Modulation of the heme electronic structure and cystathionine β-synthase activity by second coordination sphere ligands: The role of heme ligand switching in redox regulation
In humans, cystathionine β-synthase (CBS) is a hemeprotein, which catalyzes a pyridoxal phosphate (PLP)-dependent condensation reaction. Changes in the heme environment are communicated to the active site, which is ∼20 Å away. In this study, we have examined the role of H67 and R266, which are in th...
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creator | Singh, Sangita Madzelan, Peter Stasser, Jay Weeks, Colin L. Becker, Donald Spiro, Thomas G. Penner-Hahn, James Banerjee, Ruma |
description | In humans, cystathionine β-synthase (CBS) is a hemeprotein, which catalyzes a pyridoxal phosphate (PLP)-dependent condensation reaction. Changes in the heme environment are communicated to the active site, which is ∼20
Å away. In this study, we have examined the role of H67 and R266, which are in the second coordination sphere of the heme ligands, H65 and C52, respectively, in modulating the heme’s electronic properties and in transmitting information between the heme and active sites. While the H67A mutation is comparable to wild-type CBS, interesting differences are revealed by mutations at the R266 site. The pathogenic mutant, R266K, is moderately PLP-responsive while the R266M mutation shows dramatic differences in the ferrous state. The electrostatic interaction between C52 and R266 is critical for stabilizing the ferrous heme and its disruption leads to the facile formation of a 424
nm (C-424) absorbing ferrous species, which is inactive, compared to the active 449
nm ferrous species for wild-type CBS. Resonance Raman studies on the R266M mutant reveal that the kinetics of C52 rebinding after Fe–CO photolysis are comparable to that of wild-type CBS. EXAFS studies on C-424 CBS are consistent with the presence of two axial N/O low Z scatters with only one being a rigid unit of a histidine residue while the other could be a solvent molecule, an oxygen atom from the peptide backbone or a side chain nitrogen. The redox potential for the heme in full-length CBS is −350
±
4
mV and is substantially lower than the value of −287
±
2
mV determined for truncated CBS. A redox-regulated ligand change has the potential to serve as an allosteric on/off switch in human CBS and the second sphere ligand, R266, plays an important role in this transition. |
doi_str_mv | 10.1016/j.jinorgbio.2009.01.009 |
format | Article |
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Å away. In this study, we have examined the role of H67 and R266, which are in the second coordination sphere of the heme ligands, H65 and C52, respectively, in modulating the heme’s electronic properties and in transmitting information between the heme and active sites. While the H67A mutation is comparable to wild-type CBS, interesting differences are revealed by mutations at the R266 site. The pathogenic mutant, R266K, is moderately PLP-responsive while the R266M mutation shows dramatic differences in the ferrous state. The electrostatic interaction between C52 and R266 is critical for stabilizing the ferrous heme and its disruption leads to the facile formation of a 424
nm (C-424) absorbing ferrous species, which is inactive, compared to the active 449
nm ferrous species for wild-type CBS. Resonance Raman studies on the R266M mutant reveal that the kinetics of C52 rebinding after Fe–CO photolysis are comparable to that of wild-type CBS. EXAFS studies on C-424 CBS are consistent with the presence of two axial N/O low Z scatters with only one being a rigid unit of a histidine residue while the other could be a solvent molecule, an oxygen atom from the peptide backbone or a side chain nitrogen. The redox potential for the heme in full-length CBS is −350
±
4
mV and is substantially lower than the value of −287
±
2
mV determined for truncated CBS. A redox-regulated ligand change has the potential to serve as an allosteric on/off switch in human CBS and the second sphere ligand, R266, plays an important role in this transition.</description><identifier>ISSN: 0162-0134</identifier><identifier>EISSN: 1873-3344</identifier><identifier>DOI: 10.1016/j.jinorgbio.2009.01.009</identifier><identifier>PMID: 19232736</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Binding Sites - genetics ; Cystathionine beta-synthase ; Cystathionine beta-Synthase - chemistry ; Cystathionine beta-Synthase - genetics ; Cystathionine beta-Synthase - metabolism ; EXAFS ; Heme ; Heme - chemistry ; Heme - metabolism ; Humans ; Hydrogen-Ion Concentration ; Kinetics ; Models, Molecular ; Mutation ; Oxidation-Reduction ; Protein Binding - genetics ; Resonance Raman spectroscopy ; Spectrum Analysis, Raman ; Static Electricity ; Structure-Activity Relationship</subject><ispartof>Journal of inorganic biochemistry, 2009-05, Vol.103 (5), p.689-697</ispartof><rights>2009</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c473t-58d6e3e5c4a37285d1fb99b2a7364561149546cc2948d9e96be9bf3a3f49b303</citedby><cites>FETCH-LOGICAL-c473t-58d6e3e5c4a37285d1fb99b2a7364561149546cc2948d9e96be9bf3a3f49b303</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0162013409000154$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>230,314,776,780,881,3537,27901,27902,65306</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/19232736$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Singh, Sangita</creatorcontrib><creatorcontrib>Madzelan, Peter</creatorcontrib><creatorcontrib>Stasser, Jay</creatorcontrib><creatorcontrib>Weeks, Colin L.