Disruption of an intermonomer salt bridge in the p53 tetramerization domain results in an increased propensity to form amyloid fibrils
We describe in molecular detail how disruption of an intermonomer salt bridge (Arg337–Asp352) leads to partial destabilization of the p53 tetramerization domain and a dramatically increased propensity to form amyloid fibrils. At pH 4.0 and 37°C, a p53 tetramerization domain mutant (p53tet‐R337H), as...
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Veröffentlicht in: | Protein science 2005-12, Vol.14 (12), p.2993-3003 |
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description | We describe in molecular detail how disruption of an intermonomer salt bridge (Arg337–Asp352) leads to partial destabilization of the p53 tetramerization domain and a dramatically increased propensity to form amyloid fibrils. At pH 4.0 and 37°C, a p53 tetramerization domain mutant (p53tet‐R337H), associated with adrenocortical carcinoma in children, readily formed amyloid fibrils, while the wild‐type (p53tet‐wt) did not. We characterized these proteins by equilibrium denaturation, 13Cα secondary chemical shifts, {1H}‐15N heteronuclear NOEs, and H/D exchange. Although p53tet‐R337H was thermodynamically less stable, NMR data indicated that the two proteins had similar secondary structure and molecular dynamics. NMR derived pKa values indicated that at low pH the R337H mutation partially disrupted an intermonomer salt bridge. Backbone H/D exchange results showed that for at least a small population of p53tet‐R337H molecules disruption of this salt bridge resulted in partial destabilization of the protein. It is proposed that this decrease in p53tet‐R337H stability resulted in an increased propensity to form amyloid fibrils. |
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At pH 4.0 and 37°C, a p53 tetramerization domain mutant (p53tet‐R337H), associated with adrenocortical carcinoma in children, readily formed amyloid fibrils, while the wild‐type (p53tet‐wt) did not. We characterized these proteins by equilibrium denaturation, 13Cα secondary chemical shifts, {1H}‐15N heteronuclear NOEs, and H/D exchange. Although p53tet‐R337H was thermodynamically less stable, NMR data indicated that the two proteins had similar secondary structure and molecular dynamics. NMR derived pKa values indicated that at low pH the R337H mutation partially disrupted an intermonomer salt bridge. Backbone H/D exchange results showed that for at least a small population of p53tet‐R337H molecules disruption of this salt bridge resulted in partial destabilization of the protein. It is proposed that this decrease in p53tet‐R337H stability resulted in an increased propensity to form amyloid fibrils.</description><identifier>ISSN: 0961-8368</identifier><identifier>EISSN: 1469-896X</identifier><identifier>DOI: 10.1110/ps.051622005</identifier><identifier>PMID: 16260757</identifier><language>eng</language><publisher>Bristol: Cold Spring Harbor Laboratory Press</publisher><subject>Amyloid - chemistry ; Amyloid - metabolism ; amyloid fibrils ; Arginine - genetics ; Arginine - metabolism ; H/D exchange, hydrogen‐deuterium exchange ; Hydrogen - chemistry ; hydrogen exchange ; Hydrogen-Ion Concentration ; Models, Molecular ; Mutation - genetics ; NOE, nuclear Overhauser effect ; NOESY, nuclear Overhauser effect spectroscopy ; p53 tetramerization domain ; p53tet, p53 tetramerization domain ; p53tet‐R337H, p53 tetramerization domain mutant R337H ; p53tet‐wt, wild‐type p53 tetramerization domain ; pKa ; Protein Binding ; Protein Denaturation ; Protein Folding ; Protein Structure, Quaternary ; Protein Structure, Tertiary ; salt bridge ; Salts - chemistry ; Temperature ; Titrimetry ; TROSY, transverse relaxation optimized spectroscopy ; Tumor Suppressor Protein p53 - chemistry ; Tumor Suppressor Protein p53 - genetics ; Tumor Suppressor Protein p53 - metabolism</subject><ispartof>Protein science, 2005-12, Vol.14 (12), p.2993-3003</ispartof><rights>Copyright © 2005 The Protein Society</rights><rights>Copyright © Copyright 2005 The Protein Society</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4573-73a96d0d9356d4ed6eaa361e8787df0b639d036155b321d3097ecf63f67650aa3</citedby><cites>FETCH-LOGICAL-c4573-73a96d0d9356d4ed6eaa361e8787df0b639d036155b321d3097ecf63f67650aa3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2253254/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2253254/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,315,728,781,785,886,1418,1434,27929,27930,45579,45580,46414,46838,53796,53798</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/16260757$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Galea, Charles</creatorcontrib><creatorcontrib>Bowman, Prentice</creatorcontrib><creatorcontrib>Kriwacki, Richard W.