From Hypo- to Hypersuppression: Effect of Amino Acid Substitutions on the RNA-Silencing Suppressor Activity of the Tobacco etch potyvirus HC-Pro
RNA silencing participates in several important functions: from the regulation of cell metabolism and organism development to sequence-specific antiviral defense. Most plant viruses have evolved proteins that suppress RNA silencing and that in many cases are multifunctional. Tobacco etch potyvirus (...
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description | RNA silencing participates in several important functions: from the regulation of cell metabolism and organism development to sequence-specific antiviral defense. Most plant viruses have evolved proteins that suppress RNA silencing and that in many cases are multifunctional. Tobacco etch potyvirus (TEV) HC-Pro protein suppresses RNA silencing and participates in aphid-mediated transmission, polyprotein processing, and genome amplification. In this study, we have generated 28 HC-Pro amino acid substitution mutants and quantified their capacity as suppressors of RNA silencing in a transient expression assay. Most mutations either had no quantitative effect or completely abolished silencing suppression (10 in each class), 3 caused a significant decrease in the activity, and 5 significantly increased it, revealing an unexpected high frequency of mutations conferring hypersuppressor activity. A representative set of the mutant alleles, containing both hypo- and hypersuppressors, was further analyzed for their effect on TEV accumulation and the strength of induced symptoms. Whereas TEV variants with hyposuppressor mutants were far less virulent than wild-type TEV, those with hypersuppressor alleles induced symptoms that were not more severe than those characteristic of the wild-type virus, suggesting that there is not a perfect match between suppression and virulence. |
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Most plant viruses have evolved proteins that suppress RNA silencing and that in many cases are multifunctional. Tobacco etch potyvirus (TEV) HC-Pro protein suppresses RNA silencing and participates in aphid-mediated transmission, polyprotein processing, and genome amplification. In this study, we have generated 28 HC-Pro amino acid substitution mutants and quantified their capacity as suppressors of RNA silencing in a transient expression assay. Most mutations either had no quantitative effect or completely abolished silencing suppression (10 in each class), 3 caused a significant decrease in the activity, and 5 significantly increased it, revealing an unexpected high frequency of mutations conferring hypersuppressor activity. A representative set of the mutant alleles, containing both hypo- and hypersuppressors, was further analyzed for their effect on TEV accumulation and the strength of induced symptoms. Whereas TEV variants with hyposuppressor mutants were far less virulent than wild-type TEV, those with hypersuppressor alleles induced symptoms that were not more severe than those characteristic of the wild-type virus, suggesting that there is not a perfect match between suppression and virulence.</description><identifier>ISSN: 0016-6731</identifier><identifier>ISSN: 1943-2631</identifier><identifier>EISSN: 1943-2631</identifier><identifier>DOI: 10.1534/genetics.108.091363</identifier><identifier>PMID: 18780745</identifier><identifier>CODEN: GENTAE</identifier><language>eng</language><publisher>United States: Genetics Soc America</publisher><subject>amino acid substitution ; Amino Acid Substitution - genetics ; Amino acids ; Cysteine Endopeptidases - genetics ; Defense mechanisms ; gene silencing ; Genome, Viral ; HC-Pro protein ; host-pathogen relationships ; infection ; Investigations ; Life Sciences ; Molecular biology ; mutants ; Mutation ; Nicotiana benthamiana ; Plant Viruses - genetics ; Potyvirus - genetics ; Potyvirus - pathogenicity ; Potyvirus - physiology ; Proteins ; RNA ; RNA Interference ; RNA silencing ; Tobacco etch virus ; viral proteins ; Viral Proteins - genetics ; virulence</subject><ispartof>Genetics (Austin), 2008-10, Vol.180 (2), p.1039-1049</ispartof><rights>Copyright Genetics Society of America Oct 2008</rights><rights>Distributed under a Creative Commons Attribution 4.0 International License</rights><rights>Copyright © 2008 by the Genetics Society of America</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c520t-84c128930040f45ea01c2ded1ac9eda19383b04b136ac8753c1ad78c22f91f903</citedby><cites>FETCH-LOGICAL-c520t-84c128930040f45ea01c2ded1ac9eda19383b04b136ac8753c1ad78c22f91f903</cites><orcidid>0000-0003-2116-1471</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,776,780,881,27901,27902</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/18780745$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://hal.inrae.fr/hal-02667910$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Torres-Barceló, Clara</creatorcontrib><creatorcontrib>Martin, Susana</creatorcontrib><creatorcontrib>Daros, Jose-Antonio</creatorcontrib><creatorcontrib>Elena, Santiago F</creatorcontrib><title>From Hypo- to Hypersuppression: Effect of Amino Acid Substitutions on the RNA-Silencing Suppressor Activity of the Tobacco etch potyvirus HC-Pro</title><title>Genetics (Austin)</title><addtitle>Genetics</addtitle><description>RNA silencing participates in several important functions: from the regulation of cell metabolism and organism development to sequence-specific antiviral defense. Most plant viruses have evolved proteins that suppress RNA silencing and that in many cases are multifunctional. Tobacco etch potyvirus (TEV) HC-Pro protein suppresses RNA silencing and participates in aphid-mediated transmission, polyprotein