Solution structure of a single‐domain thiosulfate sulfurtransferase from Arabidopsis thaliana
We describe the three‐dimensional structure of the product of Arabidopsis thaliana gene At5g66040.1 as determined by NMR spectroscopy. This protein is categorized as single‐domain sulfurtransferase and is annotated as a senescence‐associated protein (sen1‐like protein) and ketoconazole resistance pr...
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Veröffentlicht in: | Protein science 2006-12, Vol.15 (12), p.2836-2841 |
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creator | Cornilescu, Gabriel Vinarov, Dmitriy A. Tyler, Ejan M. Markley, John L. Cornilescu, Claudia C. |
description | We describe the three‐dimensional structure of the product of Arabidopsis thaliana gene At5g66040.1 as determined by NMR spectroscopy. This protein is categorized as single‐domain sulfurtransferase and is annotated as a senescence‐associated protein (sen1‐like protein) and ketoconazole resistance protein (http://arabidopsis.org/info/genefamily/STR_genefamily.html). The sequence of At5g66040.1 is virtually identical to that of a protein from Arabidopsis found by others to confer ketoconazole resistance in yeast. Comparison of the three‐dimensional structure with those in the Protein Data Bank revealed that At5g66040.1 contains an additional mobile β‐hairpin not found in other rhodaneses that may function in binding specific substrates. This represents the first structure of a single‐domain plant sulfurtransferase. The enzymatically active cysteine‐containing domain belongs to the CDC25 class of phosphatases, sulfide dehydrogenases, and stress proteins such as senescence specific protein 1 in plants, PspE and GlpE in bacteria, and cyanide and arsenate resistance proteins. Versions of this domain that lack the active site cysteine are found in other proteins, such as phosphatases, ubiquitin hydrolases, and sulfuryltransferases. |
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This protein is categorized as single‐domain sulfurtransferase and is annotated as a senescence‐associated protein (sen1‐like protein) and ketoconazole resistance protein (http://arabidopsis.org/info/genefamily/STR_genefamily.html). The sequence of At5g66040.1 is virtually identical to that of a protein from Arabidopsis found by others to confer ketoconazole resistance in yeast. Comparison of the three‐dimensional structure with those in the Protein Data Bank revealed that At5g66040.1 contains an additional mobile β‐hairpin not found in other rhodaneses that may function in binding specific substrates. This represents the first structure of a single‐domain plant sulfurtransferase. The enzymatically active cysteine‐containing domain belongs to the CDC25 class of phosphatases, sulfide dehydrogenases, and stress proteins such as senescence specific protein 1 in plants, PspE and GlpE in bacteria, and cyanide and arsenate resistance proteins. Versions of this domain that lack the active site cysteine are found in other proteins, such as phosphatases, ubiquitin hydrolases, and sulfuryltransferases.</description><identifier>ISSN: 0961-8368</identifier><identifier>EISSN: 1469-896X</identifier><identifier>DOI: 10.1110/ps.062395206</identifier><identifier>PMID: 17088324</identifier><language>eng</language><publisher>Bristol: Cold Spring Harbor Laboratory Press</publisher><subject>Amino Acid Sequence ; Arabidopsis - enzymology ; Arabidopsis thaliana ; At5g66040.1 ; Center for Eukaryotic Structural Genomics ; CESG ; Models, Molecular ; Molecular Sequence Data ; NMR ; Nuclear Magnetic Resonance, Biomolecular - methods ; Protein Structure Report ; Protein Structure, Secondary ; Protein Structure, Tertiary ; rhodanese ; Sequence Homology, Amino Acid ; single‐domain sulfurtransferase ; Solutions - analysis ; Structural Homology, Protein ; Thiosulfate Sulfurtransferase - chemistry</subject><ispartof>Protein science, 2006-12, Vol.15 (12), p.2836-2841</ispartof><rights>Copyright © 2006 The Protein Society</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4576-28422862a2f50d3c49c51d21de84c1c2f531dfcb5ca060dcbab5b8f7aff4e0fd3</citedby><cites>FETCH-LOGICAL-c4576-28422862a2f50d3c49c51d21de84c1c2f531dfcb5ca060dcbab5b8f7aff4e0fd3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2242445/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2242445/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,723,776,780,881,1411,1427,27901,27902,45550,45551,46384,46808,53766,53768</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/17088324$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Cornilescu, Gabriel</creatorcontrib><creatorcontrib>Vinarov, Dmitriy A.