</creatorcontrib><title>Disruption of an intermonomer salt bridge in the p53 tetramerization domain results in an increased propensity to form amyloid fibrils</title><title>Protein science</title><addtitle>Protein Sci</addtitle><description>We describe in molecular detail how disruption of an intermonomer salt bridge (Arg337–Asp352) leads to partial destabilization of the p53 tetramerization domain and a dramatically increased propensity to form amyloid fibrils. At pH 4.0 and 37°C, a p53 tetramerization domain mutant (p53tet‐R337H), associated with adrenocortical carcinoma in children, readily formed amyloid fibrils, while the wild‐type (p53tet‐wt) did not. We characterized these proteins by equilibrium denaturation, 13Cα secondary chemical shifts, {1H}‐15N heteronuclear NOEs, and H/D exchange. Although p53tet‐R337H was thermodynamically less stable, NMR data indicated that the two proteins had similar secondary structure and molecular dynamics. NMR derived pKa values indicated that at low pH the R337H mutation partially disrupted an intermonomer salt bridge. Backbone H/D exchange results showed that for at least a small population of p53tet‐R337H molecules disruption of this salt bridge resulted in partial destabilization of the protein. It is proposed that this decrease in p53tet‐R337H stability resulted in an increased propensity to form amyloid fibrils.</description><subject>Amyloid - chemistry</subject><subject>Amyloid - metabolism</subject><subject>amyloid fibrils</subject><subject>Arginine - genetics</subject><subject>Arginine - metabolism</subject><subject>H/D exchange, hydrogen‐deuterium exchange</subject><subject>Hydrogen - chemistry</subject><subject>hydrogen exchange</subject><subject>Hydrogen-Ion Concentration</subject><subject>Models, Molecular</subject><subject>Mutation - genetics</subject><subject>NOE, nuclear Overhauser effect</subject><subject>NOESY, nuclear Overhauser effect spectroscopy</subject><subject>p53 tetramerization domain</subject><subject>p53tet, p53 tetramerization domain</subject><subject>p53tet‐R337H, p53 tetramerization domain mutant R337H</subject><subject>p53tet‐wt, wild‐type p53 tetramerization domain</subject><subject>pKa</subject><subject>Protein Binding</subject><subject>Protein Denaturation</subject><subject>Protein Folding</subject><subject>Protein Structure, Quaternary</subject><subject>Protein Structure, Tertiary</subject><subject>salt bridge</subject><subject>Salts - chemistry</subject><subject>Temperature</subject><subject>Titrimetry</subject><subject>TROSY, transverse relaxation optimized spectroscopy</subject><subject>Tumor Suppressor Protein p53 - chemistry</subject><subject>Tumor Suppressor Protein p53 - genetics</subject><subject>Tumor Suppressor Protein p53 - metabolism</subject><issn>0961-8368</issn><issn>1469-896X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2005</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkU1rFTEUhkNR2mvtruuSlatOzcckmWwEaf2CQkUUugu5kzNtJDMZk0zl-gP83aa9l6obXR3I--ThHF6Ejik5o5SSl3M-I4JKxggRe2hFW6mbTsvrJ2hFtKRNx2V3gJ7l_JUQ0lLG99FBxSVRQq3Qzwuf0zIXHyccB2wn7KcCaYxTHCHhbEPB6-TdDdQAl1vAs-C4QEm25v6Hffjp4mhrnCAvoeR78kHUJ7AZHJ5TnGHKvmxwiXiIacR23IToHR58tYf8HD0dbMhwtJuH6MvbN5_P3zeXV-8-nL--bPpWKN4obrV0xGkupGvBSbCWSwqd6pQbyFpy7Uh9EGLNGXWcaAX9IPkglRSksofo1dY7L-sRXA9TPSSYOfnRpo2J1pu_k8nfmpt4ZxgTnIm2Cl7sBCl-WyAXM_rcQwh2grhkI7tOMMnZf0GqWtZpoip4ugX7FHNOMDxuQ4m5b9jM2Tw2XPGTPy_4De8qrQDfAt99gM0_ZebjpyvaMq05_wXgKbQt</recordid><startdate>200512</startdate><enddate>200512</enddate><creator>Galea, Charles</creator><creator>Bowman, Prentice</creator><creator>Kriwacki, Richard W.</creator><general>Cold Spring Harbor Laboratory Press</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>200512</creationdate><title>Disruption of an intermonomer salt bridge in the p53 tetramerization domain results in an increased propensity to form amyloid fibrils</title><author>Galea, Charles ; Bowman, Prentice ; Kriwacki, Richard W.