Spectroscopic characterization of the oxyferrous complex of prostacyclin synthase in solution and in trapped sol–gel matrix
Prostacyclin synthase (PGIS) is a member of the cytochrome P450 family in which the oxyferrous complexes are generally labile in the absence of substrate. At 4 °C, the on‐rate constants and off‐rate constants of oxygen binding to PGIS in solution are 5.9 × 105 m−1·s−1 and 29 s−1, respectively. The o...
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description | Prostacyclin synthase (PGIS) is a member of the cytochrome P450 family in which the oxyferrous complexes are generally labile in the absence of substrate. At 4 °C, the on‐rate constants and off‐rate constants of oxygen binding to PGIS in solution are 5.9 × 105 m−1·s−1 and 29 s−1, respectively. The oxyferrous complex decays to a ferric form at a rate of 12 s−1. We report, for the first time, a stable oxyferrous complex of PGIS in a transparent sol–gel monolith. The encapsulated ferric PGIS retained the same spectroscopic features as in solution. The binding capabilities of the encapsulated PGIS were demonstrated by spectral changes upon the addition of O‐based, N‐based and C‐based ligands. The peroxidase activity of PGIS in sol–gel was three orders of magnitude slower than that in solution owing to the restricted diffusion of the substrate in sol–gel. The oxyferrous complex in sol–gel was observable for 24 h at room temperature and displayed a much red‐shifted Soret peak. Stabilization of the ferrous–carbon monoxide complex in sol–gel was observed as an enrichment of the 450‐nm species over the 420‐nm species. This result suggests that the sol–gel method may be applied to other P450s to generate a stable intermediate in the di‐oxygen activation. |
doi_str_mv | 10.1111/j.1742-4658.2008.06385.x |
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At 4 °C, the on‐rate constants and off‐rate constants of oxygen binding to PGIS in solution are 5.9 × 105 m−1·s−1 and 29 s−1, respectively. The oxyferrous complex decays to a ferric form at a rate of 12 s−1. We report, for the first time, a stable oxyferrous complex of PGIS in a transparent sol–gel monolith. The encapsulated ferric PGIS retained the same spectroscopic features as in solution. The binding capabilities of the encapsulated PGIS were demonstrated by spectral changes upon the addition of O‐based, N‐based and C‐based ligands. The peroxidase activity of PGIS in sol–gel was three orders of magnitude slower than that in solution owing to the restricted diffusion of the substrate in sol–gel. The oxyferrous complex in sol–gel was observable for 24 h at room temperature and displayed a much red‐shifted Soret peak. Stabilization of the ferrous–carbon monoxide complex in sol–gel was observed as an enrichment of the 450‐nm species over the 420‐nm species. This result suggests that the sol–gel method may be applied to other P450s to generate a stable intermediate in the di‐oxygen activation.</description><identifier>ISSN: 1742-464X</identifier><identifier>EISSN: 1742-4658</identifier><identifier>DOI: 10.1111/j.1742-4658.2008.06385.x</identifier><identifier>PMID: 18397321</identifier><language>eng</language><publisher>Oxford, UK: Blackwell Publishing Ltd</publisher><subject>Binding sites ; Biochemistry ; Cytochrome P-450 Enzyme System - genetics ; Cytochrome P-450 Enzyme System - metabolism ; cytochrome P450 ; eicosanoid ; encapsulation ; Extracellular Matrix - chemistry ; Ferrous Compounds - chemistry ; Ferrous Compounds - metabolism ; intermediate trapping ; Intramolecular Oxidoreductases - genetics ; Intramolecular Oxidoreductases - metabolism ; Kinetics ; Ligands ; Oxidation-Reduction ; Oxygen - chemistry ; Oxygen - metabolism ; Phase Transition ; Protein Structure, Tertiary ; Recombinant Proteins - isolation & purification ; Recombinant Proteins - metabolism ; Research methodology ; Solutions ; Spectrophotometry, Ultraviolet ; Spectrum analysis ; Substrates</subject><ispartof>The FEBS journal, 2008-05, Vol.275 (9), p.2305-2314</ispartof><rights>2008 The Authors Journal compilation © 2008 FEBS</rights><rights>Journal compilation © 2008 Federation of European Biochemical Societies</rights><rights>2008 The Authors Journal compilation © 2008 FEBS 