Accuracy of direct gradient sensing by single cells
Many types of cells are able to accurately sense shallow gradients of chemicals across their diameters, allowing the cells to move toward or away from chemical sources. This chemotactic ability relies on the remarkable capacity of cells to infer gradients from particles randomly arriving at cell-sur...
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Veröffentlicht in: | Proceedings of the National Academy of Sciences - PNAS 2008-10, Vol.105 (41), p.15749-15754 |
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description | Many types of cells are able to accurately sense shallow gradients of chemicals across their diameters, allowing the cells to move toward or away from chemical sources. This chemotactic ability relies on the remarkable capacity of cells to infer gradients from particles randomly arriving at cell-surface receptors by diffusion. Whereas the physical limits of concentration sensing by cells have been explored, there is no theory for the physical limits of gradient sensing. Here, we derive such a theory, using as models a perfectly absorbing sphere and a perfectly monitoring sphere, which, respectively, infer gradients from the absorbed surface particle density or the positions of freely diffusing particles inside a spherical volume. We find that the perfectly absorbing sphere is superior to the perfectly monitoring sphere, both for concentration and gradient sensing, because previously observed particles are never remeasured. The superiority of the absorbing sphere helps explain the presence at the surfaces of cells of signal-degrading enzymes, such as PDE for cAMP in Dictyostelium discoideum (Dicty) and BAR1 for mating factor α in Saccharomyces cerevisiae (budding yeast). Quantitatively, our theory compares favorably with recent measurements of Dicty moving up a cAMP gradient, suggesting these cells operate near the physical limits of gradient detection. |
doi_str_mv | 10.1073/pnas.0804688105 |
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This chemotactic ability relies on the remarkable capacity of cells to infer gradients from particles randomly arriving at cell-surface receptors by diffusion. Whereas the physical limits of concentration sensing by cells have been explored, there is no theory for the physical limits of gradient sensing. Here, we derive such a theory, using as models a perfectly absorbing sphere and a perfectly monitoring sphere, which, respectively, infer gradients from the absorbed surface particle density or the positions of freely diffusing particles inside a spherical volume. We find that the perfectly absorbing sphere is superior to the perfectly monitoring sphere, both for concentration and gradient sensing, because previously observed particles are never remeasured. The superiority of the absorbing sphere helps explain the presence at the surfaces of cells of signal-degrading enzymes, such as PDE for cAMP in Dictyostelium discoideum (Dicty) and BAR1 for mating factor α in Saccharomyces cerevisiae (budding yeast). Quantitatively, our theory compares favorably with recent measurements of Dicty moving up a cAMP gradient, suggesting these cells operate near the physical limits of gradient detection.</description><identifier>ISSN: 0027-8424</identifier><identifier>EISSN: 1091-6490</identifier><identifier>DOI: 10.1073/pnas.0804688105</identifier><identifier>PMID: 18843108</identifier><language>eng</language><publisher>United States: National Academy of Sciences</publisher><subject>Biological Sciences ; Biological Transport ; Biosensors ; Cell aggregates ; Cell motility ; Cells ; Cells - metabolism ; Chemotaxis ; Cyclic AMP ; Cyclic AMP - metabolism ; Dictyostelium discoideum ; Diffusion ; Enzymes ; Germ cells ; Ligands ; Lymphocytes ; Mating ; Microbiology ; Models, Biological ; Neutrophils ; Particle diffusion ; Pipettes ; Receptors ; Receptors, Cyclic AMP - metabolism ; Saccharomyces cerevisiae ; Yeast</subject><ispartof>Proceedings of the National Academy of Sciences - PNAS, 2008-10, Vol.105 (41), p.15749-15754</ispartof><rights>Copyright 2008 The National Academy of Sciences of the United States of America</rights><rights>Copyright National Academy of Sciences Oct 14, 2008</rights><rights>2008 by The National Academy of Sciences of the USA</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c620t-dace1a14d4c0733cb1a533e08c487206291887c717fc63ac952b58cfb67c85ac3</citedby><cites>FETCH-LOGICAL-c620t-dace1a14d4c0733cb1a533e08c487206291887c717fc63ac952b58cfb67c85ac3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Uhttp://www.pnas.org/content/105/41.cover.gif</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/25464487$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/25464487$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>230,314,727,780,784,803,885,27923,27924,53790,53792,58016,58249</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/18843108$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Endres, Robert G</creatorcontrib><creatorcontrib>Wingreen, Ned