Differential regulation of abundance and deadenylation of maternal transcripts during bovine oocyte maturation in vitro and in vivo
In bovine maturing oocytes and cleavage stage embryos, gene expression is mostly controlled at the post-transcriptional level, through degradation and deadenylation/polyadenylation. We have investigated how post transcriptional control of maternal transcripts was affected during in vitro and in vivo...
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creator | Thélie, Aurore Papillier, Pascal Pennetier, Sophie Perreau, Christine Traverso, Juan Martin Uzbekova, Svetlana Mermillod, Pascal Joly, Catherine Humblot, Patrice Dalbiès-Tran, Rozenn |
description | In bovine maturing oocytes and cleavage stage embryos, gene expression is mostly controlled at the post-transcriptional level, through degradation and deadenylation/polyadenylation. We have investigated how post transcriptional control of maternal transcripts was affected during in vitro and in vivo maturation, as a model of differential developmental competence.
Using real time PCR, we have analyzed variation of maternal transcripts, in terms of abundance and polyadenylation, during in vitro or in vivo oocyte maturation and in vitro embryo development. Four genes are characterized here for the first time in bovine: ring finger protein 18 (RNF18) and breast cancer anti-estrogen resistance 4 (BCAR4), whose oocyte preferential expression was not previously reported in any species, as well as Maternal embryonic leucine zipper kinase (MELK) and STELLA. We included three known oocyte marker genes (Maternal antigen that embryos require (MATER), Zygote arrest 1 (ZAR1), NACHT, leucine rich repeat and PYD containing 9 (NALP9)). In addition, we selected transcripts previously identified as differentially regulated during maturation, peroxiredoxin 1 and 2 (PRDX1, PRDX2), inhibitor of DNA binding 2 and 3 (ID2, ID3), cyclin B1 (CCNB1), cell division cycle 2 (CDC2), as well as Aurora A (AURKA). Most transcripts underwent a moderate degradation during maturation. But they displayed sharply contrasted deadenylation patterns that account for variations observed previously by DNA array and correlated with the presence of a putative cytoplasmic polyadenylation element in their 3' untranslated region. Similar variations in abundance and polyadenylation status were observed during in vitro maturation or in vivo maturation, except for PRDX1, that appears as a marker of in vivo maturation. Throughout in vitro development, oocyte restricted transcripts were progressively degraded until the morula stage, except for MELK ; and the corresponding genes remained silent after major embryonic genome activation.
Altogether, our data emphasize the extent of post-transcriptional regulation during oocyte maturation. They do not evidence a general alteration of this phenomenon after in vitro maturation as compared to in vivo maturation, but indicate that some individual messenger RNA can be affected. |
doi_str_mv | 10.1186/1471-213x-7-125 |
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Using real time PCR, we have analyzed variation of maternal transcripts, in terms of abundance and polyadenylation, during in vitro or in vivo oocyte maturation and in vitro embryo development. Four genes are characterized here for the first time in bovine: ring finger protein 18 (RNF18) and breast cancer anti-estrogen resistance 4 (BCAR4), whose oocyte preferential expression was not previously reported in any species, as well as Maternal embryonic leucine zipper kinase (MELK) and STELLA. We included three known oocyte marker genes (Maternal antigen that embryos require (MATER), Zygote arrest 1 (ZAR1), NACHT, leucine rich repeat and PYD containing 9 (NALP9)). In addition, we selected transcripts previously identified as differentially regulated during maturation, peroxiredoxin 1 and 2 (PRDX1, PRDX2), inhibitor of DNA binding 2 and 3 (ID2, ID3), cyclin B1 (CCNB1), cell division cycle 2 (CDC2), as well as Aurora A (AURKA). Most transcripts underwent a moderate degradation during maturation. But they displayed sharply contrasted deadenylation patterns that account for variations observed previously by DNA array and correlated with the presence of a putative cytoplasmic polyadenylation element in their 3' untranslated region. Similar variations in abundance and polyadenylation status were observed during in vitro maturation or in vivo maturation, except for PRDX1, that appears as a marker of in vivo maturation. Throughout in vitro development, oocyte restricted transcripts were progressively degraded until the morula stage, except for MELK ; and the corresponding genes remained silent after major embryonic genome activation.
