Tissue-specific expression of the PNZIP promoter is mediated by combinatorial interaction of different cis-elements and a novel transcriptional factor
Recent studies demonstrated that PNZIP and its homologs encode a special cyclase and play an important role in chlorophyll biosynthesis in higher plants. To investigate the molecular mechanism governing the PNZIP gene, the PNZIP promoter was isolated and analyzed. Deletion analysis indicated that G-...
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description | Recent studies demonstrated that PNZIP and its homologs encode a special cyclase and play an important role in chlorophyll biosynthesis in higher plants. To investigate the molecular mechanism governing the PNZIP gene, the PNZIP promoter was isolated and analyzed. Deletion analysis indicated that G-box is an important element in the regulation of the reporter gene expression. Further mutation assay demonstrated that G-box and GATACT elements are necessary and sufficient for the high and tissue-specific expression of the GUS gene. Using yeast one-hybrid screening, we have isolated a novel tobacco bZIP protein, NtbZIP, which can specifically recognize the G-box of the PNZIP promoter. The NtbZIP protein shares a limited amino acid homology to Arabidopsis ABI5 and AtAREB1 and very low homology to other bZIP proteins. Northern blot analysis showed that the NtbZIP gene is not induced by exogenous ABA and is expressed in different tobacco organs. Cotransformation assays showed that the NtbZIP protein could activate the transcription of the GUS gene driven by the PNZIP promoter. Transgenic tobaccos analysis demonstrated that constitutively expressing antisense NtbZIP gene resulted in a lower NTZIP synthesis and reduced chlorophyll levels. We suggest that NTZIP is a target gene of NtbZIP, which is involved in the regulation of chlorophyll biosynthesis. |
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To investigate the molecular mechanism governing the PNZIP gene, the PNZIP promoter was isolated and analyzed. Deletion analysis indicated that G-box is an important element in the regulation of the reporter gene expression. Further mutation assay demonstrated that G-box and GATACT elements are necessary and sufficient for the high and tissue-specific expression of the GUS gene. Using yeast one-hybrid screening, we have isolated a novel tobacco bZIP protein, NtbZIP, which can specifically recognize the G-box of the PNZIP promoter. The NtbZIP protein shares a limited amino acid homology to Arabidopsis ABI5 and AtAREB1 and very low homology to other bZIP proteins. Northern blot analysis showed that the NtbZIP gene is not induced by exogenous ABA and is expressed in different tobacco organs. Cotransformation assays showed that the NtbZIP protein could activate the transcription of the GUS gene driven by the PNZIP promoter. Transgenic tobaccos analysis demonstrated that constitutively expressing antisense NtbZIP gene resulted in a lower NTZIP synthesis and reduced chlorophyll levels. We suggest that NTZIP is a target gene of NtbZIP, which is involved in the regulation of chlorophyll biosynthesis.</description><identifier>ISSN: 0305-1048</identifier><identifier>EISSN: 1362-4962</identifier><identifier>DOI: 10.1093/nar/gkp126</identifier><identifier>PMID: 19270069</identifier><identifier>CODEN: NARHAD</identifier><language>eng</language><publisher>England: Oxford University Press</publisher><subject>Amino Acid Sequence ; Arabidopsis ; Base Sequence ; Binding Sites ; DNA, Complementary - isolation & purification ; DNA-Binding Proteins - genetics ; Gene Expression Regulation, Plant ; Genes, Reporter ; Molecular Biology ; Molecular Sequence Data ; Nicotiana - enzymology ; Nicotiana - genetics ; Nicotiana - metabolism ; Nuclear Proteins - analysis ; Oxygenases - biosynthesis ; Oxygenases - genetics ; Photosynthesis - genetics ; Plant Proteins - biosynthesis ; Plant Proteins - genetics ; Plant Proteins - metabolism ; Promoter Regions, Genetic ; Response Elements ; Sequence Analysis ; Tissue Distribution ; Trans-Activators - analysis ; Trans-Activators - metabolism</subject><ispartof>Nucleic acids research, 2009-05, Vol.37 (8), p.2630-2644</ispartof><rights>2009 The Author(s) 2009</rights><rights>2009 The Author(s)</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c526t-8c81a164c6824ccbbc546552a20de5d2a849ad037bdc4a7deaec72220e0cca2f3</citedby><cites>FETCH-LOGICAL-c526t-8c81a164c6824ccbbc546552a20de5d2a849ad037bdc4a7deaec72220e0cca2f3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2677881/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2677881/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,864,885,1604,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/19270069$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Yang, Yu-Tao</creatorcontrib><creatorcontrib>Yu, Yan-Li</creatorcontrib><creatorcontrib>Yang, Guo-Dong</creatorcontrib><creatorcontrib>Zhang, Jie-Dao</creatorcontrib><creatorcontrib>Zheng, Cheng-Chao</creatorcontrib><title>Tissue-specific