Sequence of the lid affects activity and specificity of Candida rugosa lipase isoenzymes
The fungus Candida rugosa produces multiple lipase isoenzymes (CRLs) with distinct differences in substrate specificity, in particular with regard to selectivity toward the fatty acyl chain length. Moreover, isoform CRL3 displays high activity towards cholesterol esters. Lipase isoenzymes share over...
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description | The fungus Candida rugosa produces multiple lipase isoenzymes (CRLs) with distinct differences in substrate specificity, in particular with regard to selectivity toward the fatty acyl chain length. Moreover, isoform CRL3 displays high activity towards cholesterol esters. Lipase isoenzymes share over 80% sequence identity but diverge in the sequence of the lid, a mobile loop that modulates access to the active site. In the active enzyme conformation, the open lid participates in the substrate‐binding site and contributes to substrate recognition. To address the role of the lid in CRL activity and specificity, we substituted the lid sequences from isoenzymes CRL3 and CRL4 in recombinant rCRL1, thus obtaining enzymes differing only in this stretch of residues. Swapping the CRL3 lid was sufficient to confer to CRL1 cholesterol esterase activity. On the other hand, a specific shift in the chain‐length specificity was not observed. Chimeric proteins displayed different sensitivity to detergents in the reaction medium. |
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Moreover, isoform CRL3 displays high activity towards cholesterol esters. Lipase isoenzymes share over 80% sequence identity but diverge in the sequence of the lid, a mobile loop that modulates access to the active site. In the active enzyme conformation, the open lid participates in the substrate‐binding site and contributes to substrate recognition. To address the role of the lid in CRL activity and specificity, we substituted the lid sequences from isoenzymes CRL3 and CRL4 in recombinant rCRL1, thus obtaining enzymes differing only in this stretch of residues. Swapping the CRL3 lid was sufficient to confer to CRL1 cholesterol esterase activity. On the other hand, a specific shift in the chain‐length specificity was not observed. Chimeric proteins displayed different sensitivity to detergents in the reaction medium.</description><identifier>ISSN: 0961-8368</identifier><identifier>EISSN: 1469-896X</identifier><identifier>DOI: 10.1110/ps.0304003</identifier><identifier>PMID: 14500889</identifier><language>eng</language><publisher>Bristol: Cold Spring Harbor Laboratory Press</publisher><subject>1-Octanol - metabolism ; Amino Acid Sequence ; Blotting, Western ; Candida - enzymology ; Catalysis ; Catalytic Domain - genetics ; Catalytic Domain - physiology ; cholesterol esterase ; Cholesterol Esters - metabolism ; CMC, critical micellar concentration ; CRLs, Candida rugosa lipases ; Detergents - pharmacology ; domain grafting ; Esterification ; Fatty Acids - chemistry ; Fatty Acids - metabolism ; Gene Expression ; Hydrolysis ; Isoenzymes - chemistry ; Isoenzymes - genetics ; Isoenzymes - metabolism ; Kinetics ; lid ; Lipase ; Lipase - chemistry ; Lipase - genetics ; Lipase - metabolism ; Lipolysis - drug effects ; Molecular Sequence Data ; Pichia - genetics ; Recombinant Fusion Proteins - genetics ; Recombinant Fusion Proteins - isolation & purification ; Recombinant Fusion Proteins - metabolism ; Sterol Esterase - metabolism ; Structure-Activity Relationship ; substrate recognition ; Substrate Specificity - genetics ; TFE, 2,2,2‐tifluoroethyl ; Toluene - pharmacology ; Trifluoroethanol - analogs & derivatives ; Trifluoroethanol - metabolism ; Triglycerides - metabolism ; Triolein - metabolism</subject><ispartof>Protein science, 2003-10, Vol.12 (10), p.2312-2319</ispartof><rights>Copyright © 2003 The Protein Society</rights><rights>Copyright © Copyright 2003 The Protein Society</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4822-eb21424cf22b2eef7dc8ff0931c11904926dcbd161129fb314ce3f642a198cf73</citedby><cites>FETCH-LOGICAL-c4822-eb21424cf22b2eef7dc8ff0931c11904926dcbd161129fb314ce3f642a198cf73</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2366935/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2366935/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,727,780,784,885,1417,1433,27924,27925,45574,45575,46409,46833,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/14500889$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Brocca, Stefania</creatorcontrib><creatorcontrib>Secundo, Francesco</creatorcontrib><creatorcontrib>Ossola, Mattia</creatorcontrib><creatorcontrib>Alberghina, Lilia</creatorcontrib><creatorcontrib>Carrea, Giacomo</creatorcontrib><creatorcontrib>Lotti, Marina</creatorcontrib><title>Sequence