Altogether, our data emphasize the extent of post-transcriptional regulation during oocyte maturation. They do not evidence a general alteration of this phenomenon after in vitro maturation as compared to in vivo maturation, but indicate that some individual messenger RNA can be affected.</description><identifier>ISSN: 1471-213X</identifier><identifier>EISSN: 1471-213X</identifier><identifier>DOI: 10.1186/1471-213x-7-125</identifier><identifier>PMID: 17988387</identifier><language>eng</language><publisher>England: BioMed Central Ltd</publisher><subject>Animals ; Blotting, Northern ; Cattle - embryology ; Cattle - genetics ; Development Biology ; Embryonic Development - genetics ; Female ; Gene expression ; Gene Expression Profiling ; Gene Expression Regulation, Developmental ; Genetic aspects ; Health aspects ; Life Sciences ; Oligonucleotide Array Sequence Analysis ; Oocytes ; Oocytes - growth & development ; Oocytes - metabolism ; Polyadenylation ; Polymerase chain reaction ; Reverse Transcriptase Polymerase Chain Reaction ; RNA Stability ; Transcription, Genetic</subject><ispartof>BMC developmental biology, 2007-11, Vol.7 (1), p.125-125, Article 125</ispartof><rights>COPYRIGHT 2007 BioMed Central Ltd.</rights><rights>Distributed under a Creative Commons Attribution 4.0 International License</rights><rights>Copyright © 2007 Thélie et al; licensee BioMed Central Ltd. 2007 Thélie et al; licensee BioMed Central Ltd.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-b682t-475502dc42951f38809cdf78be5719bb2097442ee5be00efaebf1d1967bc73033</citedby><cites>FETCH-LOGICAL-b682t-475502dc42951f38809cdf78be5719bb2097442ee5be00efaebf1d1967bc73033</cites><orcidid>0000-0002-6989-6904 ; 0000-0002-0396-2067 ; 0000-0002-9836-2506</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2211488/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2211488/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,24780,27901,27902,53766,53768,75481,75482</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/17988387$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://hal.inrae.fr/hal-02656914$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Thélie, Aurore</creatorcontrib><creatorcontrib>Papillier, Pascal</creatorcontrib><creatorcontrib>Pennetier, Sophie</creatorcontrib><creatorcontrib>Perreau, Christine</creatorcontrib><creatorcontrib>Traverso, Juan Martin</creatorcontrib><creatorcontrib>Uzbekova, Svetlana</creatorcontrib><creatorcontrib>Mermillod, Pascal</creatorcontrib><creatorcontrib>Joly, Catherine</creatorcontrib><creatorcontrib>Humblot, Patrice</creatorcontrib><creatorcontrib>Dalbiès-Tran, Rozenn</creatorcontrib><title>Differential regulation of abundance and deadenylation of maternal transcripts during bovine oocyte maturation in vitro and in vivo</title><title>BMC developmental biology</title><addtitle>BMC Dev Biol</addtitle><description>In bovine maturing oocytes and cleavage stage embryos, gene expression is mostly controlled at the post-transcriptional level, through degradation and deadenylation/polyadenylation. We have investigated how post transcriptional control of maternal transcripts was affected during in vitro and in vivo maturation, as a model of differential developmental competence.
Using real time PCR, we have analyzed variation of maternal transcripts, in terms of abundance and polyadenylation, during in vitro or in vivo oocyte maturation and in vitro embryo development. Four genes are characterized here for the first time in bovine: ring finger protein 18 (RNF18) and breast cancer anti-estrogen resistance 4 (BCAR4), whose oocyte preferential expression was not previously reported in any species, as well as Maternal embryonic leucine zipper kinase (MELK) and STELLA. We included three known oocyte marker genes (Maternal antigen that embryos require (MATER), Zygote arrest 1 (ZAR1), NACHT, leucine rich repeat and PYD containing 9 (NALP9)). In addition, we selected transcripts previously identified as differentially regulated during maturation, peroxiredoxin 1 and 2 (PRDX1, PRDX2), inhibitor of DNA binding 2 and 3 (ID2, ID3), cyclin B1 (CCNB1), cell division cycle 2 (CDC2), as well as Aurora A (AURKA). Most transcripts underwent a moderate degradation during maturation. But they displayed sharply contrasted deadenylation patterns that account for variations observed previously by DNA array and correlated with the presence of a putative cytoplasmic polyadenylation element in their 3' untranslated region. Similar variations in abundance and polyadenylation status were observed during in vitro maturation or in vivo maturation, except for PRDX1, that appears as a marker of in vivo maturation. Throughout in vitro development, oocyte restricted transcripts were progressively degraded until the morula stage, except for MELK ; and the corresponding genes remained silent after major embryonic genome activation.
