Sugar and abscisic acid signaling orthologs are activated at the onset of ripening in grape
The onset of ripening involves changes in sugar metabolism, softening, and color development. Most understanding of this process arises from work in climacteric fruits where the control of ripening is predominately by ethylene. However, many fruits such as grape are nonclimacteric, where the onset o...
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description | The onset of ripening involves changes in sugar metabolism, softening, and color development. Most understanding of this process arises from work in climacteric fruits where the control of ripening is predominately by ethylene. However, many fruits such as grape are nonclimacteric, where the onset of ripening results from the integration of multiple hormone signals including sugars and abscisic acid (ABA). In this study, we identified ten orthologous gene families in Vitis vinifera containing components of sugar and ABA-signaling pathways elucidated in model systems, including PP2C protein phosphatases, and WRKY and homeobox transcription factors. Gene expression was characterized in control- and deficit-irrigated, field-grown Cabernet Sauvignon. Sixty-seven orthologous genes were identified, and 38 of these were expressed in berries. Of the genes expressed in berries, 68% were differentially expressed across development and/or in response to water deficit. Orthologs of several families were induced at the onset of ripening, and induced earlier and to higher levels in response to water deficit; patterns of expression that correlate with sugar and ABA accumulation during ripening. Similar to field-grown berries, ripening phenomena were induced in immature berries when cultured with sucrose and ABA, as evidenced by changes in color, softening, and gene expression. Finally, exogenous sucrose and ABA regulated key orthologs in culture, similar to their regulation in the field. This study identifies novel candidates in the control of nonclimacteric fruit ripening and demonstrates that grape orthologs of key sugar and ABA-signaling components are regulated by sugar and ABA in fleshy fruit. |
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Most understanding of this process arises from work in climacteric fruits where the control of ripening is predominately by ethylene. However, many fruits such as grape are nonclimacteric, where the onset of ripening results from the integration of multiple hormone signals including sugars and abscisic acid (ABA). In this study, we identified ten orthologous gene families in Vitis vinifera containing components of sugar and ABA-signaling pathways elucidated in model systems, including PP2C protein phosphatases, and WRKY and homeobox transcription factors. Gene expression was characterized in control- and deficit-irrigated, field-grown Cabernet Sauvignon. Sixty-seven orthologous genes were identified, and 38 of these were expressed in berries. Of the genes expressed in berries, 68% were differentially expressed across development and/or in response to water deficit. Orthologs of several families were induced at the onset of ripening, and induced earlier and to higher levels in response to water deficit; patterns of expression that correlate with sugar and ABA accumulation during ripening. Similar to field-grown berries, ripening phenomena were induced in immature berries when cultured with sucrose and ABA, as evidenced by changes in color, softening, and gene expression. Finally, exogenous sucrose and ABA regulated key orthologs in culture, similar to their regulation in the field. This study identifies novel candidates in the control of nonclimacteric fruit ripening and demonstrates that grape orthologs of key sugar and ABA-signaling components are regulated by sugar and ABA in fleshy fruit.</description><identifier>ISSN: 0032-0935</identifier><identifier>EISSN: 1432-2048</identifier><identifier>DOI: 10.1007/s00425-010-1165-2</identifier><identifier>PMID: 20407788</identifier><identifier>CODEN: PLANAB</identifier><language>eng</language><publisher>Berlin/Heidelberg: Berlin/Heidelberg : Springer-Verlag</publisher><subject>Abscisic Acid - metabolism ; Agriculture ; Berries ; Biological and medical sciences ; Biomedical and Life Sciences ; Carbohydrate Metabolism ; Ecology ; Forestry ; Fruits ; Fundamental and applied biological sciences. Psychology ; Gene expression ; Gene Expression Profiling ; Gene expression regulation ; Genes ; Hormone action ; Life Sciences ; Nonclimacteric fruit ; Original ; Original Article ; Phylogeny ; Plant cells ; Plant Sciences ; Plants ; Polymerase Chain Reaction ; Ripening ; Signal Transduction ; Sugar ; Sugars ; Transcription factors ; Vitis - genetics ; Vitis - metabolism ; Vitis - physiology ; Vitis vinifera ; Water deficit</subject><ispartof>Planta, 2010-06, Vol.232 (1), p.219-234</ispartof><rights>Springer-Verlag Berlin Heidelberg 2010</rights><rights>The Author(s) 2010</rights><rights>2015 INIST-CNRS</rights><rights>Springer-Verlag 