Social regulation of gene expression in human leukocytes
Social environmental influences on human health are well established in the epidemiology literature, but their functional genomic mechanisms are unclear. The present study analyzed genome-wide transcriptional activity in people who chronically experienced high versus low levels of subjective social...
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Veröffentlicht in: | Genome Biology (Online Edition) 2007-09, Vol.8 (9), p.R189-R189, Article R189 |
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description | Social environmental influences on human health are well established in the epidemiology literature, but their functional genomic mechanisms are unclear. The present study analyzed genome-wide transcriptional activity in people who chronically experienced high versus low levels of subjective social isolation (loneliness) to assess alterations in the activity of transcription control pathways that might contribute to increased adverse health outcomes in social isolates.
DNA microarray analysis identified 209 genes that were differentially expressed in circulating leukocytes from 14 high- versus low-lonely individuals, including up-regulation of genes involved in immune activation, transcription control, and cell proliferation, and down-regulation of genes supporting mature B lymphocyte function and type I interferon response. Promoter-based bioinformatic analyses showed under-expression of genes bearing anti-inflammatory glucocorticoid response elements (GREs; p = 0.032) and over-expression of genes bearing response elements for pro-inflammatory NF-kappaB/Rel transcription factors (p = 0.011). This reciprocal shift in pro- and anti-inflammatory signaling was not attributable to differences in circulating cortisol levels, or to other demographic, psychological, or medical characteristics. Additional transcription control pathways showing differential activity in bioinformatic analyses included the CREB/ATF, JAK/STAT, IRF1, C/EBP, Oct, and GATA pathways.
These data provide the first indication that human genome-wide transcriptional activity is altered in association with a social epidemiological risk factor. Impaired transcription of glucocorticoid response genes and increased activity of pro-inflammatory transcription control pathways provide a functional genomic explanation for elevated risk of inflammatory disease in individuals who experience chronically high levels of subjective social isolation. |
doi_str_mv | 10.1186/gb-2007-8-9-r189 |
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DNA microarray analysis identified 209 genes that were differentially expressed in circulating leukocytes from 14 high- versus low-lonely individuals, including up-regulation of genes involved in immune activation, transcription control, and cell proliferation, and down-regulation of genes supporting mature B lymphocyte function and type I interferon response. Promoter-based bioinformatic analyses showed under-expression of genes bearing anti-inflammatory glucocorticoid response elements (GREs; p = 0.032) and over-expression of genes bearing response elements for pro-inflammatory NF-kappaB/Rel transcription factors (p = 0.011). This reciprocal shift in pro- and anti-inflammatory signaling was not attributable to differences in circulating cortisol levels, or to other demographic, psychological, or medical characteristics. Additional transcription control pathways showing differential activity in bioinformatic analyses included the CREB/ATF, JAK/STAT, IRF1, C/EBP, Oct, and GATA pathways.
These data provide the first indication that human genome-wide transcriptional activity is altered in association with a social epidemiological risk factor. Impaired transcription of glucocorticoid response genes and increased activity of pro-inflammatory transcription control pathways provide a functional genomic explanation for elevated risk of inflammatory disease in individuals who experience chronically high levels of subjective social isolation.</description><identifier>ISSN: 1474-760X</identifier><identifier>ISSN: 1465-6906</identifier><identifier>EISSN: 1474-760X</identifier><identifier>EISSN: 1465-6914</identifier><identifier>DOI: 10.1186/gb-2007-8-9-r189</identifier><identifier>PMID: 17854483</identifier><language>eng</language><publisher>England: BioMed Central Ltd</publisher><subject>Aged ; B-lymphocytes ; bioinformatics ; C-Reactive Protein - metabolism ; cell proliferation ; Computational Biology - methods ; cortisol ; DNA microarrays ; epidemiology ; Female ; Gene expression ; Gene Expression Regulation ; gene overexpression ; genes ; Genome, Human ; Glucocorticoids - metabolism ; Health aspects ; human health ; Humans ; interferons ; Interpersonal Relations ; Leukocytes ; Leukocytes - metabolism ; Male ; Middle Aged ; Models, Biological ; Promoter Regions, Genetic ; response elements ; risk factors ; Signal Transduction ; Social isolation ; transcription (genetics) ; transcription factors</subject><ispartof>Genome Biology (Online Edition), 2007-09, Vol.8 (9), p.R189-R189, Article R189</ispartof><rights>COPYRIGHT 2007 BioMed Central Ltd.</rights><rights>Copyright © 2007 Cole et al.; licensee BioMed Central Ltd. 2007 Cole et al.; licensee BioMed Central Ltd.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c659t-ff10cfcdd385b5731829e20ea6e0affa21aff0a79587ca6f3694ab038223d9a63</citedby><cites>FETCH-LOGICAL-c659t-ff10cfcdd385b5731829e20ea6e0affa21aff0a79587ca6f3694ab038223d9a63</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2375027/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2375027/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,724,777,781,861,882,27905,27906,53772,53774</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/17854483$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Cole, Steve W</creatorcontrib><creatorcontrib>Hawkley, Louise C</creatorcontrib><creatorcontrib>Arevalo, Jesusa M</creatorcontrib><creatorcontrib>Sung, Caroline Y</creatorcontrib><creatorcontrib>Rose, Robert M</creatorcontrib><creatorcontrib>Cacioppo, John T</creatorcontrib><title>Social regulation of gene expression in human leukocytes</title><title>Genome Biology (Online Edition)</title><addtitle>Genome Biol</addtitle><description>Social environmental influences on human health are well established in the epidemiology literature, but their functional genomic mechanisms are unclear. The present study analyzed genome-wide transcriptional activity in people who chronically experienced high versus low levels of subjective social isolation (loneliness) to assess alterations in the activity of transcription control pathways that might contribute to increased adverse health outcomes in social isolates.
