Correlation between clinical severity in patients with Rett syndrome with a p.R168X or p.T158M MECP2 mutation, and the direction and degree of skewing of X-chromosome inactivation

Introduction: Rett syndrome (RTT) is an X-linked dominant neurodevelopmental disorder that is usually associated with mutations in the MECP2 gene. The most common mutations in the gene are p.R168X and p.T158M. The influence of X-chromosome inactivation (XCI) on clinical severity in patients with RTT...

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Veröffentlicht in:Journal of medical genetics 2007-02, Vol.44 (2), p.148-152
Hauptverfasser: Archer, Hayley, Evans, Julie, Leonard, Helen, Colvin, Lyn, Ravine, David, Christodoulou, John, Williamson, Sarah, Charman, Tony, Bailey, Mark E S, Sampson, Julian, de Klerk, Nicholas, Clarke, Angus
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container_end_page 152
container_issue 2
container_start_page 148
container_title Journal of medical genetics
container_volume 44
creator Archer, Hayley
Evans, Julie
Leonard, Helen
Colvin, Lyn
Ravine, David
Christodoulou, John
Williamson, Sarah
Charman, Tony
Bailey, Mark E S
Sampson, Julian
de Klerk, Nicholas
Clarke, Angus
description Introduction: Rett syndrome (RTT) is an X-linked dominant neurodevelopmental disorder that is usually associated with mutations in the MECP2 gene. The most common mutations in the gene are p.R168X and p.T158M. The influence of X-chromosome inactivation (XCI) on clinical severity in patients with RTT with these mutations was investigated, taking into account the extent and direction of skewing. Methods: Female patients and their parents were recruited from the UK and Australia. Clinical severity was measured by the Pineda Severity and Kerr profile scores. The degree of XCI and its direction relative to the X chromosome parent of origin were measured in DNA prepared from peripheral blood leucocytes, and allele-specific polymerase chain reaction was used to determine the parental origin of mutation. Combining these, the percentage of cells expected to express the mutant allele was calculated. Results: Linear regression analysis was undertaken for fully informative cases with p.R168X (n = 23) and p.T158M (n = 20) mutations. A statistically significant increase in clinical severity with increase in the proportion of active mutated allele was shown for both the p.R168X and p.T158M mutations. Conclusions: XCI may vary in neurological and haematological tissues. However, these data are the first to show a relationship between the degree and direction of XCI in leucocytes and clinical severity in RTT, although the clinical utility of this in giving a prognosis for individual patients is unclear.
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The most common mutations in the gene are p.R168X and p.T158M. The influence of X-chromosome inactivation (XCI) on clinical severity in patients with RTT with these mutations was investigated, taking into account the extent and direction of skewing. Methods: Female patients and their parents were recruited from the UK and Australia. Clinical severity was measured by the Pineda Severity and Kerr profile scores. The degree of XCI and its direction relative to the X chromosome parent of origin were measured in DNA prepared from peripheral blood leucocytes, and allele-specific polymerase chain reaction was used to determine the parental origin of mutation. Combining these, the percentage of cells expected to express the mutant allele was calculated. Results: Linear regression analysis was undertaken for fully informative cases with p.R168X (n = 23) and p.T158M (n = 20) mutations. A statistically significant increase in clinical severity with increase in the proportion of active mutated allele was shown for both the p.R168X and p.T158M mutations. Conclusions: XCI may vary in neurological and haematological tissues. However, these data are the first to show a relationship between the degree and direction of XCI in leucocytes and clinical severity in RTT, although the clinical utility of this in giving a prognosis for individual patients is unclear.</description><identifier>ISSN: 0022-2593</identifier><identifier>ISSN: 1468-6244</identifier><identifier>EISSN: 1468-6244</identifier><identifier>DOI: 10.1136/jmg.2006.045260</identifier><identifier>PMID: 16905679</identifier><identifier>CODEN: JMDGAE</identifier><language>eng</language><publisher>England: BMJ Publishing Group Ltd</publisher><subject>3′ untranslated region ; 3′UTR ; Amino Acid Substitution ; Australia ; Chromosomes ; Deoxyribonucleic acid ; DNA ; DNA methylation ; Epigenetics ; Families &amp; family life ; Genes ; Genetic testing ; Genotype &amp; phenotype ; Humans ; Letter to JMG ; Methyl-CpG-Binding Protein 2 - genetics ; Mutation ; Patients ; PCR ; polymerase chain reaction ; Rett syndrome ; Rett Syndrome - genetics ; Rett Syndrome - physiopathology ; RTT ; Scotland ; Severity of Illness Index ; single-nucleotide polymorphism ; SNP ; Studies ; Wales ; X Chromosome Inactivation ; XCI</subject><ispartof>Journal of medical genetics, 2007-02, Vol.44 (2), p.148-152</ispartof><rights>Copyright 2007 Journal of Medical