Use of Gene Dosage Effects for a Whole-Genome Screen To Identify Mycobacterium marinum Macrophage Infection Loci
We recently identified two loci, mel1 and mel2, that affect macrophage infection by Mycobacterium marinum. The ability of these loci to confer enhanced infection in trans is presumably due to gene dosage effects since their presence on plasmids increases expression from five- to eightfold. Reasoning...
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description | We recently identified two loci, mel1 and mel2, that affect macrophage infection by Mycobacterium marinum. The ability of these loci to confer enhanced infection in trans is presumably due to gene dosage effects since their presence on plasmids increases expression from five- to eightfold. Reasoning that this phenomenon would allow identification of other mycobacterial genes involved in macrophage infection, we conducted a screen of an M. marinum DNA library that provides 2.6-fold coverage of the entire genome for clones that affect macrophage infection. Our preliminary screen identified 76 plasmids that carry loci affecting macrophage infection. We eliminated plasmids that do not confer the expected phenotype when retransformed (70%), that have identical physical maps (5%), or that carry either of the mel1 or mel2 loci (14%) from further consideration. Four loci that confer enhanced infection (mel) and four that confer repressed infection (mrl) of macrophages were identified, and two of each group were chosen for detailed analysis. Saturating transposon mutagenesis was used to identify the loci responsible, and M. marinum mutants were constructed in the genes involved. We expect these genes to provide insight into how mycobacteria parasitize macrophages, an important component of innate immunity. |
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The ability of these loci to confer enhanced infection in trans is presumably due to gene dosage effects since their presence on plasmids increases expression from five- to eightfold. Reasoning that this phenomenon would allow identification of other mycobacterial genes involved in macrophage infection, we conducted a screen of an M. marinum DNA library that provides 2.6-fold coverage of the entire genome for clones that affect macrophage infection. Our preliminary screen identified 76 plasmids that carry loci affecting macrophage infection. We eliminated plasmids that do not confer the expected phenotype when retransformed (70%), that have identical physical maps (5%), or that carry either of the mel1 or mel2 loci (14%) from further consideration. Four loci that confer enhanced infection (mel) and four that confer repressed infection (mrl) of macrophages were identified, and two of each group were chosen for detailed analysis. Saturating transposon mutagenesis was used to identify the loci responsible, and M. marinum mutants were constructed in the genes involved. We expect these genes to provide insight into how mycobacteria parasitize macrophages, an important component of innate immunity.</description><identifier>ISSN: 0019-9567</identifier><identifier>EISSN: 1098-5522</identifier><identifier>DOI: 10.1128/IAI.00015-08</identifier><identifier>PMID: 18443095</identifier><identifier>CODEN: INFIBR</identifier><language>eng</language><publisher>Washington, DC: American Society for Microbiology</publisher><subject>Animals ; Bacterial Proteins - genetics ; Biological and medical sciences ; Cell Line ; Cellular Microbiology: Pathogen-Host Cell Molecular Interactions ; Chromosome Mapping ; Cosmids ; DNA Transposable Elements ; Fundamental and applied biological sciences. Psychology ; Gene Dosage ; Gene Expression Regulation, Bacterial ; Genomic Library ; Humans ; Macrophages - microbiology ; Mice ; Microbiology ; Mutagenesis, Insertional ; Mycobacterium ; Mycobacterium Infections, Nontuberculous - microbiology ; Mycobacterium marinum ; Mycobacterium marinum - genetics ; Mycobacterium marinum - pathogenicity ; Virulence</subject><ispartof>Infection and Immunity, 2008-07, Vol.76 (7), p.3100-3115</ispartof><rights>2008 INIST-CNRS</rights><rights>Copyright © 2008, American Society for