of the lid affects activity and specificity of Candida rugosa lipase isoenzymes</title><title>Protein science</title><addtitle>Protein Sci</addtitle><description>The fungus Candida rugosa produces multiple lipase isoenzymes (CRLs) with distinct differences in substrate specificity, in particular with regard to selectivity toward the fatty acyl chain length. Moreover, isoform CRL3 displays high activity towards cholesterol esters. Lipase isoenzymes share over 80% sequence identity but diverge in the sequence of the lid, a mobile loop that modulates access to the active site. In the active enzyme conformation, the open lid participates in the substrate‐binding site and contributes to substrate recognition. To address the role of the lid in CRL activity and specificity, we substituted the lid sequences from isoenzymes CRL3 and CRL4 in recombinant rCRL1, thus obtaining enzymes differing only in this stretch of residues. Swapping the CRL3 lid was sufficient to confer to CRL1 cholesterol esterase activity. On the other hand, a specific shift in the chain‐length specificity was not observed. Chimeric proteins displayed different sensitivity to detergents in the reaction medium.</description><subject>1-Octanol - metabolism</subject><subject>Amino Acid Sequence</subject><subject>Blotting, Western</subject><subject>Candida - enzymology</subject><subject>Catalysis</subject><subject>Catalytic Domain - genetics</subject><subject>Catalytic Domain - physiology</subject><subject>cholesterol esterase</subject><subject>Cholesterol Esters - metabolism</subject><subject>CMC, critical micellar concentration</subject><subject>CRLs, Candida rugosa lipases</subject><subject>Detergents - pharmacology</subject><subject>domain grafting</subject><subject>Esterification</subject><subject>Fatty Acids - chemistry</subject><subject>Fatty Acids - metabolism</subject><subject>Gene Expression</subject><subject>Hydrolysis</subject><subject>Isoenzymes - chemistry</subject><subject>Isoenzymes - genetics</subject><subject>Isoenzymes - metabolism</subject><subject>Kinetics</subject><subject>lid</subject><subject>Lipase</subject><subject>Lipase - chemistry</subject><subject>Lipase - genetics</subject><subject>Lipase - metabolism</subject><subject>Lipolysis - drug effects</subject><subject>Molecular Sequence Data</subject><subject>Pichia - genetics</subject><subject>Recombinant Fusion Proteins - genetics</subject><subject>Recombinant Fusion Proteins - isolation & purification</subject><subject>Recombinant Fusion Proteins - metabolism</subject><subject>Sterol Esterase - metabolism</subject><subject>Structure-Activity Relationship</subject><subject>substrate recognition</subject><subject>Substrate Specificity - genetics</subject><subject>TFE, 2,2,2‐tifluoroethyl</subject><subject>Toluene - pharmacology</subject><subject>Trifluoroethanol - analogs & derivatives</subject><subject>Trifluoroethanol - metabolism</subject><subject>Triglycerides - metabolism</subject><subject>Triolein - metabolism</subject><issn>0961-8368</issn><issn>1469-896X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2003</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kcFqGzEQhkVoiZ2klzxA0KmHwCYaSZalS6CYNC0YUtoUfBNa7chWWO9uVusU5-krY5Mml56Gmfnmn2F-Qs6BXQEAu-7SFRNMMiaOyBikMoU2avGBjJlRUGih9IicpPTIGJPAxTEZgZwwprUZk8UvfNpg45G2gQ4rpHWsqAsB_ZCo80N8jsOWuqaiqUMfQ_S7PLOzXIuVo_1m2SaXxzqXkMbUYvOyXWM6Ix-DqxN-OsRT8vvr7cPsWzG_v_s--zIvvNScF1hykFz6wHnJEcO08joEZgR4AMOk4aryZQUKgJtQCpAeRVCSOzDah6k4JTd73W5TrrHy2Ay9q23Xx7Xrt7Z10b7vNHFll-2z5UIpIyZZ4PNBoG_zK9Jg1zF5rGvXYLtJdjqZMtBGZvByD_q-TanH8LoEmN0ZYbtkD0Zk-OLtWf_Qw-czAHvgT6xx-x8p--PnPXAusnN_AQlelF8</recordid><startdate>200310</startdate><enddate>200310</enddate><creator>Brocca, Stefania</creator><creator>Secundo, Francesco</creator><creator>Ossola, Mattia</creator><creator>Alberghina, Lilia</creator><creator>Carrea, Giacomo</creator><creator>Lotti, Marina</creator><general>Cold Spring Harbor Laboratory Press</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>200310</creationdate><title>Sequence of the lid affects activity and specificity of Candida rugosa lipase isoenzymes</title><author>Brocca, Stefania ; Secundo, Francesco ; Ossola, Mattia ; Alberghina, Lilia ; Carrea, Giacomo ; Lotti, Marina</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4822-eb21424cf22b2eef7dc8ff0931c11904926dcbd161129fb314ce3f642a198cf73</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2003</creationdate><topic>1-Octanol - metabolism</topic><topic>Amino Acid Sequence</topic><topic>Blotting, Western</topic><topic>Candida - enzymology</topic><topic>Catalysis</topic><topic>Catalytic Domain - genetics</topic><topic>Catalytic Domain - physiology</topic><topic>cholesterol esterase</topic><topic>Cholesterol