expression of the PNZIP promoter is mediated by combinatorial interaction of different cis-elements and a novel transcriptional factor</title><title>Nucleic acids research</title><addtitle>Nucleic Acids Res</addtitle><description>Recent studies demonstrated that PNZIP and its homologs encode a special cyclase and play an important role in chlorophyll biosynthesis in higher plants. To investigate the molecular mechanism governing the PNZIP gene, the PNZIP promoter was isolated and analyzed. Deletion analysis indicated that G-box is an important element in the regulation of the reporter gene expression. Further mutation assay demonstrated that G-box and GATACT elements are necessary and sufficient for the high and tissue-specific expression of the GUS gene. Using yeast one-hybrid screening, we have isolated a novel tobacco bZIP protein, NtbZIP, which can specifically recognize the G-box of the PNZIP promoter. The NtbZIP protein shares a limited amino acid homology to Arabidopsis ABI5 and AtAREB1 and very low homology to other bZIP proteins. Northern blot analysis showed that the NtbZIP gene is not induced by exogenous ABA and is expressed in different tobacco organs. Cotransformation assays showed that the NtbZIP protein could activate the transcription of the GUS gene driven by the PNZIP promoter. Transgenic tobaccos analysis demonstrated that constitutively expressing antisense NtbZIP gene resulted in a lower NTZIP synthesis and reduced chlorophyll levels. We suggest that NTZIP is a target gene of NtbZIP, which is involved in the regulation of chlorophyll biosynthesis.</description><subject>Amino Acid Sequence</subject><subject>Arabidopsis</subject><subject>Base Sequence</subject><subject>Binding Sites</subject><subject>DNA, Complementary - isolation & purification</subject><subject>DNA-Binding Proteins - genetics</subject><subject>Gene Expression Regulation, Plant</subject><subject>Genes, Reporter</subject><subject>Molecular Biology</subject><subject>Molecular Sequence Data</subject><subject>Nicotiana - enzymology</subject><subject>Nicotiana - genetics</subject><subject>Nicotiana - metabolism</subject><subject>Nuclear Proteins - analysis</subject><subject>Oxygenases - biosynthesis</subject><subject>Oxygenases - genetics</subject><subject>Photosynthesis - genetics</subject><subject>Plant Proteins - biosynthesis</subject><subject>Plant Proteins - genetics</subject><subject>Plant Proteins - metabolism</subject><subject>Promoter Regions, Genetic</subject><subject>Response Elements</subject><subject>Sequence Analysis</subject><subject>Tissue Distribution</subject><subject>Trans-Activators - analysis</subject><subject>Trans-Activators - metabolism</subject><issn>0305-1048</issn><issn>1362-4962</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2009</creationdate><recordtype>article</recordtype><sourceid>TOX</sourceid><sourceid>EIF</sourceid><recordid>eNp90V1r1TAYB_Aiijub3vgBNAh6IdTlpU3Tm4EbmxsOPeCZyG7C0_TpWba2qUk7ti_i5zWHHubLhVcJ5Pf8-YcnSV4w-p7RUuz34PfXNwPj8lGyYELyNCslf5wsqKB5ymimdpLdEK4pZRnLs6fJDit5QaksF8nPlQ1hwjQMaGxjDcG7wWMI1vXENWS8QrL8fHm2JIN3nRvRExtIh7WFEWtS3RPjusr2MDpvoSW2jwTMuB2vbdOgx34kxoYUW-ziPRDoawKkd7fYktFDH4y3w2YmJjRx2vlnyZMG2oDPt-decnFyvDo6Tc-_fDw7-nCempzLMVVGMWAyM1LxzJiqMnkm85wDpzXmNQeVlVBTUVS1yaCoEdAUnHOK1BjgjdhLDubcYarir0ys56HVg7cd-HvtwOq_X3p7pdfuVnNZFEqxGPB2G-DdjwnDqDsbDLYt9OimoDmVshSKR_j6H3jtJh9_vDE0V5kqRETvZmS8C8Fj89CEUb3ZtY671vOuI375Z_ffdLvcCN7MwE3D_4PS2dkw4t2DBH-jZSGKXJ9-v9Srw2-HJ-LTUm9avpp9A07D2tugL75yygRlkisupfgF4kXP0w</recordid><startdate>20090501</startdate><enddate>20090501</enddate><creator>Yang, Yu-Tao</creator><creator>Yu, Yan-Li</creator><creator>Yang, Guo-Dong</creator><creator>Zhang, Jie-Dao</creator><creator>Zheng, Cheng-Chao</creator><general>Oxford University Press</general><general>Oxford Publishing Limited (England)</general><scope>FBQ</scope><scope>BSCLL</scope><scope>TOX</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7QO</scope><scope>7QP</scope><scope>7QR</scope><scope>7SS</scope><scope>7TK</scope><scope>7TM</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>K9.