DNA microarray analysis identified 209 genes that were differentially expressed in circulating leukocytes from 14 high- versus low-lonely individuals, including up-regulation of genes involved in immune activation, transcription control, and cell proliferation, and down-regulation of genes supporting mature B lymphocyte function and type I interferon response. Promoter-based bioinformatic analyses showed under-expression of genes bearing anti-inflammatory glucocorticoid response elements (GREs; p = 0.032) and over-expression of genes bearing response elements for pro-inflammatory NF-kappaB/Rel transcription factors (p = 0.011). This reciprocal shift in pro- and anti-inflammatory signaling was not attributable to differences in circulating cortisol levels, or to other demographic, psychological, or medical characteristics. Additional transcription control pathways showing differential activity in bioinformatic analyses included the CREB/ATF, JAK/STAT, IRF1, C/EBP, Oct, and GATA pathways.
These data provide the first indication that human genome-wide transcriptional activity is altered in association with a social epidemiological risk factor. Impaired transcription of glucocorticoid response genes and increased activity of pro-inflammatory transcription control pathways provide a functional genomic explanation for elevated risk of inflammatory disease in individuals who experience chronically high levels of subjective social isolation.</description><subject>Aged</subject><subject>B-lymphocytes</subject><subject>bioinformatics</subject><subject>C-Reactive Protein - metabolism</subject><subject>cell proliferation</subject><subject>Computational Biology - methods</subject><subject>cortisol</subject><subject>DNA microarrays</subject><subject>epidemiology</subject><subject>Female</subject><subject>Gene expression</subject><subject>Gene Expression Regulation</subject><subject>gene overexpression</subject><subject>genes</subject><subject>Genome, Human</subject><subject>Glucocorticoids - metabolism</subject><subject>Health aspects</subject><subject>human health</subject><subject>Humans</subject><subject>interferons</subject><subject>Interpersonal Relations</subject><subject>Leukocytes</subject><subject>Leukocytes - metabolism</subject><subject>Male</subject><subject>Middle Aged</subject><subject>Models, Biological</subject><subject>Promoter Regions, Genetic</subject><subject>response elements</subject><subject>risk factors</subject><subject>Signal Transduction</subject><subject>Social isolation</subject><subject>transcription (genetics)</subject><subject>transcription factors</subject><issn>1474-760X</issn><issn>1465-6906</issn><issn>1474-760X</issn><issn>1465-6914</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2007</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>KPI</sourceid><recordid>eNp9UU1rFTEUDaLY2rp3JbMSu5iaj5l8bIRSrBYLClZwFzKZm2l0JnlNZqT9983wHtq3KYGbcO855-beg9Abgk8JkfzD0NUUY1HLWtWJSPUMHZJGNLXg-NfzR-8D9Crn3xgT1VD-Eh0QIdumkewQyR_RejNWCYZlNLOPoYquGiBABXebBDmvKR-qm2UyoRph-RPt_Qz5GL1wZszwencfoZ8Xn67Pv9RX3z5fnp9d1Za3aq6dI9g62_dMtl0rGJFUAcVgOGDjnKGkRGyEaqWwhjvGVWM6zCSlrFeGsyP0cau7WboJegthTmbUm-Qnk-51NF7vV4K_0UP8qykTLaaiCLzfCaR4u0Ce9eSzhXE0AeKSdVkgJg0mYu317kkoUVzQhqyap1vgYEbQPrhYWttyepi8jQGcL_kzwlVb5lCkEE72CAUzw908mCVn_fX75T4Wb7E2xZwTuH_DEqxX2_XQrb8WWmqlV9sL5e3jJf0n7HxmD5IaqTE</recordid><startdate>20070913</startdate><enddate>20070913</enddate><creator>Cole, Steve W</creator><creator>Hawkley, Louise C</creator><creator>Arevalo, Jesusa M</creator><creator>Sung, Caroline Y</creator><creator>Rose, Robert M</creator><creator>Cacioppo, John T</creator><general>BioMed Central Ltd</general><general>BioMed Central</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>KPI</scope><scope>IAO</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope><scope>7S9</scope><scope>L.6</scope><scope>5PM</scope></search><sort><creationdate>20070913</creationdate><title>Social regulation of gene expression in human leukocytes</title><author>Cole, Steve W ; Hawkley, Louise C ; Arevalo, Jesusa M ; Sung, Caroline Y ; Rose, Robert M ; Cacioppo, John T</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c659t-ff10cfcdd385b5731829e20ea6e0affa21aff0a79587ca6f3694ab038223d9a63</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2007</creationdate><topic>Aged</topic><topic>B-lymphocytes</topic><topic>bioinformatics</topic><topic>C-Reactive Protein - metabolism</topic><topic>cell proliferation</topic><topic>Computational Biology - methods</topic><topic>cortisol</topic><topic>DNA microarrays</topic><topic>epidemiology</topic><topic>Female</topic><topic>Gene expression</topic><topic>Gene Expression Regulation</topic><topic>gene