C to U editing at position 32 of the anticodon loop precedes tRNA 5' leader removal in trypanosomatids
In all organisms, precursor tRNAs are processed into mature functional units by post-transcriptional changes. These involve 5′ and 3′ end trimming as well as the addition of a significant number of chemical modifications, including RNA editing. The only known example of non-organellar C to U editing...
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creator | Gaston, Kirk W Rubio, Mary Anne T Spears, Jessica L Pastar, Irena Papavasiliou, F. Nina Alfonzo, Juan D |
description | In all organisms, precursor tRNAs are processed into mature functional units by post-transcriptional changes. These involve 5′ and 3′ end trimming as well as the addition of a significant number of chemical modifications, including RNA editing. The only known example of non-organellar C to U editing of tRNAs occurs in trypanosomatids. In this system, editing at position 32 of the anticodon loop of tRNAThr(AGU) stimulates, but is not required for, the subsequent formation of inosine at position 34. In the present work, we expand the number of C to U edited tRNAs to include all the threonyl tRNA isoacceptors. Notably, the absence of a naturally encoded adenosine, at position 34, in two of these isoacceptors demonstrates that A to I is not required for C to U editing. We also show that C to U editing is a nuclear event while A to I is cytoplasmic, where C to U editing at position 32 occurs in the precursor tRNA prior to 5′ leader removal. Our data supports the view that C to U editing is more widespread than previously thought and is part of a stepwise process in the maturation of tRNAs in these organisms. |
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We also show that C to U editing is a nuclear event while A to I is cytoplasmic, where C to U editing at position 32 occurs in the precursor tRNA prior to 5′ leader removal. 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Nina</creatorcontrib><creatorcontrib>Alfonzo, Juan D</creatorcontrib><title>C to U editing at position 32 of the anticodon loop precedes tRNA 5' leader removal in trypanosomatids</title><title>Nucleic acids research</title><addtitle>Nucleic Acids Res</addtitle><description>In all organisms, precursor tRNAs are processed into mature functional units by post-transcriptional changes. These involve 5′ and 3′ end trimming as well as the addition of a significant number of chemical modifications, including RNA editing. The only known example of non-organellar C to U editing of tRNAs occurs in trypanosomatids. In this system, editing at position 32 of the anticodon loop of tRNAThr(AGU) stimulates, but is not required for, the subsequent formation of inosine at position 34. In the present work, we expand the number of C to U edited tRNAs to include all the threonyl tRNA isoacceptors. Notably, the absence of a naturally encoded adenosine, at position 34, in two of these isoacceptors demonstrates that A to I is not required for C to U editing. We also show that C to U editing is a nuclear event while A to I is cytoplasmic, where C to U editing at position 32 occurs in the precursor tRNA prior to 5′ leader removal. Our data supports the view that C to U editing is more widespread than previously thought and is part of a stepwise process in the maturation of tRNAs in these organisms.</description><subject>Animals</subject><subject>Base Sequence</subject><subject>Molecular Sequence Data</subject><subject>Nucleic Acid Conformation</subject><subject>RNA</subject><subject>RNA Editing</subject><subject>RNA Processing, Post-Transcriptional</subject><subject>RNA, Transfer, Amino Acyl - chemistry</subject><subject>RNA, Transfer, Amino Acyl - genetics</subject><subject>RNA, Transfer, Amino Acyl - metabolism</subject><subject>Trypanosoma brucei brucei - genetics</subject><subject>Trypanosoma brucei brucei - metabolism</subject><issn>0305-1048</issn><issn>1362-4962</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2007</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqF0V1rFDEUBuAgil2rN_4ADQUVhLH5mszkRiirdoVSwbpQvAmZyZlt2pnJmGSL_femzNKqF3qVQ_JwOCcvQs8peUeJ4oejCYebq6ES5QO0oFyyQijJHqIF4aQsKBH1HnoS4yUhVNBSPEZ7tFJUlpVcoG6Jk8drDNYlN26wSXjyMdd-xJxh3-F0AdiMybXe5rve-wlPAVqwEHH6enqEyze4B2Mh4ACDvzY9diNO4WYyo49-MMnZ-BQ96kwf4dnu3EfrTx-_LVfFyZfjz8ujk6ItmUwFV41sGK8bKEFY1gjVSsFa1diuyePmmtesNAKIEAoUsYyKpjZMcU5ASMv30fu577RtBrAtjCmYXk_BDSbcaG-c_vNldBd64681o1XJKc0NXu8aBP9jCzHpwcUW-t6M4LdRS0WIoqz-L2SEV5JVIsODv-Cl34Yx_0I2RFIhOMvo7Yza4GMM0N2NTIm-DVnnkPUccsYvfl_ynu5SzeDVDPx2-nejYnYuJvh5J0240rLiValX59_1h7PzFalOib5d5eXsO-O12QQX9fqMEcoJqbmQlPNfDdLHSg</recordid><startdate>20071101</startdate><enddate>20071101</enddate><creator>Gaston, Kirk W</creator><creator>Rubio, Mary Anne T</creator><creator>Spears, Jessica L</creator><creator>Pastar, Irena</creator><creator>Papavasiliou, F. Nina</creator><creator>Alfonzo, Juan D</creator><general>Oxford University Press</general><general>Oxford Publishing Limited (England)</general><scope>FBQ</scope><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7QO</scope><scope>7QP</scope><scope>7QR</scope><scope>7SS</scope><scope>7TK</scope><scope>7TM</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>K9.</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20071101</creationdate><title>C to U editing at position 32 of the anticodon loop precedes tRNA 5' leader removal in trypanosomatids</title><author>Gaston, Kirk W ; Rubio, Mary Anne T ; Spears, Jessica L ; Pastar, Irena ; Papavasiliou, F. 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subjects | Animals Base Sequence Molecular Sequence Data Nucleic Acid Conformation RNA RNA Editing RNA Processing, Post-Transcriptional RNA, Transfer, Amino Acyl - chemistry RNA, Transfer, Amino Acyl - genetics RNA, Transfer, Amino Acyl - metabolism Trypanosoma brucei brucei - genetics Trypanosoma brucei brucei - metabolism |
title | C to U editing at position 32 of the anticodon loop precedes tRNA 5' leader removal in trypanosomatids |
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