2008</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c5005-24a741c70b8b0b04157d635dd0a93da7bf7598bea90df16209d7385c82dbaf733</citedby><cites>FETCH-LOGICAL-c5005-24a741c70b8b0b04157d635dd0a93da7bf7598bea90df16209d7385c82dbaf733</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1111%2Fj.1742-4658.2008.06385.x$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1111%2Fj.1742-4658.2008.06385.x$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>230,314,776,780,881,1411,1427,27901,27902,45550,45551,46384,46808</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/18397321$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Yeh, Hui‐Chun</creatorcontrib><creatorcontrib>Hsu, Pei‐Yung</creatorcontrib><creatorcontrib>Tsai, Ah‐Lim</creatorcontrib><creatorcontrib>Wang, Lee‐Ho</creatorcontrib><title>Spectroscopic characterization of the oxyferrous complex of prostacyclin synthase in solution and in trapped sol–gel matrix</title><title>The FEBS journal</title><addtitle>FEBS J</addtitle><description>Prostacyclin synthase (PGIS) is a member of the cytochrome P450 family in which the oxyferrous complexes are generally labile in the absence of substrate. At 4 °C, the on‐rate constants and off‐rate constants of oxygen binding to PGIS in solution are 5.9 × 105 m−1·s−1 and 29 s−1, respectively. The oxyferrous complex decays to a ferric form at a rate of 12 s−1. We report, for the first time, a stable oxyferrous complex of PGIS in a transparent sol–gel monolith. The encapsulated ferric PGIS retained the same spectroscopic features as in solution. The binding capabilities of the encapsulated PGIS were demonstrated by spectral changes upon the addition of O‐based, N‐based and C‐based ligands. The peroxidase activity of PGIS in sol–gel was three orders of magnitude slower than that in solution owing to the restricted diffusion of the substrate in sol–gel. The oxyferrous complex in sol–gel was observable for 24 h at room temperature and displayed a much red‐shifted Soret peak. Stabilization of the ferrous–carbon monoxide complex in sol–gel was observed as an enrichment of the 450‐nm species over the 420‐nm species. This result suggests that the sol–gel method may be applied to other P450s to generate a stable intermediate in the di‐oxygen activation.</description><subject>Binding sites</subject><subject>Biochemistry</subject><subject>Cytochrome P-450 Enzyme System - genetics</subject><subject>Cytochrome P-450 Enzyme System - metabolism</subject><subject>cytochrome P450</subject><subject>eicosanoid</subject><subject>encapsulation</subject><subject>Extracellular Matrix - chemistry</subject><subject>Ferrous Compounds - chemistry</subject><subject>Ferrous Compounds - metabolism</subject><subject>intermediate trapping</subject><subject>Intramolecular Oxidoreductases - genetics</subject><subject>Intramolecular Oxidoreductases - metabolism</subject><subject>Kinetics</subject><subject>Ligands</subject><subject>Oxidation-Reduction</subject><subject>Oxygen - chemistry</subject><subject>Oxygen - metabolism</subject><subject>Phase Transition</subject><subject>Protein Structure, Tertiary</subject><subject>Recombinant Proteins - isolation & purification</subject><subject>Recombinant Proteins - metabolism</subject><subject>Research methodology</subject><subject>Solutions</subject><subject>Spectrophotometry, Ultraviolet</subject><subject>Spectrum analysis</subject><subject>Substrates</subject><issn>1742-464X</issn><issn>1742-4658</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2008</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNUctu1DAUtRCIloFfQBELdhP8iGNngwRVC0iVWBQkdpZjOx2PnDjYCSRISPwDf8iXYLejKbDCG1_7nnN07zkAFAiWKJ0X-xKxCm-rmvISQ8hLWBNOy-UeOD027h_r6tMJeBTjHkJCq6Z5CE4QJw0jGJ2C71ejUVPwUfnRqkLtZJBqMsF-k5P1Q-G7YtqZwi9rZ0LwcyyU70dnltwZE2-SalXODkVch2knoyly7d18Q5eDzu8pyHE0Ov__-vHz2riil1Owy2PwoJMumieHewM-Xpx_OHu7vXz_5t3Zq8utohDSLa4kq5BisOUtbGGFKNM1oVpD2RAtWdsx2vDWyAbqDtUYNpolPxTHupUdI2QDXt7qjnPbG63MkCZyYgy2l2EVXlrxd2ewO3HtvwjMKcLJ3A14fhAI_vNs4iR6G5VxTg4mmSLqBhHEeQY--we493MY0nICp8ExSbYnEL8FqWRgDKY7ToKgyAGLvcjZiZyjyAGLm4DFkqhP_9zkjnhI9G7Vr9aZ9b-FxcX566tckt8fFbnc</recordid><startdate>200805</startdate><enddate>200805</enddate><creator>Yeh, Hui‐Chun</creator><creator>Hsu, Pei‐Yung</creator><creator>Tsai, Ah‐Lim</creator><creator>Wang, Lee‐Ho</creator><general>Blackwell Publishing Ltd</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7QP</scope><scope>7QR</scope><scope>7TK</scope><scope>7TM</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>200805</creationdate><title>Spectroscopic characterization of the oxyferrous complex of prostacyclin synthase in solution and in trapped sol–gel matrix</title><author>Yeh, Hui‐Chun ; Hsu, Pei‐Yung ; Tsai, Ah‐Lim ; Wang, Lee‐Ho</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5005-24a741c70b8b0b04157d635dd0a93da7bf7598bea90df16209d7385c82dbaf733</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2008</creationdate><topic>Binding sites</topic><topic>Biochemistry</topic><topic>Cytochrome P-450 Enzyme System - genetics</topic><topic>Cytochrome P-450 Enzyme System - metabolism</topic><topic>cytochrome P450</topic><topic>eicosanoid</topic><topic>encapsulation</topic><topic>Extracellular Matrix - chemistry</topic><topic>Ferrous Compounds - chemistry</topic><topic>Ferrous Compounds - metabolism</topic><topic>intermediate trapping</topic><topic>Intramolecular Oxidoreductases - genetics</topic><topic>Intramolecular Oxidoreductases - metabolism</topic><topic>Kinetics</topic><topic>Ligands</topic><topic>Oxidation-Reduction</topic><topic>Oxygen - chemistry</topic><topic>Oxygen - metabolism</topic><topic>Phase Transition</topic><topic>Protein Structure, Tertiary</topic><topic>Recombinant Proteins - isolation & purification</topic><topic>Recombinant Proteins - metabolism</topic><topic>Research methodology</topic><topic>Solutions</topic><topic>Spectrophotometry, Ultraviolet</topic><topic>Spectrum analysis</topic><topic>Substrates</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Yeh, Hui‐Chun</creatorcontrib><creatorcontrib>Hsu, Pei‐Yung</creatorcontrib><creatorcontrib>Tsai, Ah‐Lim</creatorcontrib><creatorcontrib>Wang, Lee‐Ho</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Chemoreception Abstracts</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>The FEBS journal</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Yeh, Hui‐Chun</au><au>Hsu, Pei‐Yung</au><au>Tsai, Ah‐Lim</au><au>Wang, Lee‐Ho</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Spectroscopic characterization of the oxyferrous complex of prostacyclin synthase in solution and in trapped sol–gel matrix</atitle><jtitle>The FEBS journal</jtitle><addtitle>FEBS J</addtitle><date>2008-05</date><risdate>2008</risdate><volume>275</volume><issue>9</issue><spage>2305</spage><epage>2314</epage><pages>2305-2314</pages><issn>1742-464X</issn><eissn>1742-4658</eissn><abstract>Prostacyclin synthase (PGIS) is a member of the cytochrome P450 family in which the oxyferrous complexes are generally labile in the absence of substrate. At 4 °C, the on‐rate constants and off‐rate constants of oxygen binding to PGIS in solution are 5.9 × 105 m−1·s−1 and 29 s−1, respectively. The oxyferrous complex decays to a ferric form at a rate of 12 s−1. We report, for the first time, a stable oxyferrous complex of PGIS in a transparent sol–gel monolith. The encapsulated ferric PGIS retained the same spectroscopic features as in solution. The binding capabilities of the encapsulated PGIS were demonstrated by spectral changes upon the addition of O‐based, N‐based and C‐based ligands. The peroxidase activity of PGIS in sol–gel was three orders of magnitude slower than that in solution owing to the restricted diffusion of the substrate in sol–gel. The oxyferrous complex in sol–gel was observable for 24 h at room temperature and displayed a much red‐shifted Soret peak. Stabilization of the ferrous–carbon monoxide complex in sol–gel was observed as an enrichment of the 450‐nm species over the 420‐nm species. This result suggests that the sol–gel method may be applied to other P450s to generate a stable intermediate in the di‐oxygen activation.</abstract><cop>Oxford, UK</cop><pub>Blackwell Publishing Ltd</pub><pmid>18397321</pmid><doi>10.1111/j.1742-4658.2008.06385.x</doi><tpages>10</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Binding sites Biochemistry Cytochrome P-450 Enzyme System - genetics Cytochrome P-450 Enzyme System - metabolism cytochrome P450 eicosanoid encapsulation Extracellular Matrix - chemistry Ferrous Compounds - chemistry Ferrous Compounds - metabolism intermediate trapping Intramolecular Oxidoreductases - genetics Intramolecular Oxidoreductases - metabolism Kinetics Ligands Oxidation-Reduction Oxygen - chemistry Oxygen - metabolism Phase Transition Protein Structure, Tertiary Recombinant Proteins - isolation & purification Recombinant Proteins - metabolism Research methodology Solutions Spectrophotometry, Ultraviolet Spectrum analysis Substrates |
title | Spectroscopic characterization of the oxyferrous complex of prostacyclin synthase in solution and in trapped sol–gel matrix |
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