</creatorcontrib><creatorcontrib>Becker, Donald</creatorcontrib><creatorcontrib>Spiro, Thomas G.</creatorcontrib><creatorcontrib>Penner-Hahn, James</creatorcontrib><creatorcontrib>Banerjee, Ruma</creatorcontrib><title>Modulation of the heme electronic structure and cystathionine β-synthase activity by second coordination sphere ligands: The role of heme ligand switching in redox regulation</title><title>Journal of inorganic biochemistry</title><addtitle>J Inorg Biochem</addtitle><description>In humans, cystathionine β-synthase (CBS) is a hemeprotein, which catalyzes a pyridoxal phosphate (PLP)-dependent condensation reaction. Changes in the heme environment are communicated to the active site, which is ∼20
Å away. In this study, we have examined the role of H67 and R266, which are in the second coordination sphere of the heme ligands, H65 and C52, respectively, in modulating the heme’s electronic properties and in transmitting information between the heme and active sites. While the H67A mutation is comparable to wild-type CBS, interesting differences are revealed by mutations at the R266 site. The pathogenic mutant, R266K, is moderately PLP-responsive while the R266M mutation shows dramatic differences in the ferrous state. The electrostatic interaction between C52 and R266 is critical for stabilizing the ferrous heme and its disruption leads to the facile formation of a 424
nm (C-424) absorbing ferrous species, which is inactive, compared to the active 449
nm ferrous species for wild-type CBS. Resonance Raman studies on the R266M mutant reveal that the kinetics of C52 rebinding after Fe–CO photolysis are comparable to that of wild-type CBS. EXAFS studies on C-424 CBS are consistent with the presence of two axial N/O low Z scatters with only one being a rigid unit of a histidine residue while the other could be a solvent molecule, an oxygen atom from the peptide backbone or a side chain nitrogen. The redox potential for the heme in full-length CBS is −350
±
4
mV and is substantially lower than the value of −287
±
2
mV determined for truncated CBS. A redox-regulated ligand change has the potential to serve as an allosteric on/off switch in human CBS and the second sphere ligand, R266, plays an important role in this transition.</description><subject>Binding Sites - genetics</subject><subject>Cystathionine beta-synthase</subject><subject>Cystathionine beta-Synthase - chemistry</subject><subject>Cystathionine beta-Synthase - genetics</subject><subject>Cystathionine beta-Synthase - metabolism</subject><subject>EXAFS</subject><subject>Heme</subject><subject>Heme - chemistry</subject><subject>Heme - metabolism</subject><subject>Humans</subject><subject>Hydrogen-Ion Concentration</subject><subject>Kinetics</subject><subject>Models, Molecular</subject><subject>Mutation</subject><subject>Oxidation-Reduction</subject><subject>Protein Binding - genetics</subject><subject>Resonance Raman spectroscopy</subject><subject>Spectrum Analysis, Raman</subject><subject>Static Electricity</subject><subject>Structure-Activity Relationship</subject><issn>0162-0134</issn><issn>1873-3344</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2009</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkcGO0zAQhi0EYkvhFcAnbgl27CQ1B6TVigWkRVx6txx7krhK7WI7hT4VEg_CM61LqgVOXDyH-eb_x_Mj9IqSkhLavNmVO-t8GDrry4oQURJa5vIIreimZQVjnD9Gq0xWBaGMX6FnMe4IIXXN26foioqKVS1rVujHZ2_mSSXrHfY9TiPgEfaAYQKdgndW45jCrNMcACtnsD7FpNKYeesA__pZxJNLo4q5q5M92nTC3QlH0P4Mex-MdYt8PIyQRSY7ZJ34Fm-zV_ATnH1_ey4dHL_ZpEfrBmwdDmD89_wOlyWfoye9miK8uNQ12t6-3958LO6-fPh0c31XaN6yVNQb0wCDWnPF2mpTG9p3QnSVyp_mdUMpFzVvtK4E3xgBoulAdD1TrOeiY4St0btF9jB3ezAaXApqkodg9yqcpFdW_ttxdpSDP8qqbSuSr7tGry8CwX-dISa5t1HDNCkHfo6yaSknrKUZbBdQBx9jgP7BhBJ5zlru5EPW8py1JFTmkidf_r3jn7lLuBm4XgDIhzpaCDJqC06DsSGnK423_zW5B0JuxmM</recordid><startdate>20090501</startdate><enddate>20090501</enddate><creator>Singh, Sangita</creator><creator>Madzelan, Peter</creator><creator>Stasser, Jay</creator><creator>Weeks, Colin L.</creator><creator>Becker, Donald</creator><creator>Spiro, Thomas G.