Microbiology</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c493t-2bd8793c2dccb26451013547decd87b4a617a169722ffd9096c3b1bab0e0fe373</citedby><cites>FETCH-LOGICAL-c493t-2bd8793c2dccb26451013547decd87b4a617a169722ffd9096c3b1bab0e0fe373</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2446711/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2446711/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,725,778,782,883,3177,3178,27911,27912,53778,53780</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=20460169$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/18443095$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Park, Bonggoo</creatorcontrib><creatorcontrib>Subbian, Selvakumar</creatorcontrib><creatorcontrib>El-Etr, Sahar H</creatorcontrib><creatorcontrib>Cirillo, Suat L.G</creatorcontrib><creatorcontrib>Cirillo, Jeffrey D</creatorcontrib><title>Use of Gene Dosage Effects for a Whole-Genome Screen To Identify Mycobacterium marinum Macrophage Infection Loci</title><title>Infection and Immunity</title><addtitle>Infect Immun</addtitle><description>We recently identified two loci, mel1 and mel2, that affect macrophage infection by Mycobacterium marinum. The ability of these loci to confer enhanced infection in trans is presumably due to gene dosage effects since their presence on plasmids increases expression from five- to eightfold. Reasoning that this phenomenon would allow identification of other mycobacterial genes involved in macrophage infection, we conducted a screen of an M. marinum DNA library that provides 2.6-fold coverage of the entire genome for clones that affect macrophage infection. Our preliminary screen identified 76 plasmids that carry loci affecting macrophage infection. We eliminated plasmids that do not confer the expected phenotype when retransformed (70%), that have identical physical maps (5%), or that carry either of the mel1 or mel2 loci (14%) from further consideration. Four loci that confer enhanced infection (mel) and four that confer repressed infection (mrl) of macrophages were identified, and two of each group were chosen for detailed analysis. Saturating transposon mutagenesis was used to identify the loci responsible, and M. marinum mutants were constructed in the genes involved. We expect these genes to provide insight into how mycobacteria parasitize macrophages, an important component of innate immunity.</description><subject>Animals</subject><subject>Bacterial Proteins - genetics</subject><subject>Biological and medical sciences</subject><subject>Cell Line</subject><subject>Cellular Microbiology: Pathogen-Host Cell Molecular Interactions</subject><subject>Chromosome Mapping</subject><subject>Cosmids</subject><subject>DNA Transposable Elements</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Gene Dosage</subject><subject>Gene Expression Regulation, Bacterial</subject><subject>Genomic Library</subject><subject>Humans</subject><subject>Macrophages - microbiology</subject><subject>Mice</subject><subject>Microbiology</subject><subject>Mutagenesis, Insertional</subject><subject>Mycobacterium</subject><subject>Mycobacterium Infections, Nontuberculous - microbiology</subject><subject>Mycobacterium marinum</subject><subject>Mycobacterium marinum - genetics</subject><subject>Mycobacterium marinum - pathogenicity</subject><subject>Virulence</subject><issn>0019-9567</issn><issn>1098-5522</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2008</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpVkUFv1DAQhS0EokvhxhnMAU6kjB0nji9IVSkl0lYc2hVHy3HGu0ZJvNhZ0P57vOyqwGlkz6c3b-YR8pLBBWO8-dBethcAwKoCmkdkwUA1RVVx_pgs8q8qVFXLM_Ispe_5KYRonpIz1ghRgqoWZLtKSIOjNzgh_RSSWSO9dg7tnKgLkRr6bRMGLHI_jEjvbESc6H2gbY_T7N2e3u5t6IydMfrdSEcT_ZTrrbExbDcHuXY6yPkw0WWw_jl54syQ8MWpnpPV5-v7qy_F8utNe3W5LKxQ5Vzwrm-kKi3vre14LSoGrKyE7NHmRidMzaRhtZKcO9crULUtO9aZDhAclrI8Jx-PuttdN2Jvs9toBr2NPlvc62C8_r8z-Y1eh5-aC1FLxrLAu5NADD92mGY9-mRxGMyEYZc0zzOhUpDB90cwb5xSRPcwhIE-RKRzRPpPRBqajL_619hf-JRJBt6eAJOsGVw0k_XpgeMgasibZ-7Nkdv49eaXj6hNGrXPi8laS10yOHh7fWScCdqsY9ZZ3fF8SgAFUjas_A2Ixq5L</recordid><startdate>20080701</startdate><enddate>20080701</enddate><creator>Park, Bonggoo</creator><creator>Subbian, Selvakumar</creator><creator>El-Etr, Sahar H</creator><creator>Cirillo, Suat L.G</creator><creator>Cirillo, Jeffrey D</creator><general>American Society for Microbiology</general><general>American Society for Microbiology (ASM)</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7T5</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>P64</scope><scope>RC3</scope><scope>5PM</scope></search><sort><creationdate>20080701</creationdate><title>Use of Gene Dosage Effects for a Whole-Genome Screen To Identify Mycobacterium marinum Macrophage Infection