</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>5PM</scope></search><sort><creationdate>20090501</creationdate><title>Tissue-specific expression of the PNZIP promoter is mediated by combinatorial interaction of different cis-elements and a novel transcriptional factor</title><author>Yang, Yu-Tao ; Yu, Yan-Li ; Yang, Guo-Dong ; Zhang, Jie-Dao ; Zheng, Cheng-Chao</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c526t-8c81a164c6824ccbbc546552a20de5d2a849ad037bdc4a7deaec72220e0cca2f3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2009</creationdate><topic>Amino Acid Sequence</topic><topic>Arabidopsis</topic><topic>Base Sequence</topic><topic>Binding Sites</topic><topic>DNA, Complementary - isolation & purification</topic><topic>DNA-Binding Proteins - genetics</topic><topic>Gene Expression Regulation, Plant</topic><topic>Genes, Reporter</topic><topic>Molecular Biology</topic><topic>Molecular Sequence Data</topic><topic>Nicotiana - enzymology</topic><topic>Nicotiana - genetics</topic><topic>Nicotiana - metabolism</topic><topic>Nuclear Proteins - analysis</topic><topic>Oxygenases - biosynthesis</topic><topic>Oxygenases - genetics</topic><topic>Photosynthesis - genetics</topic><topic>Plant Proteins - biosynthesis</topic><topic>Plant Proteins - genetics</topic><topic>Plant Proteins - metabolism</topic><topic>Promoter Regions, Genetic</topic><topic>Response Elements</topic><topic>Sequence Analysis</topic><topic>Tissue Distribution</topic><topic>Trans-Activators - analysis</topic><topic>Trans-Activators - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Yang, Yu-Tao</creatorcontrib><creatorcontrib>Yu, Yan-Li</creatorcontrib><creatorcontrib>Yang, Guo-Dong</creatorcontrib><creatorcontrib>Zhang, Jie-Dao</creatorcontrib><creatorcontrib>Zheng, Cheng-Chao</creatorcontrib><collection>AGRIS</collection><collection>Istex</collection><collection>Oxford Journals Open Access Collection</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Biotechnology Research Abstracts</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Chemoreception Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Nucleic acids research</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Yang, Yu-Tao</au><au>Yu, Yan-Li</au><au>Yang, Guo-Dong</au><au>Zhang, Jie-Dao</au><au>Zheng, Cheng-Chao</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Tissue-specific expression of the PNZIP promoter is mediated by combinatorial interaction of different cis-elements and a novel transcriptional factor</atitle><jtitle>Nucleic acids research</jtitle><addtitle>Nucleic Acids Res</addtitle><date>2009-05-01</date><risdate>2009</risdate><volume>37</volume><issue>8</issue><spage>2630</spage><epage>2644</epage><pages>2630-2644</pages><issn>0305-1048</issn><eissn>1362-4962</eissn><coden>NARHAD</coden><abstract>Recent studies demonstrated that PNZIP and its homologs encode a special cyclase and play an important role in chlorophyll biosynthesis in higher plants. To investigate the molecular mechanism governing the PNZIP gene, the PNZIP promoter was isolated and analyzed. Deletion analysis indicated that G-box is an important element in the regulation of the reporter gene expression. Further mutation assay demonstrated that G-box and GATACT elements are necessary and sufficient for the high and tissue-specific expression of the GUS gene. Using yeast one-hybrid screening, we have isolated a novel tobacco bZIP protein, NtbZIP, which can specifically recognize the G-box of the PNZIP promoter. The NtbZIP protein shares a limited amino acid homology to Arabidopsis ABI5 and AtAREB1 and very low homology to other bZIP proteins. Northern blot analysis showed that the NtbZIP gene is not induced by exogenous ABA and is expressed in different tobacco organs. Cotransformation assays showed that the NtbZIP protein could activate the transcription of the GUS gene driven by the PNZIP promoter. Transgenic tobaccos analysis demonstrated that constitutively expressing antisense NtbZIP gene resulted in a lower NTZIP synthesis and reduced chlorophyll levels. We suggest that NTZIP is a target gene of NtbZIP, which is involved in the regulation of chlorophyll biosynthesis.</abstract><cop>England</cop><pub>Oxford University Press</pub><pmid>19270069</pmid><doi>10.1093/nar/gkp126</doi><tpages>15</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Amino Acid Sequence Arabidopsis Base Sequence Binding Sites DNA, Complementary - isolation & purification DNA-Binding Proteins - genetics Gene Expression Regulation, Plant Genes, Reporter Molecular Biology Molecular Sequence Data Nicotiana - enzymology Nicotiana - genetics Nicotiana - metabolism Nuclear Proteins - analysis Oxygenases - biosynthesis Oxygenases - genetics Photosynthesis - genetics Plant Proteins - biosynthesis Plant Proteins - genetics Plant Proteins - metabolism Promoter Regions, Genetic Response Elements Sequence Analysis Tissue Distribution Trans-Activators - analysis Trans-Activators - metabolism |
title | Tissue-specific expression of the PNZIP promoter is mediated by combinatorial interaction of different cis-elements and a novel transcriptional factor |
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