event data for which both the originating and failure times are censored. In studies involving AIDS incubation time or survival after dementia onset, for example, data are frequently doubly-censored because the date of the originating event is interval-censored and the date of the failure event usually is right-censored. The primary interest is in the distribution of elapsed times between the originating and failure events and its relationship to exposures and risk factors. The estimating equation approach [Sun et al. (1999). Regression analysis of doubly censored failure time data with applications to AIDS studies. Biometrics 55, 909–914] and its extensions assume the same distribution of originating event times for all subjects. This paper demonstrates the importance of utilizing additional covariates to impute originating event times, i.e., more accurate estimation of originating event times may lead to less biased parameter estimates for elapsed time. The Bayesian MCMC method is shown to be a suitable approach for analyzing doubly-censored data and allows a rich class of survival models. The performance of the proposed estimation method is compared to that of other conventional methods through simulations. Two examples, an AIDS cohort study and a population-based dementia study, are used for illustration. Sample code is shown in
Appendix.</abstract><cop>Amsterdam</cop><pub>Elsevier B.V</pub><pmid>20514348</pmid><doi>10.1016/j.csda.2010.02.025</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Acquired immunodeficiency syndrome AIDS AIDS Dementia Doubly censored data Incubation period MCMC Midpoint imputation Applications Bayesian analysis Dementia Doubly censored data Estimating Exact sciences and technology Failure Failure times General topics Incubation period Mathematical models Mathematics MCMC Medical sciences Midpoint imputation Multivariate analysis Numerical analysis Numerical analysis. Scientific computation Numerical methods in probability and statistics Probability and statistics Sciences and techniques of general use Statistics Survival |
title | A Bayesian MCMC approach to survival analysis with doubly-censored data |
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