Esters - metabolism</topic><topic>CMC, critical micellar concentration</topic><topic>CRLs, Candida rugosa lipases</topic><topic>Detergents - pharmacology</topic><topic>domain grafting</topic><topic>Esterification</topic><topic>Fatty Acids - chemistry</topic><topic>Fatty Acids - metabolism</topic><topic>Gene Expression</topic><topic>Hydrolysis</topic><topic>Isoenzymes - chemistry</topic><topic>Isoenzymes - genetics</topic><topic>Isoenzymes - metabolism</topic><topic>Kinetics</topic><topic>lid</topic><topic>Lipase</topic><topic>Lipase - chemistry</topic><topic>Lipase - genetics</topic><topic>Lipase - metabolism</topic><topic>Lipolysis - drug effects</topic><topic>Molecular Sequence Data</topic><topic>Pichia - genetics</topic><topic>Recombinant Fusion Proteins - genetics</topic><topic>Recombinant Fusion Proteins - isolation & purification</topic><topic>Recombinant Fusion Proteins - metabolism</topic><topic>Sterol Esterase - metabolism</topic><topic>Structure-Activity Relationship</topic><topic>substrate recognition</topic><topic>Substrate Specificity - genetics</topic><topic>TFE, 2,2,2‐tifluoroethyl</topic><topic>Toluene - pharmacology</topic><topic>Trifluoroethanol - analogs & derivatives</topic><topic>Trifluoroethanol - metabolism</topic><topic>Triglycerides - metabolism</topic><topic>Triolein - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Brocca, Stefania</creatorcontrib><creatorcontrib>Secundo, Francesco</creatorcontrib><creatorcontrib>Ossola, Mattia</creatorcontrib><creatorcontrib>Alberghina, Lilia</creatorcontrib><creatorcontrib>Carrea, Giacomo</creatorcontrib><creatorcontrib>Lotti, Marina</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Protein science</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Brocca, Stefania</au><au>Secundo, Francesco</au><au>Ossola, Mattia</au><au>Alberghina, Lilia</au><au>Carrea, Giacomo</au><au>Lotti, Marina</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Sequence of the lid affects activity and specificity of Candida rugosa lipase isoenzymes</atitle><jtitle>Protein science</jtitle><addtitle>Protein Sci</addtitle><date>2003-10</date><risdate>2003</risdate><volume>12</volume><issue>10</issue><spage>2312</spage><epage>2319</epage><pages>2312-2319</pages><issn>0961-8368</issn><eissn>1469-896X</eissn><abstract>The fungus Candida rugosa produces multiple lipase isoenzymes (CRLs) with distinct differences in substrate specificity, in particular with regard to selectivity toward the fatty acyl chain length. Moreover, isoform CRL3 displays high activity towards cholesterol esters. Lipase isoenzymes share over 80% sequence identity but diverge in the sequence of the lid, a mobile loop that modulates access to the active site. In the active enzyme conformation, the open lid participates in the substrate‐binding site and contributes to substrate recognition. To address the role of the lid in CRL activity and specificity, we substituted the lid sequences from isoenzymes CRL3 and CRL4 in recombinant rCRL1, thus obtaining enzymes differing only in this stretch of residues. Swapping the CRL3 lid was sufficient to confer to CRL1 cholesterol esterase activity. On the other hand, a specific shift in the chain‐length specificity was not observed. Chimeric proteins displayed different sensitivity to detergents in the reaction medium.</abstract><cop>Bristol</cop><pub>Cold Spring Harbor Laboratory Press</pub><pmid>14500889</pmid><doi>10.1110/ps.0304003</doi><tpages>8</tpages><oa>free_for_read</oa></addata></record> |
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subjects | 1-Octanol - metabolism Amino Acid Sequence Blotting, Western Candida - enzymology Catalysis Catalytic Domain - genetics Catalytic Domain - physiology cholesterol esterase Cholesterol Esters - metabolism CMC, critical micellar concentration CRLs, Candida rugosa lipases Detergents - pharmacology domain grafting Esterification Fatty Acids - chemistry Fatty Acids - metabolism Gene Expression Hydrolysis Isoenzymes - chemistry Isoenzymes - genetics Isoenzymes - metabolism Kinetics lid Lipase Lipase - chemistry Lipase - genetics Lipase - metabolism Lipolysis - drug effects Molecular Sequence Data Pichia - genetics Recombinant Fusion Proteins - genetics Recombinant Fusion Proteins - isolation & purification Recombinant Fusion Proteins - metabolism Sterol Esterase - metabolism Structure-Activity Relationship substrate recognition Substrate Specificity - genetics TFE, 2,2,2‐tifluoroethyl Toluene - pharmacology Trifluoroethanol - analogs & derivatives Trifluoroethanol - metabolism Triglycerides - metabolism Triolein - metabolism |
title | Sequence of the lid affects activity and specificity of Candida rugosa lipase isoenzymes |
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