2010</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c610t-9bf30f30f262a192a93b610cf7c2ee5e973fdfe2f920947da53fa3a489f098843</citedby><cites>FETCH-LOGICAL-c610t-9bf30f30f262a192a93b610cf7c2ee5e973fdfe2f920947da53fa3a489f098843</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/23391633$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/23391633$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>230,314,776,780,799,881,27901,27902,41464,42533,51294,57992,58225</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=22869481$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/20407788$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Gambetta, Gregory A</creatorcontrib><creatorcontrib>Matthews, Mark A</creatorcontrib><creatorcontrib>Shaghasi, Tarana H</creatorcontrib><creatorcontrib>McElrone, Andrew J</creatorcontrib><creatorcontrib>Castellarin, Simone D</creatorcontrib><title>Sugar and abscisic acid signaling orthologs are activated at the onset of ripening in grape</title><title>Planta</title><addtitle>Planta</addtitle><addtitle>Planta</addtitle><description>The onset of ripening involves changes in sugar metabolism, softening, and color development. Most understanding of this process arises from work in climacteric fruits where the control of ripening is predominately by ethylene. However, many fruits such as grape are nonclimacteric, where the onset of ripening results from the integration of multiple hormone signals including sugars and abscisic acid (ABA). In this study, we identified ten orthologous gene families in Vitis vinifera containing components of sugar and ABA-signaling pathways elucidated in model systems, including PP2C protein phosphatases, and WRKY and homeobox transcription factors. Gene expression was characterized in control- and deficit-irrigated, field-grown Cabernet Sauvignon. Sixty-seven orthologous genes were identified, and 38 of these were expressed in berries. Of the genes expressed in berries, 68% were differentially expressed across development and/or in response to water deficit. Orthologs of several families were induced at the onset of ripening, and induced earlier and to higher levels in response to water deficit; patterns of expression that correlate with sugar and ABA accumulation during ripening. Similar to field-grown berries, ripening phenomena were induced in immature berries when cultured with sucrose and ABA, as evidenced by changes in color, softening, and gene expression. Finally, exogenous sucrose and ABA regulated key orthologs in culture, similar to their regulation in the field. This study identifies novel candidates in the control of nonclimacteric fruit ripening and demonstrates that grape orthologs of key sugar and ABA-signaling components are regulated by sugar and ABA in fleshy fruit.</description><subject>Abscisic Acid - metabolism</subject><subject>Agriculture</subject><subject>Berries</subject><subject>Biological and medical sciences</subject><subject>Biomedical and Life Sciences</subject><subject>Carbohydrate Metabolism</subject><subject>Ecology</subject><subject>Forestry</subject><subject>Fruits</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Gene expression</subject><subject>Gene Expression Profiling</subject><subject>Gene expression regulation</subject><subject>Genes</subject><subject>Hormone action</subject><subject>Life Sciences</subject><subject>Nonclimacteric fruit</subject><subject>Original</subject><subject>Original Article</subject><subject>Phylogeny</subject><subject>Plant cells</subject><subject>Plant Sciences</subject><subject>Plants</subject><subject>Polymerase Chain Reaction</subject><subject>Ripening</subject><subject>Signal Transduction</subject><subject>Sugar</subject><subject>Sugars</subject><subject>Transcription factors</subject><subject>Vitis - genetics</subject><subject>Vitis - metabolism</subject><subject>Vitis - physiology</subject><subject>Vitis vinifera</subject><subject>Water deficit</subject><issn>0032-0935</issn><issn>1432-2048</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2010</creationdate><recordtype>article</recordtype><sourceid>C6C</sourceid><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><recordid>eNp9kU-LFDEQxYMo7uzqB_CgBkE8tVaS7k7nIsiy_oEFD-uePISaTNKToScZk-4Fv71petxRD0IgCe9Xryp5hDxj8JYByHcZoOZNBQwqxtqm4g_IitWCVxzq7iFZAZQzKNGckfOcdwBFlPIxOSs6SNl1K_L9ZuoxUQwbiutsfPaGovEbmn0fcPChpzGN2zjEPlNMtoijv8PRFn6k49bSGLIdaXQ0-YMNc4EPtE94sE_II4dDtk-P-wW5_Xj17fJzdf3105fLD9eVaRmMlVo7AfPiLUemOCqxLoJx0nBrG6ukcBtnuVMcVC032AiHAutOOVBdV4sL8n7xPUzrvd0YG8aEgz4kv8f0U0f0-m8l-K3u453mneTAeTF4czRI8cdk86j3Phs7DBhsnLKWQjBoWDu3evUPuYtTKh-VtYC6AEy0BWILZFLMOVl3PwoDPQenl-A0zPcSnJ5HePHnG-4rfidVgNdHALPBwSUMJa0Tx7tW1R0rHF-4XKTQ23Sa8H_dny9FuzzGdDIVQrFWiKK_XHSHUWOfSuPbGw5MAOvqWhXkF6gqwzs</recordid><startdate>20100601</startdate><enddate>20100601</enddate><creator>Gambetta, Gregory A</creator><creator>Matthews, Mark A</creator><creator>Shaghasi, Tarana H</creator><creator>McElrone, Andrew J</creator><creator>Castellarin, Simone D</creator><general>Berlin/Heidelberg : Springer-Verlag</general><general>Springer-Verlag</general><general>Springer</general><general>Springer Nature B.V</general><scope>FBQ</scope><scope>C6C</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QP</scope><scope>7QR</scope><scope>7TM</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20100601</creationdate><title>Sugar and abscisic acid signaling orthologs are activated at the onset of ripening in grape</title><author>Gambetta, Gregory