Expression and characterization of six mutations in the protoporphyrinogen oxidase gene among Finnish variegate porphyria patients
Variegate porphyria (VP) is an inherited disorder of heme biosynthesis that results from a partial deficiency of protoporphyrinogen oxidase (PPOX). Patients with VP may experience acute neurovisceral attacks and cutaneous photosensitivity. To date we have characterized 109 VP patients representing 1...
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Veröffentlicht in: | Molecular medicine (Cambridge, Mass.) Mass.), 2001-05, Vol.7 (5), p.320-328 |
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description | Variegate porphyria (VP) is an inherited disorder of heme biosynthesis that results from a partial deficiency of protoporphyrinogen oxidase (PPOX). Patients with VP may experience acute neurovisceral attacks and cutaneous photosensitivity. To date we have characterized 109 VP patients representing 19 VP families in the Finnish population of 5 million, both biochemically and clinically.
Mutations were identified by direct sequencing of the patients' genomic DNA. The effect of the mutations was determined by sequencing the reverse transcriptase polymerase chain reaction (RT-PCR) product amplified from total RNA extracted from the patients' lymphoblast cell lines and expressing the mutations in E. coli and COS-1 cells.
Of the six mutations identified in the PPOX gene, three mutations (IVS2-2a-->c, 338G-->C, and 470A-->4C) caused splicing defects, one produced a frameshift (78insC) and two mutations (R152C and L401F) caused amino acid substitutions. In RT-PCR, the IVS2-2a-->c mutation caused a retention of a 36-bp fragment in the 3' end of intron 2, the 338G-->C mutation caused an exon 4 deletion, and the 470A-->C mutation caused an exon 5 deletion with retention of a 19-bp fragment of the 3' end of intron 5. In both prokaryotic and eukaryotic expression systems, the PPOX activities of five mutants were decreased to 0-5% of the normal activity.
This study describes five novel mutations and one earlier described major mutation among Finnish VP patients. All mutations produced detectable transcripts, but resulted in decreased PPOX activity confirming the causality of the mutations and the biochemical defects in these patients. |
doi_str_mv | 10.1007/bf03402215 |
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Mutations were identified by direct sequencing of the patients' genomic DNA. The effect of the mutations was determined by sequencing the reverse transcriptase polymerase chain reaction (RT-PCR) product amplified from total RNA extracted from the patients' lymphoblast cell lines and expressing the mutations in E. coli and COS-1 cells.
Of the six mutations identified in the PPOX gene, three mutations (IVS2-2a-->c, 338G-->C, and 470A-->4C) caused splicing defects, one produced a frameshift (78insC) and two mutations (R152C and L401F) caused amino acid substitutions. In RT-PCR, the IVS2-2a-->c mutation caused a retention of a 36-bp fragment in the 3' end of intron 2, the 338G-->C mutation caused an exon 4 deletion, and the 470A-->C mutation caused an exon 5 deletion with retention of a 19-bp fragment of the 3' end of intron 5. In both prokaryotic and eukaryotic expression systems, the PPOX activities of five mutants were decreased to 0-5% of the normal activity.
This study describes five novel mutations and one earlier described major mutation among Finnish VP patients. All mutations produced detectable transcripts, but resulted in decreased PPOX activity confirming the causality of the mutations and the biochemical defects in these patients.</description><identifier>ISSN: 1076-1551</identifier><identifier>EISSN: 1528-3658</identifier><identifier>DOI: 10.1007/bf03402215</identifier><identifier>PMID: 11474578</identifier><language>eng</language><publisher>England</publisher><subject>Animals ; COS Cells ; DNA Mutational Analysis ; Escherichia coli ; Escherichia coli Proteins ; Exons ; Female ; Finland ; Flavoproteins ; Frameshift Mutation ; Genetic Carrier Screening ; Heterozygote ; Humans ; Male ; Mitochondrial Proteins ; Mutation ; Mutation, Missense ; Oxidoreductases - deficiency ; Oxidoreductases - genetics ; Oxidoreductases Acting on CH-CH Group Donors ; Pedigree ; Point Mutation ; Porphyrias, Hepatic - diagnosis ; Porphyrias, Hepatic - genetics ; Protoporphyrinogen Oxidase ; Restriction Mapping ; Reverse Transcriptase Polymerase Chain Reaction ; Sequence Analysis, DNA ; Transcription, Genetic</subject><ispartof>Molecular medicine (Cambridge, Mass.), 2001-05, Vol.7 (5), p.320-328</ispartof><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c374t-49495daf79e4a4276f128265c255ed0945b4e2ab5837d6793b5e7400db0d44313</citedby><cites>FETCH-LOGICAL-c374t-49495daf79e4a4276f128265c255ed0945b4e2ab5837d6793b5e7400db0d44313</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC1950037/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC1950037/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,727,780,784,864,885,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/11474578$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>von und zu Fraunberg, M</creatorcontrib><creatorcontrib>Tenhunen, R</creatorcontrib><creatorcontrib>Kauppinen, R</creatorcontrib><title>Expression and characterization of six mutations in the protoporphyrinogen oxidase gene among Finnish variegate porphyria patients</title><title>Molecular medicine (Cambridge, Mass.)</title><addtitle>Mol Med</addtitle><description>Variegate porphyria (VP) is an inherited disorder of heme biosynthesis that results from a partial deficiency of protoporphyrinogen oxidase (PPOX). Patients with VP may experience acute neurovisceral attacks and cutaneous photosensitivity. To date we have characterized 109 VP patients representing 19 VP families in the Finnish population of 5 million, both biochemically and clinically.