S</creatorcontrib><title>Accuracy of direct gradient sensing by single cells</title><title>Proceedings of the National Academy of Sciences - PNAS</title><addtitle>Proc Natl Acad Sci U S A</addtitle><description>Many types of cells are able to accurately sense shallow gradients of chemicals across their diameters, allowing the cells to move toward or away from chemical sources. This chemotactic ability relies on the remarkable capacity of cells to infer gradients from particles randomly arriving at cell-surface receptors by diffusion. Whereas the physical limits of concentration sensing by cells have been explored, there is no theory for the physical limits of gradient sensing. Here, we derive such a theory, using as models a perfectly absorbing sphere and a perfectly monitoring sphere, which, respectively, infer gradients from the absorbed surface particle density or the positions of freely diffusing particles inside a spherical volume. We find that the perfectly absorbing sphere is superior to the perfectly monitoring sphere, both for concentration and gradient sensing, because previously observed particles are never remeasured. The superiority of the absorbing sphere helps explain the presence at the surfaces of cells of signal-degrading enzymes, such as PDE for cAMP in Dictyostelium discoideum (Dicty) and BAR1 for mating factor α in Saccharomyces cerevisiae (budding yeast). Quantitatively, our theory compares favorably with recent measurements of Dicty moving up a cAMP gradient, suggesting these cells operate near the physical limits of gradient detection.</description><subject>Biological Sciences</subject><subject>Biological Transport</subject><subject>Biosensors</subject><subject>Cell aggregates</subject><subject>Cell motility</subject><subject>Cells</subject><subject>Cells - metabolism</subject><subject>Chemotaxis</subject><subject>Cyclic AMP</subject><subject>Cyclic AMP - metabolism</subject><subject>Dictyostelium discoideum</subject><subject>Diffusion</subject><subject>Enzymes</subject><subject>Germ cells</subject><subject>Ligands</subject><subject>Lymphocytes</subject><subject>Mating</subject><subject>Microbiology</subject><subject>Models, Biological</subject><subject>Neutrophils</subject><subject>Particle diffusion</subject><subject>Pipettes</subject><subject>Receptors</subject><subject>Receptors, Cyclic AMP - metabolism</subject><subject>Saccharomyces cerevisiae</subject><subject>Yeast</subject><issn>0027-8424</issn><issn>1091-6490</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2008</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkc1v1DAQxS0EokvhzAmIOCBxSDvjb1-QqoovqRIH6NlyHGfJKhsvdoLY_x6HXXWBS09zmN88vTePkOcIFwiKXe5Gly9AA5daI4gHZIVgsJbcwEOyAqCq1pzyM_Ik5w0AGKHhMTlDrTlD0CvCrryfk_P7KnZV26fgp2qdXNuHcapyGHM_rqtmXy1zCJUPw5CfkkedG3J4dpzn5PbD-2_Xn-qbLx8_X1_d1F5SmOrW-YAOect9scp8g04wFkB7rhUFSU2xobxC1XnJnDeCNkL7rpHKa-E8OyfvDrq7udmG1hdLyQ12l_qtS3sbXW__3Yz9d7uOPy0Vihqmi8Cbo0CKP-aQJ7vt8xLBjSHO2UojixEw94IUKOMMZAFf_wdu4pzG8oXCIEOJWhXo8gD5FHNOobuzjGCX2uxSmz3VVi5e_p30xB97KsDbI7BcnuSE5WhRKG5sNw_DFH5Nha3uYQvy4oBs8hTTHUMFl5z_SfDqsO9ctG6d-mxvvy4BAYVAkJL9Btbkvc4</recordid><startdate>20081014</startdate><enddate>20081014</enddate><creator>Endres, Robert G</creator><creator>Wingreen, Ned S</creator><general>National Academy of Sciences</general><general>National Acad Sciences</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QG</scope><scope>7QL</scope><scope>7QP</scope><scope>7QR</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7TK</scope><scope>7TM</scope><scope>7TO</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20081014</creationdate><title>Accuracy of direct gradient sensing by single cells</title><author>Endres, Robert G ; 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This chemotactic ability relies on the remarkable capacity of cells to infer gradients from particles randomly arriving at cell-surface receptors by diffusion. Whereas the physical limits of concentration sensing by cells have been explored, there is no theory for the physical limits of gradient sensing. Here, we derive such a theory, using as models a perfectly absorbing sphere and a perfectly monitoring sphere, which, respectively, infer gradients from the absorbed surface particle density or the positions of freely diffusing particles inside a spherical volume. We find that the perfectly absorbing sphere is superior to the perfectly monitoring sphere, both for concentration and gradient sensing, because previously observed particles are never remeasured. 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subjects | Biological Sciences Biological Transport Biosensors Cell aggregates Cell motility Cells Cells - metabolism Chemotaxis Cyclic AMP Cyclic AMP - metabolism Dictyostelium discoideum Diffusion Enzymes Germ cells Ligands Lymphocytes Mating Microbiology Models, Biological Neutrophils Particle diffusion Pipettes Receptors Receptors, Cyclic AMP - metabolism Saccharomyces cerevisiae Yeast |
title | Accuracy of direct gradient sensing by single cells |
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