Transmembrane helices that form two opposite homodimeric interactions: An asparagine scan study of αM and β2 integrins

Integrins are α/β heterodimers, but recent in vitro and in vivo experiments also suggest an ability to associate through their transmembrane domains to form homomeric interactions. While the results of some in vitro experiments are consistent with an interaction mediated by a GxxxG‐like motif, homo‐...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Protein science 2008-05, Vol.17 (5), p.930-938
Hauptverfasser: Parthasarathy, Krupakar, Lin, Xin, Tan, Suet Mien, Law, S.K. Alex, Torres, Jaume
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 938
container_issue 5
container_start_page 930
container_title Protein science
container_volume 17
creator Parthasarathy, Krupakar
Lin, Xin
Tan, Suet Mien
Law, S.K. Alex
Torres, Jaume
description Integrins are α/β heterodimers, but recent in vitro and in vivo experiments also suggest an ability to associate through their transmembrane domains to form homomeric interactions. While the results of some in vitro experiments are consistent with an interaction mediated by a GxxxG‐like motif, homo‐oligomers observed after in vivo cross‐linking are consistent with an almost opposite helix–helix interface. We have shown recently that both models of interaction are compatible with evolutionary conservation data, and we predicted that the α‐helices in both models would have a similar rotational orientation. Herein, we have tested our prediction using in vitro asparagine scan of five consecutive residues along the GxxxG‐like motif of the transmembrane domain of α and β integrins, αM and β2. We show that Asn‐mediated dimerization occurs twice for every turn of the helix, consistent with two almost opposite forms of interaction as suggested previously for αIIb and β3 transmembrane domains. The orientational parameters helix tilt and rotational orientation of each of these two Asn‐stabilized dimers were measured by site‐specific infrared dichroism (SSID) in model lipid bilayers and were found to be consistent with our predicted computational models. Our results highlight an intrinsic tendency for integrin transmembrane α‐helices to form two opposite types of homomeric interaction in addition to their heteromeric interactions and suggest that integrins may form complex and specific networks at the transmembrane domain during function.
doi_str_mv 10.1110/ps.073234208
format Article
fullrecord <record><control><sourceid>wiley_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_2327277</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>PRO930</sourcerecordid><originalsourceid>FETCH-LOGICAL-c2840-8354683353b8e15b3e0cec37940ba3a0418bf10e2472dea06ef7f82b518915453</originalsourceid><addsrcrecordid>eNp9kd1KAzEQhYMotlbvfIA8gK352Z-sF0IR_6BSkQrehWx2to3sJkuytfax9EH6TK5WCt54NTDnnI8ZDkKnlIwopeS8CSOScsYjRsQe6tMoyYYiS172UZ9kCR0KnogeOgrhlRASUcYPUY92y4xmoo_eZ17ZUEOddxPwAiqjIeB2oVpcOl_jduWwaxoXTNvJrnaFqcEbjY1twSvdGmfDBR5brEKjvJqbDhO0sji0y2KNXYk3Hw9Y2QJvPtlPau6NDcfooFRVgJPfOUDPN9ezq7vhZHp7fzWeDDUTEemuj6NEcB7zXACNcw5Eg-ZpFpFccdU9JPKSEmBRygpQJIEyLQXLYyoyGkcxH6DLLbdZ5jUUGmzrVSUbb2rl19IpI_8q1izk3L1JxlnK0rQDnG0B2rsQPJS7LCXyuwHZBLlroLOTrX1lKlj_65WPT9OME_4FPDqKdA</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype></control><display><type>article</type><title>Transmembrane helices that form two opposite homodimeric interactions: An asparagine scan study of αM and β2 integrins</title><source>PubMed (Medline)</source><source>Wiley Online Library Free Content</source><source>Wiley-Blackwell Full Collection</source><source>Free Full-Text Journals in Chemistry</source><source>EZB Electronic Journals Library</source><creator>Parthasarathy, Krupakar ; Lin, Xin ; Tan, Suet Mien ; Law, S.K. Alex ; Torres, Jaume</creator><creatorcontrib>Parthasarathy, Krupakar ; Lin, Xin ; Tan, Suet Mien ; Law, S.K. Alex ; Torres, Jaume</creatorcontrib><description>Integrins are α/β heterodimers, but recent in vitro and in vivo experiments also suggest an ability to associate through their transmembrane domains to form homomeric interactions. While the results of some in vitro experiments are consistent with an interaction mediated by a GxxxG‐like motif, homo‐oligomers observed after in vivo cross‐linking are consistent with an almost opposite helix–helix interface. We have shown recently that both models of interaction are compatible with evolutionary conservation data, and we predicted that the α‐helices in both models would have a similar rotational orientation. Herein, we have tested our prediction using in vitro asparagine scan of five consecutive residues along the GxxxG‐like motif of the transmembrane domain of α and β integrins, αM and