Loci</title><author>Park, Bonggoo ; Subbian, Selvakumar ; El-Etr, Sahar H ; Cirillo, Suat L.G ; Cirillo, Jeffrey D</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c493t-2bd8793c2dccb26451013547decd87b4a617a169722ffd9096c3b1bab0e0fe373</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2008</creationdate><topic>Animals</topic><topic>Bacterial Proteins - genetics</topic><topic>Biological and medical sciences</topic><topic>Cell Line</topic><topic>Cellular Microbiology: Pathogen-Host Cell Molecular Interactions</topic><topic>Chromosome Mapping</topic><topic>Cosmids</topic><topic>DNA Transposable Elements</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Gene Dosage</topic><topic>Gene Expression Regulation, Bacterial</topic><topic>Genomic Library</topic><topic>Humans</topic><topic>Macrophages - microbiology</topic><topic>Mice</topic><topic>Microbiology</topic><topic>Mutagenesis, Insertional</topic><topic>Mycobacterium</topic><topic>Mycobacterium Infections, Nontuberculous - microbiology</topic><topic>Mycobacterium marinum</topic><topic>Mycobacterium marinum - genetics</topic><topic>Mycobacterium marinum - pathogenicity</topic><topic>Virulence</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Park, Bonggoo</creatorcontrib><creatorcontrib>Subbian, Selvakumar</creatorcontrib><creatorcontrib>El-Etr, Sahar H</creatorcontrib><creatorcontrib>Cirillo, Suat L.G</creatorcontrib><creatorcontrib>Cirillo, Jeffrey D</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Immunology Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Infection and Immunity</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Park, Bonggoo</au><au>Subbian, Selvakumar</au><au>El-Etr, Sahar H</au><au>Cirillo, Suat L.G</au><au>Cirillo, Jeffrey D</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Use of Gene Dosage Effects for a Whole-Genome Screen To Identify Mycobacterium marinum Macrophage Infection Loci</atitle><jtitle>Infection and Immunity</jtitle><addtitle>Infect Immun</addtitle><date>2008-07-01</date><risdate>2008</risdate><volume>76</volume><issue>7</issue><spage>3100</spage><epage>3115</epage><pages>3100-3115</pages><issn>0019-9567</issn><eissn>1098-5522</eissn><coden>INFIBR</coden><abstract>We recently identified two loci, mel1 and mel2, that affect macrophage infection by Mycobacterium marinum. The ability of these loci to confer enhanced infection in trans is presumably due to gene dosage effects since their presence on plasmids increases expression from five- to eightfold. Reasoning that this phenomenon would allow identification of other mycobacterial genes involved in macrophage infection, we conducted a screen of an M. marinum DNA library that provides 2.6-fold coverage of the entire genome for clones that affect macrophage infection. Our preliminary screen identified 76 plasmids that carry loci affecting macrophage infection. We eliminated plasmids that do not confer the expected phenotype when retransformed (70%), that have identical physical maps (5%), or that carry either of the mel1 or mel2 loci (14%) from further consideration. Four loci that confer enhanced infection (mel) and four that confer repressed infection (mrl) of macrophages were identified, and two of each group were chosen for detailed analysis. Saturating transposon mutagenesis was used to identify the loci responsible, and M. marinum mutants were constructed in the genes involved. We expect these genes to provide insight into how mycobacteria parasitize macrophages, an important component of innate immunity.</abstract><cop>Washington, DC</cop><pub>American Society for Microbiology</pub><pmid>18443095</pmid><doi>10.1128/IAI.00015-08</doi><tpages>16</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Animals Bacterial Proteins - genetics Biological and medical sciences Cell Line Cellular Microbiology: Pathogen-Host Cell Molecular Interactions Chromosome Mapping Cosmids DNA Transposable Elements Fundamental and applied biological sciences. Psychology Gene Dosage Gene Expression Regulation, Bacterial Genomic Library Humans Macrophages - microbiology Mice Microbiology Mutagenesis, Insertional Mycobacterium Mycobacterium Infections, Nontuberculous - microbiology Mycobacterium marinum Mycobacterium marinum - genetics Mycobacterium marinum - pathogenicity Virulence |
title | Use of Gene Dosage Effects for a Whole-Genome Screen To Identify Mycobacterium marinum Macrophage Infection Loci |
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