overexpression</topic><topic>genes</topic><topic>Genome, Human</topic><topic>Glucocorticoids - metabolism</topic><topic>Health aspects</topic><topic>human health</topic><topic>Humans</topic><topic>interferons</topic><topic>Interpersonal Relations</topic><topic>Leukocytes</topic><topic>Leukocytes - metabolism</topic><topic>Male</topic><topic>Middle Aged</topic><topic>Models, Biological</topic><topic>Promoter Regions, Genetic</topic><topic>response elements</topic><topic>risk factors</topic><topic>Signal Transduction</topic><topic>Social isolation</topic><topic>transcription (genetics)</topic><topic>transcription factors</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Cole, Steve W</creatorcontrib><creatorcontrib>Hawkley, Louise C</creatorcontrib><creatorcontrib>Arevalo, Jesusa M</creatorcontrib><creatorcontrib>Sung, Caroline Y</creatorcontrib><creatorcontrib>Rose, Robert M</creatorcontrib><creatorcontrib>Cacioppo, John T</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Gale In Context: Global Issues</collection><collection>Gale Academic OneFile</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>AGRICOLA</collection><collection>AGRICOLA - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Genome Biology (Online Edition)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Cole, Steve W</au><au>Hawkley, Louise C</au><au>Arevalo, Jesusa M</au><au>Sung, Caroline Y</au><au>Rose, Robert M</au><au>Cacioppo, John T</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Social regulation of gene expression in human leukocytes</atitle><jtitle>Genome Biology (Online Edition)</jtitle><addtitle>Genome Biol</addtitle><date>2007-09-13</date><risdate>2007</risdate><volume>8</volume><issue>9</issue><spage>R189</spage><epage>R189</epage><pages>R189-R189</pages><artnum>R189</artnum><issn>1474-760X</issn><issn>1465-6906</issn><eissn>1474-760X</eissn><eissn>1465-6914</eissn><abstract>Social environmental influences on human health are well established in the epidemiology literature, but their functional genomic mechanisms are unclear. The present study analyzed genome-wide transcriptional activity in people who chronically experienced high versus low levels of subjective social isolation (loneliness) to assess alterations in the activity of transcription control pathways that might contribute to increased adverse health outcomes in social isolates.
DNA microarray analysis identified 209 genes that were differentially expressed in circulating leukocytes from 14 high- versus low-lonely individuals, including up-regulation of genes involved in immune activation, transcription control, and cell proliferation, and down-regulation of genes supporting mature B lymphocyte function and type I interferon response. Promoter-based bioinformatic analyses showed under-expression of genes bearing anti-inflammatory glucocorticoid response elements (GREs; p = 0.032) and over-expression of genes bearing response elements for pro-inflammatory NF-kappaB/Rel transcription factors (p = 0.011). This reciprocal shift in pro- and anti-inflammatory signaling was not attributable to differences in circulating cortisol levels, or to other demographic, psychological, or medical characteristics. Additional transcription control pathways showing differential activity in bioinformatic analyses included the CREB/ATF, JAK/STAT, IRF1, C/EBP, Oct, and GATA pathways.
These data provide the first indication that human genome-wide transcriptional activity is altered in association with a social epidemiological risk factor. Impaired transcription of glucocorticoid response genes and increased activity of pro-inflammatory transcription control pathways provide a functional genomic explanation for elevated risk of inflammatory disease in individuals who experience chronically high levels of subjective social isolation.</abstract><cop>England</cop><pub>BioMed Central Ltd</pub><pmid>17854483</pmid><doi>10.1186/gb-2007-8-9-r189</doi><tpages>R189</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Aged B-lymphocytes bioinformatics C-Reactive Protein - metabolism cell proliferation Computational Biology - methods cortisol DNA microarrays epidemiology Female Gene expression Gene Expression Regulation gene overexpression genes Genome, Human Glucocorticoids - metabolism Health aspects human health Humans interferons Interpersonal Relations Leukocytes Leukocytes - metabolism Male Middle Aged Models, Biological Promoter Regions, Genetic response elements risk factors Signal Transduction Social isolation transcription (genetics) transcription factors |
title | Social regulation of gene expression in human leukocytes |
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