C to U editing at position 32 of the anticodon loop precedes tRNA 5' leader removal in trypanosomatids

In all organisms, precursor tRNAs are processed into mature functional units by post-transcriptional changes. These involve 5′ and 3′ end trimming as well as the addition of a significant number of chemical modifications, including RNA editing. The only known example of non-organellar C to U editing...

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Veröffentlicht in:Nucleic acids research 2007-11, Vol.35 (20), p.6740-6749
Hauptverfasser: Gaston, Kirk W, Rubio, Mary Anne T, Spears, Jessica L, Pastar, Irena, Papavasiliou, F. Nina, Alfonzo, Juan D
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container_end_page 6749
container_issue 20
container_start_page 6740
container_title Nucleic acids research
container_volume 35
creator Gaston, Kirk W
Rubio, Mary Anne T
Spears, Jessica L
Pastar, Irena
Papavasiliou, F. Nina
Alfonzo, Juan D
description In all organisms, precursor tRNAs are processed into mature functional units by post-transcriptional changes. These involve 5′ and 3′ end trimming as well as the addition of a significant number of chemical modifications, including RNA editing. The only known example of non-organellar C to U editing of tRNAs occurs in trypanosomatids. In this system, editing at position 32 of the anticodon loop of tRNAThr(AGU) stimulates, but is not required for, the subsequent formation of inosine at position 34. In the present work, we expand the number of C to U edited tRNAs to include all the threonyl tRNA isoacceptors. Notably, the absence of a naturally encoded adenosine, at position 34, in two of these isoacceptors demonstrates that A to I is not required for C to U editing. We also show that C to U editing is a nuclear event while A to I is cytoplasmic, where C to U editing at position 32 occurs in the precursor tRNA prior to 5′ leader removal. Our data supports the view that C to U editing is more widespread than previously thought and is part of a stepwise process in the maturation of tRNAs in these organisms.
doi_str_mv 10.1093/nar/gkm745
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subjects Animals
Base Sequence
Molecular Sequence Data
Nucleic Acid Conformation
RNA
RNA Editing
RNA Processing, Post-Transcriptional
RNA, Transfer, Amino Acyl - chemistry
RNA, Transfer, Amino Acyl - genetics
RNA, Transfer, Amino Acyl - metabolism
Trypanosoma brucei brucei - genetics
Trypanosoma brucei brucei - metabolism
title C to U editing at position 32 of the anticodon loop precedes tRNA 5' leader removal in trypanosomatids
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