</creatorcontrib><creatorcontrib>Tyler, Ejan M.</creatorcontrib><creatorcontrib>Markley, John L.</creatorcontrib><creatorcontrib>Cornilescu, Claudia C.</creatorcontrib><title>Solution structure of a single‐domain thiosulfate sulfurtransferase from Arabidopsis thaliana</title><title>Protein science</title><addtitle>Protein Sci</addtitle><description>We describe the three‐dimensional structure of the product of Arabidopsis thaliana gene At5g66040.1 as determined by NMR spectroscopy. This protein is categorized as single‐domain sulfurtransferase and is annotated as a senescence‐associated protein (sen1‐like protein) and ketoconazole resistance protein (http://arabidopsis.org/info/genefamily/STR_genefamily.html). The sequence of At5g66040.1 is virtually identical to that of a protein from Arabidopsis found by others to confer ketoconazole resistance in yeast. Comparison of the three‐dimensional structure with those in the Protein Data Bank revealed that At5g66040.1 contains an additional mobile β‐hairpin not found in other rhodaneses that may function in binding specific substrates. This represents the first structure of a single‐domain plant sulfurtransferase. The enzymatically active cysteine‐containing domain belongs to the CDC25 class of phosphatases, sulfide dehydrogenases, and stress proteins such as senescence specific protein 1 in plants, PspE and GlpE in bacteria, and cyanide and arsenate resistance proteins. Versions of this domain that lack the active site cysteine are found in other proteins, such as phosphatases, ubiquitin hydrolases, and sulfuryltransferases.</description><subject>Amino Acid Sequence</subject><subject>Arabidopsis - enzymology</subject><subject>Arabidopsis thaliana</subject><subject>At5g66040.1</subject><subject>Center for Eukaryotic Structural Genomics</subject><subject>CESG</subject><subject>Models, Molecular</subject><subject>Molecular Sequence Data</subject><subject>NMR</subject><subject>Nuclear Magnetic Resonance, Biomolecular - methods</subject><subject>Protein Structure Report</subject><subject>Protein Structure, Secondary</subject><subject>Protein Structure, Tertiary</subject><subject>rhodanese</subject><subject>Sequence Homology, Amino Acid</subject><subject>single‐domain sulfurtransferase</subject><subject>Solutions - analysis</subject><subject>Structural Homology, Protein</subject><subject>Thiosulfate Sulfurtransferase - chemistry</subject><issn>0961-8368</issn><issn>1469-896X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2006</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkU1rFTEUhoMo9lrduZZZuXJqcpLJTTZCKWqFQsUPcBcy-WgjmcmYM1Ppzp_gb-wvccq9VN3o6sA5Dy_v4SHkKaNHjDH6csIjKoHrDqi8RzZMSN0qLb_cJxuqJWsVl-qAPEL8SikVDPhDcsC2VCkOYkPMx5KXOZWxwbkubl5qaEpsbINpvMjh5sdPXwabxma-TAWXHO0cmtu51LnaEWOoFkMTaxma42r75MuECVfc5mRH-5g8iDZjeLKfh-Tzm9efTk7bs_O3706Oz1onuq1sQQkAJcFC7KjnTmjXMQ_MByUcc-uWMx9d3zlLJfWut33Xq7i1MYpAo-eH5NUud1r6IXgXxrVeNlNNg63Xpthk_r6M6dJclCsDIECIbg14vg-o5dsScDZDQhdytmMoCxqpgDIK-r8g00oIrWEFX-xAVwtiDfGuDaPmVp2Z0NypW_Fnf37wG967WgG-A76nHK7_GWbefzhnHazq-S8lAKjp</recordid><startdate>200612</startdate><enddate>200612</enddate><creator>Cornilescu, Gabriel</creator><creator>Vinarov, Dmitriy A.</creator><creator>Tyler, Ejan M.</creator><creator>Markley, John L.</creator><creator>Cornilescu, Claudia C.</creator><general>Cold Spring Harbor Laboratory Press</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>C1K</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>200612</creationdate><title>Solution structure of a single‐domain thiosulfate sulfurtransferase from Arabidopsis thaliana</title><author>Cornilescu, Gabriel ; Vinarov, Dmitriy A. ; Tyler, Ejan M. ; Markley, John L. ; Cornilescu, Claudia C.