Survival Prediction for Pancreatic Cancer Patients Receiving Gemcitabine Treatment
Although gemcitabine monotherapy is the standard treatment for advanced pancreatic cancer, patient outcome varies significantly, and a considerable number do not benefit adequately. We therefore searched for new biomarkers predictive of overall patient survival. Using LC-MS, we compared the base-lin...
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creator | Matsubara, Junichi Ono, Masaya Honda, Kazufumi Negishi, Ayako Ueno, Hideki Okusaka, Takuji Furuse, Junji Furuta, Koh Sugiyama, Emiko Saito, Yoshiro Kaniwa, Nahoko Sawada, Junichi Shoji, Ayako Sakuma, Tomohiro Chiba, Tsutomu Saijo, Nagahiro Hirohashi, Setsuo Yamada, Tesshi |
description | Although gemcitabine monotherapy is the standard treatment for advanced pancreatic cancer, patient outcome varies significantly, and a considerable number do not benefit adequately. We therefore searched for new biomarkers predictive of overall patient survival. Using LC-MS, we compared the base-line plasma proteome between 29 representative patients with advanced pancreatic cancer who died within 100 days and 31 patients who survived for more than 400 days after receiving at least two cycles of the same gemcitabine monotherapy. Identified biomarker candidates were then challenged in a larger cohort of 304 patients treated with the same protocol using reverse-phase protein microarray. Among a total of 45,277 peptide peaks, we identified 637 peaks whose intensities differed significantly between the two groups (p < 0.001, Welch's t test). Two MS peaks with the highest statistical significance (p = 2.6 × 10−4 and p = 5.0 × 10−4) were revealed to be derived from α1-antitrypsin and α1-antichymotrypsin, respectively. The levels of α1-antitrypsin (p = 8.9 × 10−8) and α1-antichymotrypsin (p = 0.001) were significantly correlated with the overall survival of the 304 patients. We selected α1-antitrypsin (p = 0.0001), leukocyte count (p = 0.066), alkaline phosphatase (p = 8.3 × 10−8), and performance status (p = 0.003) using multivariate Cox regression analysis and constructed a scoring system (nomogram) that was able to identify a group of high risk patients having a short median survival time of 150 days (95% confidence interval, 123–187 days; p = 2.0 × 10−15, log rank test). The accuracy of this model for prognostication was internally validated and showed good calibration and discrimination with a bootstrap-corrected concordance index of 0.672. In conclusion, an increased level of α1-antitrypsin is a biomarker that predicts short overall survival of patients with advanced pancreatic cancer receiving gemcitabine monotherapy. Although an external validation study will be necessary, the current model may be useful for identifying patients unsuitable for the standardized therapy. |
doi_str_mv | 10.1074/mcp.M900234-MCP200 |
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We therefore searched for new biomarkers predictive of overall patient survival. Using LC-MS, we compared the base-line plasma proteome between 29 representative patients with advanced pancreatic cancer who died within 100 days and 31 patients who survived for more than 400 days after receiving at least two cycles of the same gemcitabine monotherapy. Identified biomarker candidates were then challenged in a larger cohort of 304 patients treated with the same protocol using reverse-phase protein microarray. Among a total of 45,277 peptide peaks, we identified 637 peaks whose intensities differed significantly between the two groups (p < 0.001, Welch's t test). Two MS peaks with the highest statistical significance (p = 2.6 × 10−4 and p = 5.0 × 10−4) were revealed to be derived from α1-antitrypsin and α1-antichymotrypsin, respectively. The levels of α1-antitrypsin (p = 8.9 × 10−8) and α1-antichymotrypsin (p = 0.001) were significantly correlated with the overall survival of the 304 patients. We selected α1-antitrypsin (p = 0.0001), leukocyte count (p = 0.066), alkaline phosphatase (p = 8.3 × 10−8), and performance status (p = 0.003) using multivariate Cox regression analysis and constructed