β2. We show that Asn‐mediated dimerization occurs twice for every turn of the helix, consistent with two almost opposite forms of interaction as suggested previously for αIIb and β3 transmembrane domains. The orientational parameters helix tilt and rotational orientation of each of these two Asn‐stabilized dimers were measured by site‐specific infrared dichroism (SSID) in model lipid bilayers and were found to be consistent with our predicted computational models. Our results highlight an intrinsic tendency for integrin transmembrane α‐helices to form two opposite types of homomeric interaction in addition to their heteromeric interactions and suggest that integrins may form complex and specific networks at the transmembrane domain during function.</description><identifier>ISSN: 0961-8368</identifier><identifier>EISSN: 1469-896X</identifier><identifier>DOI: 10.1110/ps.073234208</identifier><identifier>PMID: 18369198</identifier><language>eng</language><publisher>Bristol: Cold Spring Harbor Laboratory Press</publisher><subject>asparagine scan ; GxxxG motif ; infrared ; integrins ; oligomerization ; transmembrane</subject><ispartof>Protein science, 2008-05, Vol.17 (5), p.930-938</ispartof><rights>Copyright © 2008 The Protein Society</rights><rights>Copyright © 2008 The Protein Society 2008</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c2840-8354683353b8e15b3e0cec37940ba3a0418bf10e2472dea06ef7f82b518915453</citedby><cites>FETCH-LOGICAL-c2840-8354683353b8e15b3e0cec37940ba3a0418bf10e2472dea06ef7f82b518915453</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2327277/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2327277/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,723,776,780,881,1411,1427,27901,27902,45550,45551,46384,46808,53766,53768</link.rule.ids></links><search><creatorcontrib>Parthasarathy, Krupakar</creatorcontrib><creatorcontrib>Lin, Xin</creatorcontrib><creatorcontrib>Tan, Suet Mien</creatorcontrib><creatorcontrib>Law, S.K. Alex</creatorcontrib><creatorcontrib>Torres, Jaume</creatorcontrib><title>Transmembrane helices that form two opposite homodimeric interactions: An asparagine scan study of αM and β2 integrins</title><title>Protein science</title><description>Integrins are α/β heterodimers, but recent in vitro and in vivo experiments also suggest an ability to associate through their transmembrane domains to form homomeric interactions. While the results of some in vitro experiments are consistent with an interaction mediated by a GxxxG‐like motif, homo‐oligomers observed after in vivo cross‐linking are consistent with an almost opposite helix–helix interface. We have shown recently that both models of interaction are compatible with evolutionary conservation data, and we predicted that the α‐helices in both models would have a similar rotational orientation. Herein, we have tested our prediction using in vitro asparagine scan of five consecutive residues along the GxxxG‐like motif of the transmembrane domain of α and β integrins, αM and β2. We show that Asn‐mediated dimerization occurs twice for every turn of the helix, consistent with two almost opposite forms of interaction as suggested previously for αIIb and β3 transmembrane domains. The orientational parameters helix tilt and rotational orientation of each of these two Asn‐stabilized dimers were measured by site‐specific infrared dichroism (SSID) in model lipid bilayers and were found to be consistent with our predicted computational models. Our results highlight an intrinsic tendency for integrin transmembrane α‐helices to form two opposite types of homomeric interaction in addition to their heteromeric interactions and suggest that integrins may form complex and specific networks at the transmembrane domain during function.</description><subject>asparagine scan</subject><subject>GxxxG motif</subject><subject>infrared</subject><subject>integrins</subject><subject>oligomerization</subject><subject>transmembrane</subject><issn>0961-8368</issn><issn>1469-896X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2008</creationdate><recordtype>article</recordtype><recordid>eNp9kd1KAzEQhYMotlbvfIA8gK352Z-sF0IR_6BSkQrehWx2to3sJkuytfax9EH6TK5WCt54NTDnnI8ZDkKnlIwopeS8CSOScsYjRsQe6tMoyYYiS172UZ9kCR0KnogeOgrhlRASUcYPUY92y4xmoo_eZ17ZUEOddxPwAiqjIeB2oVpcOl_jduWwaxoXTNvJrnaFqcEbjY1twSvdGmfDBR5brEKjvJqbDhO0sji0y2KNXYk3Hw9Y2QJvPtlPau6NDcfooFRVgJPfOUDPN9ezq7vhZHp7fzWeDDUTEemuj6NEcB7zXACNcw5Eg-ZpFpFccdU9JPKSEmBRygpQJIEyLQXLYyoyGkcxH6DLLbdZ5jUUGmzrVSUbb2rl19IpI_8q1izk3L1JxlnK0rQDnG0B2rsQPJS7LCXyuwHZBLlroLOTrX1lKlj_65WPT9OME_4FPDqKdA</recordid><startdate>200805</startdate><enddate>200805</enddate><creator>Parthasarathy, Krupakar</creator><creator>Lin, Xin</creator><creator>Tan, Suet