Altogether, our data emphasize the extent of post-transcriptional regulation during oocyte maturation. They do not evidence a general alteration of this phenomenon after in vitro maturation as compared to in vivo maturation, but indicate that some individual messenger RNA can be affected.</description><subject>Animals</subject><subject>Blotting, Northern</subject><subject>Cattle - embryology</subject><subject>Cattle - genetics</subject><subject>Development Biology</subject><subject>Embryonic Development - genetics</subject><subject>Female</subject><subject>Gene expression</subject><subject>Gene Expression Profiling</subject><subject>Gene Expression Regulation, Developmental</subject><subject>Genetic aspects</subject><subject>Health aspects</subject><subject>Life Sciences</subject><subject>Oligonucleotide Array Sequence Analysis</subject><subject>Oocytes</subject><subject>Oocytes - growth & development</subject><subject>Oocytes - metabolism</subject><subject>Polyadenylation</subject><subject>Polymerase chain reaction</subject><subject>Reverse Transcriptase Polymerase Chain Reaction</subject><subject>RNA Stability</subject><subject>Transcription, Genetic</subject><issn>1471-213X</issn><issn>1471-213X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2007</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkstv1DAQhyMEomXhzA1FQkLqIa0fSZxckJbyaKWVkHhI3CzbGW-NEnuxnVX3zD-O0yy0i4qQD7Znvt-MPTNZ9hyjU4yb-gyXDBcE0-uCFZhUD7Lj35ZvD--cj7InIXxHCLMG14-zI8zapqENO85-vjVagwcbjehzD-uxF9E4mzudCznaTlgFubBd3oHowO5u3YOI4G1SRS9sUN5sYsi70Ru7zqXbGgu5c2oXYSJHP-uMzbcmencT8uaydU-zR1r0AZ7t90X29f27L-cXxerjh8vz5aqQdUNiUbKqQqRTJWkrrGnToFZ1mjUSKoZbKQlqWVkSgEoCQqAFSI073NZMKkYRpYvs9Rx3M8oBOpU-7UXPN94Mwu-4E4Yfeqy54mu35YRgXKaCLbKTOcDVX7KL5YpPNkTqqm5xucWJfTOz0rh_JDv0KDfwqWF8ahhnPLUzBXm1f7F3P0YIkQ8mKOh7YcGNgTOE6opi-l-QIFrWTYkS-HIG16IHbqx2KbmaYL7EjNY1wqhM1Ok9VFodDEY5C9ok-4Hg5ECQmAjXcS3GEPjl50-H7NnMKu9C8KD_FAUjPk31PWV4cbdxt_x-jOkvPG_z7w</recordid><startdate>20071107</startdate><enddate>20071107</enddate><creator>Thélie, Aurore</creator><creator>Papillier, Pascal</creator><creator>Pennetier, Sophie</creator><creator>Perreau, Christine</creator><creator>Traverso, Juan Martin</creator><creator>Uzbekova, Svetlana</creator><creator>Mermillod, Pascal</creator><creator>Joly, Catherine</creator><creator>Humblot, Patrice</creator><creator>Dalbiès-Tran, Rozenn</creator><general>BioMed Central Ltd</general><general>BioMed Central</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>ISR</scope><scope>7TM</scope><scope>7X8</scope><scope>1XC</scope><scope>VOOES</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0002-6989-6904</orcidid><orcidid>https://orcid.org/0000-0002-0396-2067</orcidid><orcidid>https://orcid.org/0000-0002-9836-2506</orcidid></search><sort><creationdate>20071107</creationdate><title>Differential regulation of abundance and deadenylation of maternal transcripts during bovine oocyte maturation in vitro and in vivo</title><author>Thélie, Aurore ; Papillier, Pascal ; Pennetier, Sophie ; Perreau, Christine ; Traverso, Juan Martin ; Uzbekova, Svetlana ; Mermillod, Pascal ; Joly, Catherine ; Humblot, Patrice ; Dalbiès-Tran, Rozenn</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-b682t-475502dc42951f38809cdf78be5719bb2097442ee5be00efaebf1d1967bc73033</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2007</creationdate><topic>Animals</topic><topic>Blotting, Northern</topic><topic>Cattle - embryology</topic><topic>Cattle - genetics</topic><topic>Development Biology</topic><topic>Embryonic Development - genetics</topic><topic>Female</topic><topic>Gene expression</topic><topic>Gene Expression Profiling</topic><topic>Gene Expression Regulation, Developmental</topic><topic>Genetic aspects</topic><topic>Health aspects</topic><topic>Life Sciences</topic><topic>Oligonucleotide Array Sequence Analysis</topic><topic>Oocytes</topic><topic>Oocytes - growth & development</topic><topic>Oocytes - metabolism</topic><topic>Polyadenylation</topic><topic>Polymerase chain reaction</topic><topic>Reverse Transcriptase Polymerase Chain Reaction</topic><topic>RNA Stability</topic><topic>Transcription, Genetic</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Thélie, Aurore</creatorcontrib><creatorcontrib>Papillier, Pascal</creatorcontrib><creatorcontrib>Pennetier, Sophie</creatorcontrib><creatorcontrib>Perreau, Christine</creatorcontrib><creatorcontrib>Traverso, Juan Martin</creatorcontrib><creatorcontrib>Uzbekova, Svetlana</creatorcontrib><creatorcontrib>Mermillod, Pascal</creatorcontrib><creatorcontrib>Joly, Catherine</creatorcontrib><creatorcontrib>Humblot, Patrice</creatorcontrib><creatorcontrib>Dalbiès-Tran, Rozenn</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Gale