A ; Matthews, Mark A ; Shaghasi, Tarana H ; McElrone, Andrew J ; Castellarin, Simone D</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c610t-9bf30f30f262a192a93b610cf7c2ee5e973fdfe2f920947da53fa3a489f098843</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2010</creationdate><topic>Abscisic Acid - metabolism</topic><topic>Agriculture</topic><topic>Berries</topic><topic>Biological and medical sciences</topic><topic>Biomedical and Life Sciences</topic><topic>Carbohydrate Metabolism</topic><topic>Ecology</topic><topic>Forestry</topic><topic>Fruits</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Gene expression</topic><topic>Gene Expression Profiling</topic><topic>Gene expression regulation</topic><topic>Genes</topic><topic>Hormone action</topic><topic>Life Sciences</topic><topic>Nonclimacteric fruit</topic><topic>Original</topic><topic>Original Article</topic><topic>Phylogeny</topic><topic>Plant cells</topic><topic>Plant Sciences</topic><topic>Plants</topic><topic>Polymerase Chain Reaction</topic><topic>Ripening</topic><topic>Signal Transduction</topic><topic>Sugar</topic><topic>Sugars</topic><topic>Transcription factors</topic><topic>Vitis - genetics</topic><topic>Vitis - metabolism</topic><topic>Vitis - physiology</topic><topic>Vitis vinifera</topic><topic>Water deficit</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Gambetta, Gregory A</creatorcontrib><creatorcontrib>Matthews, Mark A</creatorcontrib><creatorcontrib>Shaghasi, Tarana H</creatorcontrib><creatorcontrib>McElrone, Andrew J</creatorcontrib><creatorcontrib>Castellarin, Simone D</creatorcontrib><collection>AGRIS</collection><collection>Springer Nature OA Free Journals</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Chemoreception Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Agricultural Science Collection</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Agricultural Science Database</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Planta</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Gambetta, Gregory A</au><au>Matthews, Mark A</au><au>Shaghasi, Tarana H</au><au>McElrone, Andrew J</au><au>Castellarin, Simone D</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Sugar and abscisic acid signaling orthologs are activated at the onset of ripening in grape</atitle><jtitle>Planta</jtitle><stitle>Planta</stitle><addtitle>Planta</addtitle><date>2010-06-01</date><risdate>2010</risdate><volume>232</volume><issue>1</issue><spage>219</spage><epage>234</epage><pages>219-234</pages><issn>0032-0935</issn><eissn>1432-2048</eissn><coden>PLANAB</coden><abstract>The onset of ripening involves changes in sugar metabolism, softening, and color development. Most understanding of this process arises from work in climacteric fruits where the control of ripening is predominately by ethylene. However, many fruits such as grape are nonclimacteric, where the onset of ripening results from the integration of multiple hormone signals including sugars and abscisic acid (ABA). In this study, we identified ten orthologous gene families in Vitis vinifera containing components of sugar and ABA-signaling pathways elucidated in model systems, including PP2C protein phosphatases, and WRKY and homeobox transcription factors. Gene expression was characterized in control- and deficit-irrigated, field-grown Cabernet Sauvignon. Sixty-seven orthologous genes were identified, and 38 of these were expressed in berries. Of the genes expressed in berries, 68% were differentially expressed across development and/or in response to water deficit. Orthologs of several families were induced at the onset of ripening, and induced earlier and to higher levels in response to water deficit; patterns of expression that correlate with sugar and ABA accumulation during ripening. Similar to field-grown berries, ripening phenomena were induced in immature berries when cultured with sucrose and ABA, as evidenced by changes in color, softening, and gene expression. Finally, exogenous sucrose and ABA regulated key orthologs in culture, similar to their regulation in the field. This study identifies novel candidates in the control of nonclimacteric fruit ripening and demonstrates that grape orthologs of key sugar and ABA-signaling components are regulated by sugar and ABA in fleshy fruit.</abstract><cop>Berlin/Heidelberg</cop><pub>Berlin/Heidelberg : Springer-Verlag</pub><pmid>20407788</pmid><doi>10.1007/s00425-010-1165-2</doi><tpages>16</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Abscisic Acid - metabolism Agriculture Berries Biological and medical sciences Biomedical and Life Sciences Carbohydrate Metabolism Ecology Forestry Fruits Fundamental and applied biological sciences. Psychology Gene expression Gene Expression Profiling Gene expression regulation Genes Hormone action Life Sciences Nonclimacteric fruit Original Original Article Phylogeny Plant cells Plant Sciences Plants Polymerase Chain Reaction Ripening Signal Transduction Sugar Sugars Transcription factors Vitis - genetics Vitis - metabolism Vitis - physiology Vitis vinifera Water deficit |
title | Sugar and abscisic acid signaling orthologs are activated at the onset of ripening in grape |
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