Mutations were identified by direct sequencing of the patients' genomic DNA. The effect of the mutations was determined by sequencing the reverse transcriptase polymerase chain reaction (RT-PCR) product amplified from total RNA extracted from the patients' lymphoblast cell lines and expressing the mutations in E. coli and COS-1 cells.
Of the six mutations identified in the PPOX gene, three mutations (IVS2-2a-->c, 338G-->C, and 470A-->4C) caused splicing defects, one produced a frameshift (78insC) and two mutations (R152C and L401F) caused amino acid substitutions. In RT-PCR, the IVS2-2a-->c mutation caused a retention of a 36-bp fragment in the 3' end of intron 2, the 338G-->C mutation caused an exon 4 deletion, and the 470A-->C mutation caused an exon 5 deletion with retention of a 19-bp fragment of the 3' end of intron 5. In both prokaryotic and eukaryotic expression systems, the PPOX activities of five mutants were decreased to 0-5% of the normal activity.
This study describes five novel mutations and one earlier described major mutation among Finnish VP patients. All mutations produced detectable transcripts, but resulted in decreased PPOX activity confirming the causality of the mutations and the biochemical defects in these patients.</description><subject>Animals</subject><subject>COS Cells</subject><subject>DNA Mutational Analysis</subject><subject>Escherichia coli</subject><subject>Escherichia coli Proteins</subject><subject>Exons</subject><subject>Female</subject><subject>Finland</subject><subject>Flavoproteins</subject><subject>Frameshift Mutation</subject><subject>Genetic Carrier Screening</subject><subject>Heterozygote</subject><subject>Humans</subject><subject>Male</subject><subject>Mitochondrial Proteins</subject><subject>Mutation</subject><subject>Mutation, Missense</subject><subject>Oxidoreductases - deficiency</subject><subject>Oxidoreductases - genetics</subject><subject>Oxidoreductases Acting on CH-CH Group Donors</subject><subject>Pedigree</subject><subject>Point Mutation</subject><subject>Porphyrias, Hepatic - diagnosis</subject><subject>Porphyrias, Hepatic - genetics</subject><subject>Protoporphyrinogen Oxidase</subject><subject>Restriction Mapping</subject><subject>Reverse Transcriptase Polymerase Chain Reaction</subject><subject>Sequence Analysis, DNA</subject><subject>Transcription, Genetic</subject><issn>1076-1551</issn><issn>1528-3658</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2001</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpVkU1P3DAQhq2KCihw6Q9APnGolNaO7Ti5VCqIbZGQeoGzNUkmG6ONndre1dIjvxwDC6Wn-XrmnZFeQj5z9pUzpr-1AxOSlSVXH8ghV2VdiErVezlnuiq4UvyAfIrxjrGMSLVPDjiXWipdH5KHy-0cMEbrHQXX026EAF3CYP9Cemr6gUa7pdM6PdeRWkfTiHQOPvnZh3m8D9b5JWZ0a3uISHOOFCbvlnRhnbNxpBsIFpeQ8t5uBeicBdGleEw-DrCKeLKLR-R2cXlz8au4_v3z6uLHddEJLVMhG9moHgbdoARZ6mrgZV1WqiuVwp41UrUSS2hVLXRf6Ua0CrVkrG9ZL6Xg4oh8f9Gd1-2EfZdvB1iZOdgJwr3xYM3_E2dHs_QbwxvFmNBZ4GwnEPyfNcZkJhs7XK3AoV9Ho3mmeFVn8MsL2AUfY8Dh7Qhn5skyc754tSzDp-_f-ofuPBKPGzSVUw</recordid><startdate>20010501</startdate><enddate>20010501</enddate><creator>von und zu Fraunberg, M</creator><creator>Tenhunen, R</creator><creator>Kauppinen, R</creator><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20010501</creationdate><title>Expression and characterization of six mutations in the protoporphyrinogen oxidase gene among Finnish variegate porphyria patients</title><author>von und zu Fraunberg, M ; Tenhunen, R ; Kauppinen, R</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c374t-49495daf79e4a4276f128265c255ed0945b4e2ab5837d6793b5e7400db0d44313</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2001</creationdate><topic>Animals</topic><topic>COS Cells</topic><topic>DNA Mutational Analysis</topic><topic>Escherichia coli</topic><topic>Escherichia coli Proteins</topic><topic>Exons</topic><topic>Female</topic><topic>Finland</topic><topic>Flavoproteins</topic><topic>Frameshift Mutation</topic><topic>Genetic Carrier Screening</topic><topic>Heterozygote</topic><topic>Humans</topic><topic>Male</topic><topic>Mitochondrial