In Context: Science</collection><collection>Nucleic Acids Abstracts</collection><collection>MEDLINE - Academic</collection><collection>Hyper Article en Ligne (HAL)</collection><collection>Hyper Article en Ligne (HAL) (Open Access)</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>BMC developmental biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Thélie, Aurore</au><au>Papillier, Pascal</au><au>Pennetier, Sophie</au><au>Perreau, Christine</au><au>Traverso, Juan Martin</au><au>Uzbekova, Svetlana</au><au>Mermillod, Pascal</au><au>Joly, Catherine</au><au>Humblot, Patrice</au><au>Dalbiès-Tran, Rozenn</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Differential regulation of abundance and deadenylation of maternal transcripts during bovine oocyte maturation in vitro and in vivo</atitle><jtitle>BMC developmental biology</jtitle><addtitle>BMC Dev Biol</addtitle><date>2007-11-07</date><risdate>2007</risdate><volume>7</volume><issue>1</issue><spage>125</spage><epage>125</epage><pages>125-125</pages><artnum>125</artnum><issn>1471-213X</issn><eissn>1471-213X</eissn><abstract>In bovine maturing oocytes and cleavage stage embryos, gene expression is mostly controlled at the post-transcriptional level, through degradation and deadenylation/polyadenylation. We have investigated how post transcriptional control of maternal transcripts was affected during in vitro and in vivo maturation, as a model of differential developmental competence.
Using real time PCR, we have analyzed variation of maternal transcripts, in terms of abundance and polyadenylation, during in vitro or in vivo oocyte maturation and in vitro embryo development. Four genes are characterized here for the first time in bovine: ring finger protein 18 (RNF18) and breast cancer anti-estrogen resistance 4 (BCAR4), whose oocyte preferential expression was not previously reported in any species, as well as Maternal embryonic leucine zipper kinase (MELK) and STELLA. We included three known oocyte marker genes (Maternal antigen that embryos require (MATER), Zygote arrest 1 (ZAR1), NACHT, leucine rich repeat and PYD containing 9 (NALP9)). In addition, we selected transcripts previously identified as differentially regulated during maturation, peroxiredoxin 1 and 2 (PRDX1, PRDX2), inhibitor of DNA binding 2 and 3 (ID2, ID3), cyclin B1 (CCNB1), cell division cycle 2 (CDC2), as well as Aurora A (AURKA). Most transcripts underwent a moderate degradation during maturation. But they displayed sharply contrasted deadenylation patterns that account for variations observed previously by DNA array and correlated with the presence of a putative cytoplasmic polyadenylation element in their 3' untranslated region. Similar variations in abundance and polyadenylation status were observed during in vitro maturation or in vivo maturation, except for PRDX1, that appears as a marker of in vivo maturation. Throughout in vitro development, oocyte restricted transcripts were progressively degraded until the morula stage, except for MELK ; and the corresponding genes remained silent after major embryonic genome activation.
Altogether, our data emphasize the extent of post-transcriptional regulation during oocyte maturation. They do not evidence a general alteration of this phenomenon after in vitro maturation as compared to in vivo maturation, but indicate that some individual messenger RNA can be affected.</abstract><cop>England</cop><pub>BioMed Central Ltd</pub><pmid>17988387</pmid><doi>10.1186/1471-213x-7-125</doi><tpages>1</tpages><orcidid>https://orcid.org/0000-0002-6989-6904</orcidid><orcidid>https://orcid.org/0000-0002-0396-2067</orcidid><orcidid>https://orcid.org/0000-0002-9836-2506</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Animals Blotting, Northern Cattle - embryology Cattle - genetics Development Biology Embryonic Development - genetics Female Gene expression Gene Expression Profiling Gene Expression Regulation, Developmental Genetic aspects Health aspects Life Sciences Oligonucleotide Array Sequence Analysis Oocytes Oocytes - growth & development Oocytes - metabolism Polyadenylation Polymerase chain reaction Reverse Transcriptase Polymerase Chain Reaction RNA Stability Transcription, Genetic |
title | Differential regulation of abundance and deadenylation of maternal transcripts during bovine oocyte maturation in vitro and in vivo |
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