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4576-28422862a2f50d3c49c51d21de84c1c2f531dfcb5ca060dcbab5b8f7aff4e0fd3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2006</creationdate><topic>Amino Acid Sequence</topic><topic>Arabidopsis - enzymology</topic><topic>Arabidopsis thaliana</topic><topic>At5g66040.1</topic><topic>Center for Eukaryotic Structural Genomics</topic><topic>CESG</topic><topic>Models, Molecular</topic><topic>Molecular Sequence Data</topic><topic>NMR</topic><topic>Nuclear Magnetic Resonance, Biomolecular - methods</topic><topic>Protein Structure Report</topic><topic>Protein Structure, Secondary</topic><topic>Protein Structure, Tertiary</topic><topic>rhodanese</topic><topic>Sequence Homology, Amino Acid</topic><topic>single‐domain sulfurtransferase</topic><topic>Solutions - analysis</topic><topic>Structural Homology, Protein</topic><topic>Thiosulfate Sulfurtransferase - chemistry</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Cornilescu, Gabriel</creatorcontrib><creatorcontrib>Vinarov, Dmitriy A.</creatorcontrib><creatorcontrib>Tyler, Ejan M.</creatorcontrib><creatorcontrib>Markley, John L.</creatorcontrib><creatorcontrib>Cornilescu, Claudia C.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Environmental Sciences and Pollution Management</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Protein science</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Cornilescu, Gabriel</au><au>Vinarov, Dmitriy A.</au><au>Tyler, Ejan M.</au><au>Markley, John L.</au><au>Cornilescu, Claudia C.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Solution structure of a single‐domain thiosulfate sulfurtransferase from Arabidopsis thaliana</atitle><jtitle>Protein science</jtitle><addtitle>Protein Sci</addtitle><date>2006-12</date><risdate>2006</risdate><volume>15</volume><issue>12</issue><spage>2836</spage><epage>2841</epage><pages>2836-2841</pages><issn>0961-8368</issn><eissn>1469-896X</eissn><abstract>We describe the three‐dimensional structure of the product of Arabidopsis thaliana gene At5g66040.1 as determined by NMR spectroscopy. This protein is categorized as single‐domain sulfurtransferase and is annotated as a senescence‐associated protein (sen1‐like protein) and ketoconazole resistance protein (http://arabidopsis.org/info/genefamily/STR_genefamily.html). The sequence of At5g66040.1 is virtually identical to that of a protein from Arabidopsis found by others to confer ketoconazole resistance in yeast. Comparison of the three‐dimensional structure with those in the Protein Data Bank revealed that At5g66040.1 contains an additional mobile β‐hairpin not found in other rhodaneses that may function in binding specific substrates. This represents the first structure of a single‐domain plant sulfurtransferase. The enzymatically active cysteine‐containing domain belongs to the CDC25 class of phosphatases, sulfide dehydrogenases, and stress proteins such as senescence specific protein 1 in plants, PspE and GlpE in bacteria, and cyanide and arsenate resistance proteins. Versions of this domain that lack the active site cysteine are found in other proteins, such as phosphatases, ubiquitin hydrolases, and sulfuryltransferases.</abstract><cop>Bristol</cop><pub>Cold Spring Harbor Laboratory Press</pub><pmid>17088324</pmid><doi>10.1110/ps.062395206</doi><tpages>6</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Amino Acid Sequence Arabidopsis - enzymology Arabidopsis thaliana At5g66040.1 Center for Eukaryotic Structural Genomics CESG Models, Molecular Molecular Sequence Data NMR Nuclear Magnetic Resonance, Biomolecular - methods Protein Structure Report Protein Structure, Secondary Protein Structure, Tertiary rhodanese Sequence Homology, Amino Acid single‐domain sulfurtransferase Solutions - analysis Structural Homology, Protein Thiosulfate Sulfurtransferase - chemistry |
title | Solution structure of a single‐domain thiosulfate sulfurtransferase from Arabidopsis thaliana |
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