Identification of a plastid response element that acts as an enhancer within the Chlamydomonas HSP70A promoter
Chloroplast-derived signals control a subset of nuclear genes in higher plants and eukaryotic algae. Among the types of signals identified are intermediates of chlorophyll biosynthesis such as Mg-protoporphyrin IX (MgProto). In Chlamydomonas reinhardtii, it was suggested that this tetrapyrrole media...
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description | Chloroplast-derived signals control a subset of nuclear genes in higher plants and eukaryotic algae. Among the types of signals identified are intermediates of chlorophyll biosynthesis such as Mg-protoporphyrin IX (MgProto). In Chlamydomonas reinhardtii, it was suggested that this tetrapyrrole mediates the light induction of chaperone gene HSP70A. Here we have analyzed cis elements involved in the regulation of HSP70A by MgProto and light. We identified two promoters and between their transcription start sites two regulatory regions that each may confer inducibility by MgProto and light to both HSP70A promoters. These regulatory regions, when cloned in front of basal non-light inducible heterologous promoters, conferred inducibility by MgProto and light. The orientation and distance independent function of these cis-regulatory sequences qualifies them as enhancers that mediate the response of nuclear genes to a chloroplast signal. Mutational analysis of one of these regulatory regions and an alignment with promoters of other MgProto-inducible genes revealed the sequence motif (G/C)CGA(C/T)N(A/G)N₁₅ (T/C/A)(A/T/G) which, as shown for HSP70A, may confer MgProto responsiveness. This cis-acting sequence element is employed for induction of HSP70A by both MgProto and light, lending support to the model that light induction of this gene is mediated via MgProto. |
doi_str_mv | 10.1093/nar/gkl602 |
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Among the types of signals identified are intermediates of chlorophyll biosynthesis such as Mg-protoporphyrin IX (MgProto). In Chlamydomonas reinhardtii, it was suggested that this tetrapyrrole mediates the light induction of chaperone gene HSP70A. Here we have analyzed cis elements involved in the regulation of HSP70A by MgProto and light. We identified two promoters and between their transcription start sites two regulatory regions that each may confer inducibility by MgProto and light to both HSP70A promoters. These regulatory regions, when cloned in front of basal non-light inducible heterologous promoters, conferred inducibility by MgProto and light. The orientation and distance independent function of these cis-regulatory sequences qualifies them as enhancers that mediate the response of nuclear genes to a chloroplast signal. Mutational analysis of one of these regulatory regions and an alignment with promoters of other MgProto-inducible genes revealed the sequence motif (G/C)CGA(C/T)N(A/G)N₁₅ (T/C/A)(A/T/G) which, as shown for HSP70A, may confer MgProto responsiveness. This cis-acting sequence element is employed for induction of HSP70A by both MgProto and light, lending support to the model that light induction of this gene is mediated via MgProto.</description><identifier>ISSN: 0305-1048</identifier><identifier>EISSN: 1362-4962</identifier><identifier>DOI: 10.1093/nar/gkl602</identifier><identifier>PMID: 16971458</identifier><identifier>CODEN: NARHAD</identifier><language>eng</language><publisher>England: Oxford Publishing Limited (England)</publisher><subject>Algal Proteins - genetics ; Animals ; biosynthesis ; Chlamydomonas ; Chlamydomonas reinhardtii ; Chlamydomonas reinhardtii - genetics ; Chlamydomonas reinhardtii - metabolism ; chlorophyll ; chloroplasts ; Enhancer Elements, Genetic ; gene induction ; genes ; heat shock proteins ; HSP70 Heat-Shock Proteins - genetics ; internal transcribed spacers ; Light ; magnesium ; Molecular Biology ; mutation ; plastids ; Plastids - genetics ; promoter regions ; Promoter Regions, Genetic ; protoporphyrin ; Protoporphyrins - metabolism ; Response Elements ; Transcription Initiation Site ; Transcriptional Activation</subject><ispartof>Nucleic acids research, 2006-10, Vol.34 (17), p.4767-4779</ispartof><rights>Copyright Oxford University Press(England) Oct 2006</rights><rights>2006 The Author(s) 2006</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c458t-20a620fecb30c8de2a0aad18f05aea6354954180a3a28a161be0481b6b3b5d8d3</citedby><cites>FETCH-LOGICAL-c458t-20a620fecb30c8de2a0aad18f05aea6354954180a3a28a161be0481b6b3b5d8d3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC1635268/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC1635268/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,864,885,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/16971458$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Gromoff, Erika D. von</creatorcontrib><creatorcontrib>Schroda, Michael</creatorcontrib><creatorcontrib>Oster, Ulrike</creatorcontrib><creatorcontrib>Beck, Christoph F</creatorcontrib><title>Identification of a plastid response element that acts as an enhancer within the Chlamydomonas HSP70A promoter</title><title>Nucleic acids research</title><addtitle>Nucleic Acids Res</addtitle><description>Chloroplast-derived signals control a subset of nuclear genes in higher plants and eukaryotic algae. Among the types of signals identified are intermediates of chlorophyll biosynthesis such as Mg-protoporphyrin IX (MgProto). In Chlamydomonas reinhardtii, it was suggested that this tetrapyrrole mediates the light induction of chaperone gene HSP70A. Here we have analyzed cis elements involved in the regulation of HSP70A by MgProto and light. We identified two promoters and between their