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4573-73a96d0d9356d4ed6eaa361e8787df0b639d036155b321d3097ecf63f67650aa3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2005</creationdate><topic>Amyloid - chemistry</topic><topic>Amyloid - metabolism</topic><topic>amyloid fibrils</topic><topic>Arginine - genetics</topic><topic>Arginine - metabolism</topic><topic>H/D exchange, hydrogen‐deuterium exchange</topic><topic>Hydrogen - chemistry</topic><topic>hydrogen exchange</topic><topic>Hydrogen-Ion Concentration</topic><topic>Models, Molecular</topic><topic>Mutation - genetics</topic><topic>NOE, nuclear Overhauser effect</topic><topic>NOESY, nuclear Overhauser effect spectroscopy</topic><topic>p53 tetramerization domain</topic><topic>p53tet, p53 tetramerization domain</topic><topic>p53tet‐R337H, p53 tetramerization domain mutant R337H</topic><topic>p53tet‐wt, wild‐type p53 tetramerization domain</topic><topic>pKa</topic><topic>Protein Binding</topic><topic>Protein Denaturation</topic><topic>Protein Folding</topic><topic>Protein Structure, Quaternary</topic><topic>Protein Structure, Tertiary</topic><topic>salt bridge</topic><topic>Salts - chemistry</topic><topic>Temperature</topic><topic>Titrimetry</topic><topic>TROSY, transverse relaxation optimized spectroscopy</topic><topic>Tumor Suppressor Protein p53 - chemistry</topic><topic>Tumor Suppressor Protein p53 - genetics</topic><topic>Tumor Suppressor Protein p53 - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Galea, Charles</creatorcontrib><creatorcontrib>Bowman, Prentice</creatorcontrib><creatorcontrib>Kriwacki, Richard W.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Protein science</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Galea, Charles</au><au>Bowman, Prentice</au><au>Kriwacki, Richard W.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Disruption of an intermonomer salt bridge in the p53 tetramerization domain results in an increased propensity to form amyloid fibrils</atitle><jtitle>Protein science</jtitle><addtitle>Protein Sci</addtitle><date>2005-12</date><risdate>2005</risdate><volume>14</volume><issue>12</issue><spage>2993</spage><epage>3003</epage><pages>2993-3003</pages><issn>0961-8368</issn><eissn>1469-896X</eissn><abstract>We describe in molecular detail how disruption of an intermonomer salt bridge (Arg337–Asp352) leads to partial destabilization of the p53 tetramerization domain and a dramatically increased propensity to form amyloid fibrils. At pH 4.0 and 37°C, a p53 tetramerization domain mutant (p53tet‐R337H), associated with adrenocortical carcinoma in children, readily formed amyloid fibrils, while the wild‐type (p53tet‐wt) did not. We characterized these proteins by equilibrium denaturation, 13Cα secondary chemical shifts, {1H}‐15N heteronuclear NOEs, and H/D exchange. Although p53tet‐R337H was thermodynamically less stable, NMR data indicated that the two proteins had similar secondary structure and molecular dynamics. NMR derived pKa values indicated that at low pH the R337H mutation partially disrupted an intermonomer salt bridge. Backbone H/D exchange results showed that for at least a small population of p53tet‐R337H molecules disruption of this salt bridge resulted in partial destabilization of the protein. It is proposed that this decrease in p53tet‐R337H stability resulted in an increased propensity to form amyloid fibrils.</abstract><cop>Bristol</cop><pub>Cold Spring Harbor Laboratory Press</pub><pmid>16260757</pmid><doi>10.1110/ps.051622005</doi><tpages>11</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Amyloid - chemistry Amyloid - metabolism amyloid fibrils Arginine - genetics Arginine - metabolism H/D exchange, hydrogen‐deuterium exchange Hydrogen - chemistry hydrogen exchange Hydrogen-Ion Concentration Models, Molecular Mutation - genetics NOE, nuclear Overhauser effect NOESY, nuclear Overhauser effect spectroscopy p53 tetramerization domain p53tet, p53 tetramerization domain p53tet‐R337H, p53 tetramerization domain mutant R337H p53tet‐wt, wild‐type p53 tetramerization domain pKa Protein Binding Protein Denaturation Protein Folding Protein Structure, Quaternary Protein Structure, Tertiary salt bridge Salts - chemistry Temperature Titrimetry TROSY, transverse relaxation optimized spectroscopy Tumor Suppressor Protein p53 - chemistry Tumor Suppressor Protein p53 - genetics Tumor Suppressor Protein p53 - metabolism |
title | Disruption of an intermonomer salt bridge in the p53 tetramerization domain results in an increased propensity to form amyloid fibrils |
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