a scoring system (nomogram) that was able to identify a group of high risk patients having a short median survival time of 150 days (95% confidence interval, 123–187 days; p = 2.0 × 10−15, log rank test). The accuracy of this model for prognostication was internally validated and showed good calibration and discrimination with a bootstrap-corrected concordance index of 0.672. In conclusion, an increased level of α1-antitrypsin is a biomarker that predicts short overall survival of patients with advanced pancreatic cancer receiving gemcitabine monotherapy. Although an external validation study will be necessary, the current model may be useful for identifying patients unsuitable for the standardized therapy.</description><identifier>ISSN: 1535-9476</identifier><identifier>ISSN: 1535-9484</identifier><identifier>EISSN: 1535-9484</identifier><identifier>DOI: 10.1074/mcp.M900234-MCP200</identifier><identifier>PMID: 20061307</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Aged ; Antineoplastic Agents - therapeutic use ; Biomarkers, Tumor - isolation & purification ; Biomarkers, Tumor - metabolism ; Calibration ; Carcinoma, Pancreatic Ductal - diagnosis ; Carcinoma, Pancreatic Ductal - drug therapy ; Carcinoma, Pancreatic Ductal - metabolism ; Carcinoma, Pancreatic Ductal - mortality ; Deoxycytidine - analogs & derivatives ; Deoxycytidine - therapeutic use ; Early Detection of Cancer - methods ; Early Detection of Cancer - standards ; Female ; Gemcitabine ; Humans ; Male ; Middle Aged ; Neoplasm Proteins - analysis ; Neoplasm Proteins - isolation & purification ; Neoplasm Proteins - metabolism ; Pancreatic Neoplasms - diagnosis ; Pancreatic Neoplasms - drug therapy ; Pancreatic Neoplasms - metabolism ; Pancreatic Neoplasms - mortality ; Prognosis ; Retrospective Studies ; Survival Analysis</subject><ispartof>Molecular & cellular proteomics, 2010-04, Vol.9 (4), p.695-704</ispartof><rights>2010 © ASBMB. Currently published by Elsevier Inc; originally published by American Society for Biochemistry and Molecular Biology.</rights><rights>2010 by The American Society for Biochemistry and Molecular Biology, Inc.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c520t-74210558f5456a195e831885598c23428be05e416c3445123c7cdb7c27e25a23</citedby><cites>FETCH-LOGICAL-c520t-74210558f5456a195e831885598c23428be05e416c3445123c7cdb7c27e25a23</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2860233/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2860233/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,723,776,780,881,27901,27902,53766,53768</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/20061307$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Matsubara, Junichi</creatorcontrib><creatorcontrib>Ono, Masaya</creatorcontrib><creatorcontrib>Honda, Kazufumi</creatorcontrib><creatorcontrib>Negishi, Ayako</creatorcontrib><creatorcontrib>Ueno, Hideki</creatorcontrib><creatorcontrib>Okusaka, Takuji</creatorcontrib><creatorcontrib>Furuse, Junji</creatorcontrib><creatorcontrib>Furuta, Koh</creatorcontrib><creatorcontrib>Sugiyama, Emiko</creatorcontrib><creatorcontrib>Saito, Yoshiro</creatorcontrib><creatorcontrib>Kaniwa, Nahoko</creatorcontrib><creatorcontrib>Sawada, Junichi</creatorcontrib><creatorcontrib>Shoji, Ayako</creatorcontrib><creatorcontrib>Sakuma, Tomohiro</creatorcontrib><creatorcontrib>Chiba, Tsutomu</creatorcontrib><creatorcontrib>Saijo, Nagahiro</creatorcontrib><creatorcontrib>Hirohashi, Setsuo</creatorcontrib><creatorcontrib>Yamada, Tesshi</creatorcontrib><title>Survival Prediction for Pancreatic Cancer Patients Receiving Gemcitabine Treatment</title><title>Molecular & cellular proteomics</title><addtitle>Mol Cell Proteomics</addtitle><description>Although gemcitabine monotherapy is the standard treatment for advanced pancreatic cancer, patient outcome varies significantly, and a considerable number do not benefit adequately. We therefore searched for new biomarkers predictive of overall patient survival. Using LC-MS, we compared the base-line plasma proteome between 29 representative patients with advanced pancreatic cancer who died within 100 days and 31 