transcription start sites two regulatory regions that each may confer inducibility by MgProto and light to both HSP70A promoters. These regulatory regions, when cloned in front of basal non-light inducible heterologous promoters, conferred inducibility by MgProto and light. The orientation and distance independent function of these cis-regulatory sequences qualifies them as enhancers that mediate the response of nuclear genes to a chloroplast signal. Mutational analysis of one of these regulatory regions and an alignment with promoters of other MgProto-inducible genes revealed the sequence motif (G/C)CGA(C/T)N(A/G)N₁₅ (T/C/A)(A/T/G) which, as shown for HSP70A, may confer MgProto responsiveness. This cis-acting sequence element is employed for induction of HSP70A by both MgProto and light, lending support to the model that light induction of this gene is mediated via MgProto.</description><subject>Algal Proteins - genetics</subject><subject>Animals</subject><subject>biosynthesis</subject><subject>Chlamydomonas</subject><subject>Chlamydomonas reinhardtii</subject><subject>Chlamydomonas reinhardtii - genetics</subject><subject>Chlamydomonas reinhardtii - metabolism</subject><subject>chlorophyll</subject><subject>chloroplasts</subject><subject>Enhancer Elements, Genetic</subject><subject>gene induction</subject><subject>genes</subject><subject>heat shock proteins</subject><subject>HSP70 Heat-Shock Proteins - genetics</subject><subject>internal transcribed spacers</subject><subject>Light</subject><subject>magnesium</subject><subject>Molecular Biology</subject><subject>mutation</subject><subject>plastids</subject><subject>Plastids - genetics</subject><subject>promoter regions</subject><subject>Promoter Regions, Genetic</subject><subject>protoporphyrin</subject><subject>Protoporphyrins - metabolism</subject><subject>Response Elements</subject><subject>Transcription Initiation Site</subject><subject>Transcriptional Activation</subject><issn>0305-1048</issn><issn>1362-4962</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2006</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkd9rFDEQx4Mo9lp98Q_Q4EMfhLWTZDfNvhTKobZQUKh9DrO72dvU3eRMckr_e0fu8NeLEBjCfPgwM1_GXgh4K6BVZwHT2ebLrEE-YiuhtKzqVsvHbAUKmkpAbY7Ycc73AKIWTf2UHQndnou6MSsWrgcXih99j8XHwOPIkW9nzMUPPLm8jSE77ma3EMbLhIVjXzJHeoG7MGHoXeLffZl8oL7j62nG5WGISwwEXd1-OodLvk30Ly49Y09GnLN7fqgn7O79u8_rq-rm44fr9eVN1dNUpZKAWsLo-k5BbwYnERAHYUZo0KFWTd02tTCACqVBoUXnaEvR6U51zWAGdcIu9t7trlvc0NPwCWe7TX7B9GAjevt3J_jJbuI3K0gutSHB6UGQ4tedy8UuPvdunjG4uMtWG7qgrMV_QdGqhpJpCXz9D3gfdynQFawE0IaMDUFv9lCfYs7Jjb9GFmB_hm0pbLsPm-CXfy75Gz2kS8CrPTBitLhJPtu7WwlCgSCXEaB-AEKssLo</recordid><startdate>20061001</startdate><enddate>20061001</enddate><creator>Gromoff, Erika D. von</creator><creator>Schroda, Michael</creator><creator>Oster, Ulrike</creator><creator>Beck, Christoph F</creator><general>Oxford Publishing Limited (England)</general><general>Oxford University Press</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7QO</scope><scope>7QP</scope><scope>7QR</scope><scope>7SS</scope><scope>7TK</scope><scope>7TM</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>K9.</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>F1W</scope><scope>H95</scope><scope>H99</scope><scope>L.F</scope><scope>L.G</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20061001</creationdate><title>Identification of a plastid response element that acts as an enhancer within the Chlamydomonas HSP70A promoter</title><author>Gromoff, Erika D. von ; 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Among the types of signals identified are intermediates of chlorophyll biosynthesis such as Mg-protoporphyrin IX (MgProto). In Chlamydomonas reinhardtii, it was suggested that this tetrapyrrole mediates the light induction of chaperone gene HSP70A. Here we have analyzed cis elements involved in the regulation of HSP70A by MgProto and light. We identified two promoters and between their transcription start sites two regulatory regions that each may confer inducibility by MgProto and light to both HSP70A promoters. These regulatory regions, when cloned in front of basal non-light inducible heterologous promoters, conferred inducibility by MgProto and light. The orientation and distance independent function of these cis-regulatory sequences qualifies them as enhancers that mediate the response of nuclear genes to a chloroplast signal. Mutational analysis of one of these regulatory regions and an alignment with promoters of other MgProto-inducible genes revealed the sequence motif (G/C)CGA(C/T)N(A/G)N₁₅ (T/C/A)(A/T/G) which, as shown for HSP70A, may confer MgProto responsiveness. This cis-acting sequence element is employed for induction of HSP70A by both MgProto and light, lending support to the model that light induction of this gene is mediated via MgProto.</abstract><cop>England</cop><pub>Oxford Publishing Limited (England)</pub><pmid>16971458</pmid><doi>10.1093/nar/gkl602</doi><tpages>13</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Algal Proteins - genetics Animals biosynthesis Chlamydomonas Chlamydomonas reinhardtii Chlamydomonas reinhardtii - genetics Chlamydomonas reinhardtii - metabolism chlorophyll chloroplasts Enhancer Elements, Genetic gene induction genes heat shock proteins HSP70 Heat-Shock Proteins - genetics internal transcribed spacers Light magnesium Molecular Biology mutation plastids Plastids - genetics promoter regions Promoter Regions, Genetic protoporphyrin Protoporphyrins - metabolism Response Elements Transcription Initiation Site Transcriptional Activation |
title | Identification of a plastid response element that acts as an enhancer within the Chlamydomonas HSP70A promoter |
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