Genetics</rights><rights>Copyright: 2007 Copyright 2007 Journal of Medical Genetics</rights><rights>Copyright © 2007 BMJ Publishing Group Ltd</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-b523t-70f795b95be97eaef75bd801a02dc22f46a0b13f4e59ea0c671d0c416f09ca0f3</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttp://jmg.bmj.com/content/44/2/148.full.pdf$$EPDF$$P50$$Gbmj$$H</linktopdf><linktohtml>$$Uhttp://jmg.bmj.com/content/44/2/148.full$$EHTML$$P50$$Gbmj$$H</linktohtml><link.rule.ids>114,115,230,314,727,780,784,885,3196,23571,27924,27925,53791,53793,77600,77631</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/16905679$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Archer, Hayley</creatorcontrib><creatorcontrib>Evans, Julie</creatorcontrib><creatorcontrib>Leonard, Helen</creatorcontrib><creatorcontrib>Colvin, Lyn</creatorcontrib><creatorcontrib>Ravine, David</creatorcontrib><creatorcontrib>Christodoulou, John</creatorcontrib><creatorcontrib>Williamson, Sarah</creatorcontrib><creatorcontrib>Charman, Tony</creatorcontrib><creatorcontrib>Bailey, Mark E S</creatorcontrib><creatorcontrib>Sampson, Julian</creatorcontrib><creatorcontrib>de Klerk, Nicholas</creatorcontrib><creatorcontrib>Clarke, Angus</creatorcontrib><title>Correlation between clinical severity in patients with Rett syndrome with a p.R168X or p.T158M MECP2 mutation, and the direction and degree of skewing of X-chromosome inactivation</title><title>Journal of medical genetics</title><addtitle>J Med Genet</addtitle><description>Introduction: Rett syndrome (RTT) is an X-linked dominant neurodevelopmental disorder that is usually associated with mutations in the MECP2 gene. The most common mutations in the gene are p.R168X and p.T158M. The influence of X-chromosome inactivation (XCI) on clinical severity in patients with RTT with these mutations was investigated, taking into account the extent and direction of skewing. Methods: Female patients and their parents were recruited from the UK and Australia. Clinical severity was measured by the Pineda Severity and Kerr profile scores. The degree of XCI and its direction relative to the X chromosome parent of origin were measured in DNA prepared from peripheral blood leucocytes, and allele-specific polymerase chain reaction was used to determine the parental origin of mutation. Combining these, the percentage of cells expected to express the mutant allele was calculated. Results: Linear regression analysis was undertaken for fully informative cases with p.R168X (n = 23) and p.T158M (n = 20) mutations. A statistically significant increase in clinical severity with increase in the proportion of active mutated allele was shown for both the p.R168X and p.T158M mutations. Conclusions: XCI may vary in neurological and haematological tissues. 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The most common mutations in the gene are p.R168X and p.T158M. The influence of X-chromosome inactivation (XCI) on clinical severity in patients with RTT with these mutations was investigated, taking into account the extent and direction of skewing. Methods: Female patients and their parents were recruited from the UK and Australia. Clinical severity was measured by the Pineda Severity and Kerr profile scores. The degree of XCI and its direction relative to the X chromosome parent of origin were measured in DNA prepared from peripheral blood leucocytes, and allele-specific polymerase chain reaction was used to determine the parental origin of mutation. Combining these, the percentage of cells expected to express the mutant allele was calculated. Results: Linear regression analysis was undertaken for fully informative cases with p.R168X (n = 23) and p.T158M (n = 20) mutations. A statistically significant increase in clinical severity with increase in the proportion of active mutated allele was shown for both the p.R168X and p.T158M mutations. Conclusions: XCI may vary in neurological and haematological tissues. However, these data are the first to show a relationship between the degree and direction of XCI in leucocytes and clinical severity in RTT, although the clinical utility of this in giving a prognosis for individual patients is unclear.</abstract><cop>England</cop><pub>BMJ Publishing Group Ltd</pub><pmid>16905679</pmid><doi>10.1136/jmg.2006.045260</doi><tpages>5</tpages><oa>free_for_read</oa></addata></record>
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subjects 3′ untranslated region
3′UTR
Amino Acid Substitution
Australia
Chromosomes
Deoxyribonucleic acid
DNA
DNA methylation
Epigenetics
Families & family life
Genes
Genetic testing
Genotype & phenotype
Humans
Letter to JMG
Methyl-CpG-Binding Protein 2 - genetics
Mutation
Patients
PCR
polymerase chain reaction
Rett syndrome
Rett Syndrome - genetics
Rett Syndrome - physiopathology
RTT
Scotland
Severity of Illness Index
single-nucleotide polymorphism
SNP
Studies
Wales
X Chromosome Inactivation
XCI
title Correlation between clinical severity in patients with Rett syndrome with a p.R168X or p.T158M MECP2 mutation, and the direction and degree of skewing of X-chromosome inactivation
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