Mien</creator><creator>Law, S.K. Alex</creator><creator>Torres, Jaume</creator><general>Cold Spring Harbor Laboratory Press</general><scope>AAYXX</scope><scope>CITATION</scope><scope>5PM</scope></search><sort><creationdate>200805</creationdate><title>Transmembrane helices that form two opposite homodimeric interactions: An asparagine scan study of αM and β2 integrins</title><author>Parthasarathy, Krupakar ; Lin, Xin ; Tan, Suet Mien ; Law, S.K. Alex ; Torres, Jaume</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c2840-8354683353b8e15b3e0cec37940ba3a0418bf10e2472dea06ef7f82b518915453</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2008</creationdate><topic>asparagine scan</topic><topic>GxxxG motif</topic><topic>infrared</topic><topic>integrins</topic><topic>oligomerization</topic><topic>transmembrane</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Parthasarathy, Krupakar</creatorcontrib><creatorcontrib>Lin, Xin</creatorcontrib><creatorcontrib>Tan, Suet Mien</creatorcontrib><creatorcontrib>Law, S.K. Alex</creatorcontrib><creatorcontrib>Torres, Jaume</creatorcontrib><collection>CrossRef</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Protein science</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Parthasarathy, Krupakar</au><au>Lin, Xin</au><au>Tan, Suet Mien</au><au>Law, S.K. Alex</au><au>Torres, Jaume</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Transmembrane helices that form two opposite homodimeric interactions: An asparagine scan study of αM and β2 integrins</atitle><jtitle>Protein science</jtitle><date>2008-05</date><risdate>2008</risdate><volume>17</volume><issue>5</issue><spage>930</spage><epage>938</epage><pages>930-938</pages><issn>0961-8368</issn><eissn>1469-896X</eissn><abstract>Integrins are α/β heterodimers, but recent in vitro and in vivo experiments also suggest an ability to associate through their transmembrane domains to form homomeric interactions. While the results of some in vitro experiments are consistent with an interaction mediated by a GxxxG‐like motif, homo‐oligomers observed after in vivo cross‐linking are consistent with an almost opposite helix–helix interface. We have shown recently that both models of interaction are compatible with evolutionary conservation data, and we predicted that the α‐helices in both models would have a similar rotational orientation. Herein, we have tested our prediction using in vitro asparagine scan of five consecutive residues along the GxxxG‐like motif of the transmembrane domain of α and β integrins, αM and β2. We show that Asn‐mediated dimerization occurs twice for every turn of the helix, consistent with two almost opposite forms of interaction as suggested previously for αIIb and β3 transmembrane domains. The orientational parameters helix tilt and rotational orientation of each of these two Asn‐stabilized dimers were measured by site‐specific infrared dichroism (SSID) in model lipid bilayers and were found to be consistent with our predicted computational models. Our results highlight an intrinsic tendency for integrin transmembrane α‐helices to form two opposite types of homomeric interaction in addition to their heteromeric interactions and suggest that integrins may form complex and specific networks at the transmembrane domain during function.</abstract><cop>Bristol</cop><pub>Cold Spring Harbor Laboratory Press</pub><pmid>18369198</pmid><doi>10.1110/ps.073234208</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 0961-8368
ispartof Protein science, 2008-05, Vol.17 (5), p.930-938
issn 0961-8368
1469-896X
language eng
recordid cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_2327277
source PubMed (Medline); Wiley Online Library Free Content; Wiley-Blackwell Full Collection; Free Full-Text Journals in Chemistry; EZB Electronic Journals Library
subjects asparagine scan
GxxxG motif
infrared
integrins
oligomerization
transmembrane
title Transmembrane helices that form two opposite homodimeric interactions: An asparagine scan study of αM and β2 integrins
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-29T07%3A41%3A03IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-wiley_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Transmembrane%20helices%20that%20form%20two%20opposite%20homodimeric%20interactions:%20An%20asparagine%20scan%20study%20of%20%CE%B1M%20and%20%CE%B22%20integrins&rft.jtitle=Protein%20science&rft.au=Parthasarathy,%20Krupakar&rft.date=2008-05&rft.volume=17&rft.issue=5&rft.spage=930&rft.epage=938&rft.pages=930-938&rft.issn=0961-8368&rft.eissn=1469-896X&rft_id=info:doi/10.1110/ps.073234208&rft_dat=%3Cwiley_pubme%3EPRO930%3C/wiley_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_id=info:pmid/18369198&rfr_iscdi=true