patients who survived for more than 400 days after receiving at least two cycles of the same gemcitabine monotherapy. Identified biomarker candidates were then challenged in a larger cohort of 304 patients treated with the same protocol using reverse-phase protein microarray. Among a total of 45,277 peptide peaks, we identified 637 peaks whose intensities differed significantly between the two groups (p < 0.001, Welch's t test). Two MS peaks with the highest statistical significance (p = 2.6 × 10−4 and p = 5.0 × 10−4) were revealed to be derived from α1-antitrypsin and α1-antichymotrypsin, respectively. The levels of α1-antitrypsin (p = 8.9 × 10−8) and α1-antichymotrypsin (p = 0.001) were significantly correlated with the overall survival of the 304 patients. We selected α1-antitrypsin (p = 0.0001), leukocyte count (p = 0.066), alkaline phosphatase (p = 8.3 × 10−8), and performance status (p = 0.003) using multivariate Cox regression analysis and constructed a scoring system (nomogram) that was able to identify a group of high risk patients having a short median survival time of 150 days (95% confidence interval, 123–187 days; p = 2.0 × 10−15, log rank test). The accuracy of this model for prognostication was internally validated and showed good calibration and discrimination with a bootstrap-corrected concordance index of 0.672. In conclusion, an increased level of α1-antitrypsin is a biomarker that predicts short overall survival of patients with advanced pancreatic cancer receiving gemcitabine monotherapy. 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Ono, Masaya ; Honda, Kazufumi ; Negishi, Ayako ; Ueno, Hideki ; Okusaka, Takuji ; Furuse, Junji ; Furuta, Koh ; Sugiyama, Emiko ; Saito, Yoshiro ; Kaniwa, Nahoko ; Sawada, Junichi ; Shoji, Ayako ; Sakuma, Tomohiro ; Chiba, Tsutomu ; Saijo, Nagahiro ; Hirohashi, Setsuo ; Yamada, Tesshi</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c520t-74210558f5456a195e831885598c23428be05e416c3445123c7cdb7c27e25a23</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2010</creationdate><topic>Aged</topic><topic>Antineoplastic Agents - therapeutic use</topic><topic>Biomarkers, Tumor - isolation & purification</topic><topic>Biomarkers, Tumor - metabolism</topic><topic>Calibration</topic><topic>Carcinoma, Pancreatic Ductal - diagnosis</topic><topic>Carcinoma, Pancreatic Ductal - drug therapy</topic><topic>Carcinoma, Pancreatic Ductal - metabolism</topic><topic>Carcinoma, Pancreatic Ductal - mortality</topic><topic>Deoxycytidine - analogs & derivatives</topic><topic>Deoxycytidine - therapeutic use</topic><topic>Early Detection of Cancer - methods</topic><topic>Early Detection of Cancer - standards</topic><topic>Female</topic><topic>Gemcitabine</topic><topic>Humans</topic><topic>Male</topic><topic>Middle Aged</topic><topic>Neoplasm Proteins - analysis</topic><topic>Neoplasm Proteins - isolation & purification</topic><topic>Neoplasm Proteins - metabolism</topic><topic>Pancreatic Neoplasms - diagnosis</topic><topic>Pancreatic Neoplasms - drug therapy</topic><topic>Pancreatic Neoplasms - metabolism</topic><topic>Pancreatic Neoplasms - mortality</topic><topic>Prognosis</topic><topic>Retrospective Studies</topic><topic>Survival Analysis</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Matsubara, Junichi</creatorcontrib><creatorcontrib>Ono, Masaya</creatorcontrib><creatorcontrib>Honda, Kazufumi</creatorcontrib><creatorcontrib>Negishi, Ayako</creatorcontrib><creatorcontrib>Ueno, Hideki</creatorcontrib><creatorcontrib>Okusaka, Takuji</creatorcontrib><creatorcontrib>Furuse, Junji</creatorcontrib><creatorcontrib>Furuta, Koh</creatorcontrib><creatorcontrib>Sugiyama, Emiko</creatorcontrib><creatorcontrib>Saito, Yoshiro</creatorcontrib><creatorcontrib>Kaniwa, Nahoko</creatorcontrib><creatorcontrib>Sawada, Junichi</creatorcontrib><creatorcontrib>Shoji, Ayako</creatorcontrib><creatorcontrib>Sakuma, Tomohiro</creatorcontrib><creatorcontrib>Chiba, Tsutomu</creatorcontrib><creatorcontrib>Saijo, Nagahiro</creatorcontrib><creatorcontrib>Hirohashi, Setsuo</creatorcontrib><creatorcontrib>Yamada, Tesshi</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Molecular & cellular proteomics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Matsubara, Junichi</au><au>Ono, Masaya</au><au>Honda, Kazufumi</au><au>Negishi, Ayako</au><au>Ueno, Hideki</au><au>Okusaka, Takuji</au><au>Furuse, Junji</au><au>Furuta, Koh</au><au>Sugiyama, Emiko</au><au>Saito, Yoshiro</au><au>Kaniwa, Nahoko</au><au>Sawada, Junichi</au><au>Shoji, Ayako</au><au>Sakuma, Tomohiro</au><au>Chiba, Tsutomu</au><au>Saijo, Nagahiro</au><au>Hirohashi, Setsuo</au><au>Yamada, Tesshi</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Survival Prediction for Pancreatic Cancer Patients Receiving Gemcitabine Treatment</atitle><jtitle>Molecular & cellular proteomics</jtitle><addtitle>Mol Cell Proteomics</addtitle><date>2010-04-01</date><risdate>2010</risdate><volume>9</volume><issue>4</issue><spage>695</spage><epage>704</epage><pages>695-704</pages><issn>1535-9476</issn><issn>1535-9484</issn><eissn>1535-9484</eissn><abstract>Although gemcitabine monotherapy is the standard treatment for advanced pancreatic cancer, patient outcome varies significantly, and a considerable number do not benefit adequately. We therefore searched for new biomarkers predictive of overall patient survival. Using LC-MS, we compared the base-line plasma proteome between 29 representative patients with advanced pancreatic cancer who died within 100 days and 31 patients who survived for more than 400 days after receiving at least two cycles of the same gemcitabine monotherapy. Identified biomarker candidates were then challenged in a larger cohort of 304 patients treated with the same protocol using reverse-phase protein microarray. Among a total of 45,277 peptide peaks, we identified 637 peaks whose intensities differed significantly between the two groups (p < 0.001, Welch's t test). Two MS peaks with the highest statistical significance (p = 2.6 × 10−4 and p = 5.0 × 10−4) were revealed to be derived from α1-antitrypsin and α1-antichymotrypsin, respectively. The levels of α1-antitrypsin (p = 8.9 × 10−8) and α1-antichymotrypsin (p = 0.001) were significantly correlated with the overall survival of the 304 patients. We selected α1-antitrypsin (p = 0.0001), leukocyte count (p = 0.066), alkaline phosphatase (p = 8.3 × 10−8), and performance status (p = 0.003) using multivariate Cox regression analysis and constructed a scoring system (nomogram) that was able to identify a group of high risk patients having a short median survival time of 150 days (95% confidence interval, 123–187 days; p = 2.0 × 10−15, log rank test). The accuracy of this model for prognostication was internally validated and showed good calibration and discrimination with a bootstrap-corrected concordance index of 0.672. In conclusion, an increased level of α1-antitrypsin is a biomarker that predicts short overall survival of patients with advanced pancreatic cancer receiving gemcitabine monotherapy. Although an external validation study will be necessary, the current model may be useful for identifying patients unsuitable for the standardized therapy.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>20061307</pmid><doi>10.1074/mcp.M900234-MCP200</doi><tpages>10</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Aged Antineoplastic Agents - therapeutic use Biomarkers, Tumor - isolation & purification Biomarkers, Tumor - metabolism Calibration Carcinoma, Pancreatic Ductal - diagnosis Carcinoma, Pancreatic Ductal - drug therapy Carcinoma, Pancreatic Ductal - metabolism Carcinoma, Pancreatic Ductal - mortality Deoxycytidine - analogs & derivatives Deoxycytidine - therapeutic use Early Detection of Cancer - methods Early Detection of Cancer - standards Female Gemcitabine Humans Male Middle Aged Neoplasm Proteins - analysis Neoplasm Proteins - isolation & purification Neoplasm Proteins - metabolism Pancreatic Neoplasms - diagnosis Pancreatic Neoplasms - drug therapy Pancreatic Neoplasms - metabolism Pancreatic Neoplasms - mortality Prognosis Retrospective Studies Survival Analysis |
title | Survival Prediction for Pancreatic Cancer Patients Receiving Gemcitabine Treatment |
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