</creator><creator>Penner-Hahn, James</creator><creator>Banerjee, Ruma</creator><general>Elsevier Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20090501</creationdate><title>Modulation of the heme electronic structure and cystathionine β-synthase activity by second coordination sphere ligands: The role of heme ligand switching in redox regulation</title><author>Singh, Sangita ; Madzelan, Peter ; Stasser, Jay ; Weeks, Colin L. ; Becker, Donald ; Spiro, Thomas G. ; Penner-Hahn, James ; Banerjee, Ruma</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c473t-58d6e3e5c4a37285d1fb99b2a7364561149546cc2948d9e96be9bf3a3f49b303</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2009</creationdate><topic>Binding Sites - genetics</topic><topic>Cystathionine beta-synthase</topic><topic>Cystathionine beta-Synthase - chemistry</topic><topic>Cystathionine beta-Synthase - genetics</topic><topic>Cystathionine beta-Synthase - metabolism</topic><topic>EXAFS</topic><topic>Heme</topic><topic>Heme - chemistry</topic><topic>Heme - metabolism</topic><topic>Humans</topic><topic>Hydrogen-Ion Concentration</topic><topic>Kinetics</topic><topic>Models, Molecular</topic><topic>Mutation</topic><topic>Oxidation-Reduction</topic><topic>Protein Binding - genetics</topic><topic>Resonance Raman spectroscopy</topic><topic>Spectrum Analysis, Raman</topic><topic>Static Electricity</topic><topic>Structure-Activity Relationship</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Singh, Sangita</creatorcontrib><creatorcontrib>Madzelan, Peter</creatorcontrib><creatorcontrib>Stasser, Jay</creatorcontrib><creatorcontrib>Weeks, Colin L.</creatorcontrib><creatorcontrib>Becker, Donald</creatorcontrib><creatorcontrib>Spiro, Thomas G.</creatorcontrib><creatorcontrib>Penner-Hahn, James</creatorcontrib><creatorcontrib>Banerjee, Ruma</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Journal of inorganic biochemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Singh, Sangita</au><au>Madzelan, Peter</au><au>Stasser, Jay</au><au>Weeks, Colin L.</au><au>Becker, Donald</au><au>Spiro, Thomas G.</au><au>Penner-Hahn, James</au><au>Banerjee, Ruma</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Modulation of the heme electronic structure and cystathionine β-synthase activity by second coordination sphere ligands: The role of heme ligand switching in redox regulation</atitle><jtitle>Journal of inorganic biochemistry</jtitle><addtitle>J Inorg Biochem</addtitle><date>2009-05-01</date><risdate>2009</risdate><volume>103</volume><issue>5</issue><spage>689</spage><epage>697</epage><pages>689-697</pages><issn>0162-0134</issn><eissn>1873-3344</eissn><abstract>In humans, cystathionine β-synthase (CBS) is a hemeprotein, which catalyzes a pyridoxal phosphate (PLP)-dependent condensation reaction. Changes in the heme environment are communicated to the active site, which is ∼20
Å away. In this study, we have examined the role of H67 and R266, which are in the second coordination sphere of the heme ligands, H65 and C52, respectively, in modulating the heme’s electronic properties and in transmitting information between the heme and active sites. While the H67A mutation is comparable to wild-type CBS, interesting differences are revealed by mutations at the R266 site. The pathogenic mutant, R266K, is moderately PLP-responsive while the R266M mutation shows dramatic differences in the ferrous state. The electrostatic interaction between C52 and R266 is critical for stabilizing the ferrous heme and its disruption leads to the facile formation of a 424
nm (C-424) absorbing ferrous species, which is inactive, compared to the active 449
nm ferrous species for wild-type CBS. Resonance Raman studies on the R266M mutant reveal that the kinetics of C52 rebinding after Fe–CO photolysis are comparable to that of wild-type CBS. EXAFS studies on C-424 CBS are consistent with the presence of two axial N/O low Z scatters with only one being a rigid unit of a histidine residue while the other could be a solvent molecule, an oxygen atom from the peptide backbone or a side chain nitrogen. The redox potential for the heme in full-length CBS is −350
±
4
mV and is substantially lower than the value of −287
±
2
mV determined for truncated CBS. A redox-regulated ligand change has the potential to serve as an allosteric on/off switch in human CBS and the second sphere ligand, R266, plays an important role in this transition.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>19232736</pmid><doi>10.1016/j.jinorgbio.2009.01.009</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Binding Sites - genetics Cystathionine beta-synthase Cystathionine beta-Synthase - chemistry Cystathionine beta-Synthase - genetics Cystathionine beta-Synthase - metabolism EXAFS Heme Heme - chemistry Heme - metabolism Humans Hydrogen-Ion Concentration Kinetics Models, Molecular Mutation Oxidation-Reduction Protein Binding - genetics Resonance Raman spectroscopy Spectrum Analysis, Raman Static Electricity Structure-Activity Relationship |
title | Modulation of the heme electronic structure and cystathionine β-synthase activity by second coordination sphere ligands: The role of heme ligand switching in redox regulation |
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