Proteins</topic><topic>Mutation</topic><topic>Mutation, Missense</topic><topic>Oxidoreductases - deficiency</topic><topic>Oxidoreductases - genetics</topic><topic>Oxidoreductases Acting on CH-CH Group Donors</topic><topic>Pedigree</topic><topic>Point Mutation</topic><topic>Porphyrias, Hepatic - diagnosis</topic><topic>Porphyrias, Hepatic - genetics</topic><topic>Protoporphyrinogen Oxidase</topic><topic>Restriction Mapping</topic><topic>Reverse Transcriptase Polymerase Chain Reaction</topic><topic>Sequence Analysis, DNA</topic><topic>Transcription, Genetic</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>von und zu Fraunberg, M</creatorcontrib><creatorcontrib>Tenhunen, R</creatorcontrib><creatorcontrib>Kauppinen, R</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Molecular medicine (Cambridge, Mass.)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>von und zu Fraunberg, M</au><au>Tenhunen, R</au><au>Kauppinen, R</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Expression and characterization of six mutations in the protoporphyrinogen oxidase gene among Finnish variegate porphyria patients</atitle><jtitle>Molecular medicine (Cambridge, Mass.)</jtitle><addtitle>Mol Med</addtitle><date>2001-05-01</date><risdate>2001</risdate><volume>7</volume><issue>5</issue><spage>320</spage><epage>328</epage><pages>320-328</pages><issn>1076-1551</issn><eissn>1528-3658</eissn><abstract>Variegate porphyria (VP) is an inherited disorder of heme biosynthesis that results from a partial deficiency of protoporphyrinogen oxidase (PPOX). Patients with VP may experience acute neurovisceral attacks and cutaneous photosensitivity. To date we have characterized 109 VP patients representing 19 VP families in the Finnish population of 5 million, both biochemically and clinically.
Mutations were identified by direct sequencing of the patients' genomic DNA. The effect of the mutations was determined by sequencing the reverse transcriptase polymerase chain reaction (RT-PCR) product amplified from total RNA extracted from the patients' lymphoblast cell lines and expressing the mutations in E. coli and COS-1 cells.
Of the six mutations identified in the PPOX gene, three mutations (IVS2-2a-->c, 338G-->C, and 470A-->4C) caused splicing defects, one produced a frameshift (78insC) and two mutations (R152C and L401F) caused amino acid substitutions. In RT-PCR, the IVS2-2a-->c mutation caused a retention of a 36-bp fragment in the 3' end of intron 2, the 338G-->C mutation caused an exon 4 deletion, and the 470A-->C mutation caused an exon 5 deletion with retention of a 19-bp fragment of the 3' end of intron 5. In both prokaryotic and eukaryotic expression systems, the PPOX activities of five mutants were decreased to 0-5% of the normal activity.
This study describes five novel mutations and one earlier described major mutation among Finnish VP patients. All mutations produced detectable transcripts, but resulted in decreased PPOX activity confirming the causality of the mutations and the biochemical defects in these patients.</abstract><cop>England</cop><pmid>11474578</pmid><doi>10.1007/bf03402215</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Animals COS Cells DNA Mutational Analysis Escherichia coli Escherichia coli Proteins Exons Female Finland Flavoproteins Frameshift Mutation Genetic Carrier Screening Heterozygote Humans Male Mitochondrial Proteins Mutation Mutation, Missense Oxidoreductases - deficiency Oxidoreductases - genetics Oxidoreductases Acting on CH-CH Group Donors Pedigree Point Mutation Porphyrias, Hepatic - diagnosis Porphyrias, Hepatic - genetics Protoporphyrinogen Oxidase Restriction Mapping Reverse Transcriptase Polymerase Chain Reaction Sequence Analysis, DNA Transcription, Genetic |
title | Expression and characterization of six mutations in the protoporphyrinogen oxidase gene among Finnish variegate porphyria patients |
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