Extraproteasomal Rpn10 Restricts Access of the Polyubiquitin-Binding Protein Dsk2 to Proteasome

Polyubiquitin is a diverse signal both in terms of chain length and linkage type. Lysine 48-linked ubiquitin is essential for marking targets for proteasomal degradation, but the significance and relative abundance of different linkages remain ambiguous. Here we dissect the relationship of two prote...

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Veröffentlicht in:Molecular cell 2008-11, Vol.32 (3), p.415-425
Hauptverfasser: Matiuhin, Yulia, Kirkpatrick, Donald S., Ziv, Inbal, Kim, Woong, Dakshinamurthy, Arun, Kleifeld, Oded, Gygi, Steven P., Reis, Noa, Glickman, Michael H.
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container_end_page 425
container_issue 3
container_start_page 415
container_title Molecular cell
container_volume 32
creator Matiuhin, Yulia
Kirkpatrick, Donald S.
Ziv, Inbal
Kim, Woong
Dakshinamurthy, Arun
Kleifeld, Oded
Gygi, Steven P.
Reis, Noa
Glickman, Michael H.
description Polyubiquitin is a diverse signal both in terms of chain length and linkage type. Lysine 48-linked ubiquitin is essential for marking targets for proteasomal degradation, but the significance and relative abundance of different linkages remain ambiguous. Here we dissect the relationship of two proteasome-associated polyubiquitin-binding proteins, Rpn10 and Dsk2, and demonstrate how Rpn10 filters Dsk2 interactions, maintaining proper function of the ubiquitin-proteasome system. Using quantitative mass spectrometry of ubiquitin, we found that in S. cerevisiae under normal growth conditions the majority of conjugated ubiquitin was linked via lysine 48 and lysine 63. In contrast, upon DSK2 induction, conjugates accumulated primarily in the form of lysine 48 linkages correlating with impaired proteolysis and cytotoxicity. By restricting Dsk2 access to the proteasome, extraproteasomal Rpn10 was essential for alleviating the cellular stress associated with Dsk2. This work highlights the importance of polyubiquitin shuttles such as Rpn10 and Dsk2 in controlling the ubiquitin landscape.
doi_str_mv 10.1016/j.molcel.2008.10.011
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subjects Cell Cycle Proteins - chemistry
Cell Cycle Proteins - isolation & purification
Cell Cycle Proteins - metabolism
Humans
Kinetics
Polyubiquitin - chemistry
Polyubiquitin - metabolism
Proteasome Endopeptidase Complex - chemistry
Proteasome Endopeptidase Complex - genetics
Proteasome Endopeptidase Complex - isolation & purification
Proteasome Endopeptidase Complex - metabolism
Protein Binding
PROTEINS
RNA-Binding Proteins
Saccharomyces cerevisiae - chemistry
Saccharomyces cerevisiae - metabolism
Saccharomyces cerevisiae Proteins - chemistry
Saccharomyces cerevisiae Proteins - metabolism
Ubiquitin - isolation & purification
Ubiquitin - metabolism
Ubiquitins - chemistry
Ubiquitins - metabolism
title Extraproteasomal Rpn10 Restricts Access of the Polyubiquitin-Binding Protein Dsk2 to Proteasome
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