Metabolism of halophilic archaea
In spite of their common hypersaline environment, halophilic archaea are surprisingly different in their nutritional demands and metabolic pathways. The metabolic diversity of halophilic archaea was investigated at the genomic level through systematic metabolic reconstruction and comparative analysi...
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| Veröffentlicht in: | Extremophiles : life under extreme conditions 2008-03, Vol.12 (2), p.177-196 |
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| container_title | Extremophiles : life under extreme conditions |
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| creator | Falb, Michaela Müller, Kerstin Königsmaier, Lisa Oberwinkler, Tanja Horn, Patrick von Gronau, Susanne Gonzalez, Orland Pfeiffer, Friedhelm Bornberg-Bauer, Erich Oesterhelt, Dieter |
| description | In spite of their common hypersaline environment, halophilic archaea are surprisingly different in their nutritional demands and metabolic pathways. The metabolic diversity of halophilic archaea was investigated at the genomic level through systematic metabolic reconstruction and comparative analysis of four completely sequenced species: Halobacterium salinarum, Haloarcula marismortui, Haloquadratum walsbyi, and the haloalkaliphile Natronomonas pharaonis. The comparative study reveals different sets of enzyme genes amongst halophilic archaea, e.g. in glycerol degradation, pentose metabolism, and folate synthesis. The carefully assessed metabolic data represent a reliable resource for future system biology approaches as it also links to current experimental data on (halo)archaea from the literature. |
| doi_str_mv | 10.1007/s00792-008-0138-x |
| format | Article |
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The metabolic diversity of halophilic archaea was investigated at the genomic level through systematic metabolic reconstruction and comparative analysis of four completely sequenced species: Halobacterium salinarum, Haloarcula marismortui, Haloquadratum walsbyi, and the haloalkaliphile Natronomonas pharaonis. The comparative study reveals different sets of enzyme genes amongst halophilic archaea, e.g. in glycerol degradation, pentose metabolism, and folate synthesis. The carefully assessed metabolic data represent a reliable resource for future system biology approaches as it also links to current experimental data on (halo)archaea from the literature.</description><identifier>ISSN: 1431-0651</identifier><identifier>EISSN: 1433-4909</identifier><identifier>DOI: 10.1007/s00792-008-0138-x</identifier><identifier>PMID: 18278431</identifier><language>eng</language><publisher>Japan: Japan : Springer Japan</publisher><subject>Archaea ; Bacteria ; Bacteriology ; Biochemistry ; Biological and medical sciences ; Biomedical and Life Sciences ; Biotechnology ; Comparative studies ; Enzymes ; Euryarchaeota - physiology ; Folic Acid - biosynthesis ; Fundamental and applied biological sciences. Psychology ; Genome, Archaeal - physiology ; Genomics ; Glycerol - metabolism ; Haloarcula marismortui ; Halobacterium salinarum ; Life Sciences ; Metabolism ; Metabolism. Enzymes ; Microbial Ecology ; Microbiology ; Pentoses - metabolism ; Review ; Space life sciences</subject><ispartof>Extremophiles : life under extreme conditions, 2008-03, Vol.12 (2), p.177-196</ispartof><rights>Springer 2008</rights><rights>2008 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c552t-1bbb934113aad20ccd527890e58297e5375544d0a45982047ee4bbefa48bcc833</citedby><cites>FETCH-LOGICAL-c552t-1bbb934113aad20ccd527890e58297e5375544d0a45982047ee4bbefa48bcc833</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00792-008-0138-x$$EPDF$$P50$$Gspringer$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00792-008-0138-x$$EHTML$$P50$$Gspringer$$Hfree_for_read</linktohtml><link.rule.ids>230,314,776,780,881,27901,27902,41464,42533,51294</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=20274109$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/18278431$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Falb, Michaela</creatorcontrib><creatorcontrib>Müller, Kerstin</creatorcontrib><creatorcontrib>Königsmaier, Lisa</creatorcontrib><creatorcontrib>Oberwinkler, Tanja</creatorcontrib><creatorcontrib>Horn, Patrick</creatorcontrib><creatorcontrib>von Gronau, Susanne</creatorcontrib><creatorcontrib>Gonzalez, Orland</creatorcontrib><creatorcontrib>Pfeiffer, Friedhelm</creatorcontrib><creatorcontrib>Bornberg-Bauer, Erich</creatorcontrib><creatorcontrib>Oesterhelt, Dieter</creatorcontrib><title>Metabolism of halophilic archaea</title><title>Extremophiles : life under extreme conditions</title><addtitle>Extremophiles</addtitle><addtitle>Extremophiles</addtitle><description>In spite of their common hypersaline environment, halophilic archaea are surprisingly different in their nutritional demands and metabolic pathways. The metabolic diversity of halophilic archaea was investigated at the genomic level through systematic metabolic reconstruction and comparative analysis of four completely sequenced species: Halobacterium salinarum, Haloarcula marismortui, Haloquadratum walsbyi, and the haloalkaliphile Natronomonas pharaonis. The comparative study reveals different sets of enzyme genes amongst halophilic archaea, e.g. in glycerol degradation, pentose metabolism, and folate synthesis. The carefully assessed metabolic data represent a reliable resource for future system biology approaches as it also links to current experimental data on (halo)archaea from the literature.</description><subject>Archaea</subject><subject>Bacteria</subject><subject>Bacteriology</subject><subject>Biochemistry</subject><subject>Biological and medical sciences</subject><subject>Biomedical and Life Sciences</subject><subject>Biotechnology</subject><subject>Comparative studies</subject><subject>Enzymes</subject><subject>Euryarchaeota - physiology</subject><subject>Folic Acid - biosynthesis</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Genome, Archaeal - physiology</subject><subject>Genomics</subject><subject>Glycerol - metabolism</subject><subject>Haloarcula marismortui</subject><subject>Halobacterium salinarum</subject><subject>Life Sciences</subject><subject>Metabolism</subject><subject>Metabolism. 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| identifier | ISSN: 1431-0651 |
| ispartof | Extremophiles : life under extreme conditions, 2008-03, Vol.12 (2), p.177-196 |
| issn | 1431-0651 1433-4909 |
| language | eng |
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| source | MEDLINE; Springer Nature - Complete Springer Journals |
| subjects | Archaea Bacteria Bacteriology Biochemistry Biological and medical sciences Biomedical and Life Sciences Biotechnology Comparative studies Enzymes Euryarchaeota - physiology Folic Acid - biosynthesis Fundamental and applied biological sciences. Psychology Genome, Archaeal - physiology Genomics Glycerol - metabolism Haloarcula marismortui Halobacterium salinarum Life Sciences Metabolism Metabolism. Enzymes Microbial Ecology Microbiology Pentoses - metabolism Review Space life sciences |
| title | Metabolism of halophilic archaea |
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