Prokaryotic-style frameshifting in a plant translation system: conservation of an unusual single-tRNA slippage event

Ribosomal frameshifting signals are found in mobile genetic elements, viruses and cellular genes of prokaryotes and eukaryotes. Typically they comprise a slippery sequence, X XXY YYZ, where the frameshift occurs, and a stimulatory mRNA element. Here we studied the influence of host translational env...

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Veröffentlicht in:The EMBO journal 2003-08, Vol.22 (15), p.3941-3950
Hauptverfasser: Napthine, Sawsan, Vidakovic, Marijana, Girnary, Roseanne, Namy, Olivier, Brierley, Ian
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container_issue 15
container_start_page 3941
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creator Napthine, Sawsan
Vidakovic, Marijana
Girnary, Roseanne
Namy, Olivier
Brierley, Ian
description Ribosomal frameshifting signals are found in mobile genetic elements, viruses and cellular genes of prokaryotes and eukaryotes. Typically they comprise a slippery sequence, X XXY YYZ, where the frameshift occurs, and a stimulatory mRNA element. Here we studied the influence of host translational environment and the identity of slippery sequence‐decoding tRNAs on the frameshift mechanism. By expressing candidate signals in Escherichia coli , and in wheatgerm extracts depleted of endogenous tRNAs and supplemented with prokaryotic or eukaryotic tRNA populations, we show that when decoding AAG in the ribosomal A‐site, E.coli tRNA Lys promotes a highly unusual single‐tRNA slippage event in both prokaryotic and eukaryotic ribosomes. This event does not appear to require slippage of the adjacent P‐site tRNA, although its identity is influential. Conversely, asparaginyl‐tRNA promoted a dual slippage event in either system. Thus, the tRNAs themselves are the main determinants in the selection of single‐ or dual‐tRNA slippage mechanisms. We also show for the first time that prokaryotic tRNA Asn is not inherently ‘unslippery’ and induces efficient frameshifting when in the context of a eukaryotic translation system.
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subjects Base Sequence
E coli
EMBO31
Escherichia coli - genetics
frameshifting
Frameshifting, Ribosomal
Molecular Sequence Data
Nucleic Acid Conformation
Plants - genetics
Protein Biosynthesis
pseudoknot
ribosome
RNA, Transfer - chemistry
RNA, Transfer - genetics
translation
tRNA
title Prokaryotic-style frameshifting in a plant translation system: conservation of an unusual single-tRNA slippage event
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