processing, and genome amplification. In this study, we have generated 28 HC-Pro amino acid substitution mutants and quantified their capacity as suppressors of RNA silencing in a transient expression assay. Most mutations either had no quantitative effect or completely abolished silencing suppression (10 in each class), 3 caused a significant decrease in the activity, and 5 significantly increased it, revealing an unexpected high frequency of mutations conferring hypersuppressor activity. A representative set of the mutant alleles, containing both hypo- and hypersuppressors, was further analyzed for their effect on TEV accumulation and the strength of induced symptoms. Whereas TEV variants with hyposuppressor mutants were far less virulent than wild-type TEV, those with hypersuppressor alleles induced symptoms that were not more severe than those characteristic of the wild-type virus, suggesting that there is not a perfect match between suppression and virulence.</description><subject>amino acid substitution</subject><subject>Amino Acid Substitution - genetics</subject><subject>Amino acids</subject><subject>Cysteine Endopeptidases - genetics</subject><subject>Defense mechanisms</subject><subject>gene silencing</subject><subject>Genome, Viral</subject><subject>HC-Pro protein</subject><subject>host-pathogen relationships</subject><subject>infection</subject><subject>Investigations</subject><subject>Life Sciences</subject><subject>Molecular biology</subject><subject>mutants</subject><subject>Mutation</subject><subject>Nicotiana benthamiana</subject><subject>Plant Viruses - genetics</subject><subject>Potyvirus - genetics</subject><subject>Potyvirus - pathogenicity</subject><subject>Potyvirus - physiology</subject><subject>Proteins</subject><subject>RNA</subject><subject>RNA Interference</subject><subject>RNA silencing</subject><subject>Tobacco etch virus</subject><subject>viral proteins</subject><subject>Viral Proteins - 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Hypo- to Hypersuppression: Effect of Amino Acid Substitutions on the RNA-Silencing Suppressor Activity of the Tobacco etch potyvirus HC-Pro</title><author>Torres-Barceló, Clara ; Martin, Susana ; Daros, Jose-Antonio ; Elena, Santiago F</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c520t-84c128930040f45ea01c2ded1ac9eda19383b04b136ac8753c1ad78c22f91f903</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2008</creationdate><topic>amino acid substitution</topic><topic>Amino Acid Substitution - genetics</topic><topic>Amino acids</topic><topic>Cysteine Endopeptidases - genetics</topic><topic>Defense mechanisms</topic><topic>gene silencing</topic><topic>Genome, Viral</topic><topic>HC-Pro protein</topic><topic>host-pathogen relationships</topic><topic>infection</topic><topic>Investigations</topic><topic>Life Sciences</topic><topic>Molecular 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(Austin)</jtitle><addtitle>Genetics</addtitle><date>2008-10-01</date><risdate>2008</risdate><volume>180</volume><issue>2</issue><spage>1039</spage><epage>1049</epage><pages>1039-1049</pages><issn>0016-6731</issn><issn>1943-2631</issn><eissn>1943-2631</eissn><coden>GENTAE</coden><abstract>RNA silencing participates in several important functions: from the regulation of cell metabolism and organism development to sequence-specific antiviral defense. Most plant viruses have evolved proteins that suppress RNA silencing and that in many cases are multifunctional. Tobacco etch potyvirus (TEV) HC-Pro protein suppresses RNA silencing and participates in aphid-mediated transmission, polyprotein processing, and genome amplification. In this study, we have generated 28 HC-Pro amino acid substitution mutants and quantified their capacity as suppressors of RNA silencing in a transient expression assay. Most mutations either had no quantitative effect or completely abolished silencing suppression (10 in each class), 3 caused a significant decrease in the activity, and 5 significantly increased it, revealing an unexpected high frequency of mutations conferring hypersuppressor activity. A representative set of the mutant alleles, containing both hypo- and hypersuppressors, was further analyzed for their effect on TEV accumulation and the strength of induced symptoms. Whereas TEV variants with hyposuppressor mutants were far less virulent than wild-type TEV, those with hypersuppressor alleles induced symptoms that were not more severe than those characteristic of the wild-type virus, suggesting that there is not a perfect match between suppression and virulence.</abstract><cop>United States</cop><pub>Genetics Soc America</pub><pmid>18780745</pmid><doi>10.1534/genetics.108.091363</doi><tpages>11</tpages><orcidid>https://orcid.org/0000-0003-2116-1471</orcidid><oa>free_for_read</oa></addata></record> |
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source | Oxford University Press Journals All Titles (1996-Current); MEDLINE; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; Alma/SFX Local Collection |
subjects | amino acid substitution Amino Acid Substitution - genetics Amino acids Cysteine Endopeptidases - genetics Defense mechanisms gene silencing Genome, Viral HC-Pro protein host-pathogen relationships infection Investigations Life Sciences Molecular biology mutants Mutation Nicotiana benthamiana Plant Viruses - genetics Potyvirus - genetics Potyvirus - pathogenicity Potyvirus - physiology Proteins RNA RNA Interference RNA silencing Tobacco etch virus viral proteins Viral Proteins - genetics virulence |
title | From Hypo- to Hypersuppression: Effect of Amino Acid Substitutions on the RNA-Silencing Suppressor Activity of the Tobacco etch potyvirus HC-Pro |
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