Detailed alignment of saccharum and sorghum chromosomes: comparative organization of closely related diploid and polyploid genomes

The complex polyploid genomes of three Saccharum species have been aligned with the compact diploid genome of Sorghum (2n = 2x = 20). A set of 428 DNA probes from different Poaceae (grasses) detected 2460 loci in F1 progeny of the crosses Saccharum officinarum Green German x S. spontaneum IND 81-146...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Genetics (Austin) 1998-12, Vol.150 (4), p.1663-1682
Hauptverfasser: Ming, R. (Texas AandM University, College Station.), Liu, S.C, Lin, Y.R, Silva, J. da, Wilson, W, Braga, D, Van Deynze, A, Wenslaff, T.F, Wu, K.K, Moore, P.H
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 1682
container_issue 4
container_start_page 1663
container_title Genetics (Austin)
container_volume 150
creator Ming, R. (Texas AandM University, College Station.)
Liu, S.C
Lin, Y.R
Silva, J. da
Wilson, W
Braga, D
Van Deynze, A
Wenslaff, T.F
Wu, K.K
Moore, P.H
description The complex polyploid genomes of three Saccharum species have been aligned with the compact diploid genome of Sorghum (2n = 2x = 20). A set of 428 DNA probes from different Poaceae (grasses) detected 2460 loci in F1 progeny of the crosses Saccharum officinarum Green German x S. spontaneum IND 81-146, and S. spontaneum PIN 84-1 x S. officinarum Muntok Java. Thirty-one DNA probes detected 226 loci in S. officinarum LA Purple x S. robustum Molokai 5829. Genetic maps of the six Saccharum genotypes, including up to 72 linkage groups, were assembled into "homologous groups" based on parallel arrangements of duplicated loci. About 84% of the loci mapped by 242 common probes were homologous between Saccharum and Sorghum. Only one interchromosomal and two intrachromosomal rearrangements differentiated both S. officinarum and S. spontaneum from Sorghum, but 11 additional cases of chromosome structural polymorphism were found within Saccharum. Diploidization was advanced in S. robustum, incipient in S. officinarum, and absent in S. spontaneum, consistent with biogeographic data suggesting that S. robustum is the ancestor of S. officinarum, but raising new questions about the antiquity of S. spontaneum. The densely mapped Sorghum genome will be a valuable tool in ongoing molecular analysis of the complex Saccharum genome.
doi_str_mv 10.1093/genetics/150.4.1663
format Article
fullrecord <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_1460436</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>39944812</sourcerecordid><originalsourceid>FETCH-LOGICAL-c578t-4577bda6f03af822a2fe9ca950cac6650724f2a45eda614a9af5fd1fa7af34ff3</originalsourceid><addsrcrecordid>eNptkU9v1DAQxS0EKkvhEyCkiAOcsvXEjhNzQEIt_6RKHKBna-rYiSsnXuykq-XYT46XXSpAnOzRe_PTPD1CngNdA5XsrDeTmZ1OZ1DTNV-DEOwBWYHkrKwEg4dkRSmIUjQMHpMnKd1QSoWs2xNyIltW1RxW5O7CzOi86Qr0rp9GM81FsEVCrQeMy1jg1BUpxH7Ifz3EMIYURpPeFDqMG4w4u1tTZB0n9yMPYdqvax-S8bsiGo9zZndu44PrfsE2we8OU75_j3pKHln0yTw7vqfk6sP7b-efyssvHz-fv7ssdd20c8nrprnuUFjK0LZVhZU1UqOsqUYtRE2bitsKeW2yCThKtLXtwGKDlnFr2Sl5e-BuluvRdDpHjejVJroR404FdOpvZXKD6sOtAi4oZyIDXh0BMXxfTJrV6JI23uNkwpIUNMBEK5tsfPmP8SYsccrhVAUcKs6gzSZ2MOkYUorG3l8CVO37Vb_7VblfxdW-37z14s8Q9zvHQrP--qAPrh-2LhqVRvQ-u0Ftt9v_kSwGhX10SV19BSkbKnkrJfsJdGq_Fg</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>214124318</pqid></control><display><type>article</type><title>Detailed alignment of saccharum and sorghum chromosomes: comparative organization of closely related diploid and polyploid genomes</title><source>Oxford University Press Journals All Titles (1996-Current)</source><source>MEDLINE</source><source>Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals</source><source>Alma/SFX Local Collection</source><creator>Ming, R. (Texas AandM University, College Station.) ; Liu, S.C ; Lin, Y.R ; Silva, J. da ; Wilson, W ; Braga, D ; Van Deynze, A ; Wenslaff, T.F ; Wu, K.K ; Moore, P.H</creator><creatorcontrib>Ming, R. (Texas AandM University, College Station.) ; Liu, S.C ; Lin, Y.R ; Silva, J. da ; Wilson, W ; Braga, D ; Van Deynze, A ; Wenslaff, T.F ; Wu, K.K ; Moore, P.H</creatorcontrib><description>The complex polyploid genomes of three Saccharum species have been aligned with the compact diploid genome of Sorghum (2n = 2x = 20). A set of 428 DNA probes from different Poaceae (grasses) detected 2460 loci in F1 progeny of the crosses Saccharum officinarum Green German x S. spontaneum IND 81-146, and S. spontaneum PIN 84-1 x S. officinarum Muntok Java. Thirty-one DNA probes detected 226 loci in S. officinarum LA Purple x S. robustum Molokai 5829. Genetic maps of the six Saccharum genotypes, including up to 72 linkage groups, were assembled into "homologous groups" based on parallel arrangements of duplicated loci. About 84% of the loci mapped by 242 common probes were homologous between Saccharum and Sorghum. Only one interchromosomal and two intrachromosomal rearrangements differentiated both S. officinarum and S. spontaneum from Sorghum, but 11 additional cases of chromosome structural polymorphism were found within Saccharum. Diploidization was advanced in S. robustum, incipient in S. officinarum, and absent in S. spontaneum, consistent with biogeographic data suggesting that S. robustum is the ancestor of S. officinarum, but raising new questions about the antiquity of S. spontaneum. The densely mapped Sorghum genome will be a valuable tool in ongoing molecular analysis of the complex Saccharum genome.</description><identifier>ISSN: 0016-6731</identifier><identifier>ISSN: 1943-2631</identifier><identifier>EISSN: 1943-2631</identifier><identifier>DOI: 10.1093/genetics/150.4.1663</identifier><identifier>PMID: 9832541</identifier><identifier>CODEN: GENTAE</identifier><language>eng</language><publisher>United States: Genetics Soc America</publisher><subject>ADN ; ANALYTICAL METHODS ; APAREAMIENTO CROMOSOMICO ; APPARIEMENT CHROMOSOMIQUE ; BIOLOGICAL DIFFERENCES ; CARTE GENETIQUE ; CHROMOSOME ; CHROMOSOME ANALYSIS ; CHROMOSOME MAPS ; CHROMOSOME PAIRING ; CHROMOSOMES ; CROMOSOMAS ; Deoxyribonucleic acid ; DIFERENCIAS BIOLOGICAS ; DIFFERENCE BIOLOGIQUE ; DIPLOIDIA ; DIPLOIDIE ; DIPLOIDY ; DNA ; DNA, Plant ; Edible Grain - genetics ; Gene Duplication ; Gene Rearrangement ; GENETIC MAPPING ; GENETIC MAPS ; GENETIC MARKERS ; GENOME ANALYSIS ; Genome, Plant ; Genomics ; HIBRIDACION INTERESPECIFICA ; HIBRIDOS ; HYBRIDATION INTERSPECIFIQUE ; HYBRIDE ; HYBRIDS ; INTERSPECIFIC HYBRIDIZATION ; LINKAGE GROUPS ; LINKAGE MAPS ; MAPAS GENETICOS ; MARCADORES GENETICOS ; MARQUEUR GENETIQUE ; NUCLEIC PROBES ; Plants, Edible - genetics ; POLIMORFISMO ; POLIPLOIDIA ; POLYMORPHISM ; Polymorphism, Genetic ; POLYMORPHISME ; POLYPLOIDIE ; POLYPLOIDY ; RECOMBINACION ; RECOMBINAISON ; RECOMBINATION ; Recombination, Genetic ; RFLP ; SACCHARUM ; SACCHARUM OFFICINARUM ; SACCHARUM ROBUSTUM ; SACCHARUM SPONTANEUM ; SEGREGACION ; SEGREGATION ; SONDAS NUCLEICAS ; SONDE NUCLEIQUE ; SORGHUM BICOLOR ; SPECIES DIFFERENCES ; TECHNIQUE ANALYTIQUE ; TECNICAS ANALITICAS</subject><ispartof>Genetics (Austin), 1998-12, Vol.150 (4), p.1663-1682</ispartof><rights>Copyright Genetics Society of America Dec 1998</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c578t-4577bda6f03af822a2fe9ca950cac6650724f2a45eda614a9af5fd1fa7af34ff3</citedby><cites>FETCH-LOGICAL-c578t-4577bda6f03af822a2fe9ca950cac6650724f2a45eda614a9af5fd1fa7af34ff3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,776,780,881,27901,27902</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/9832541$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Ming, R. (Texas AandM University, College Station.)</creatorcontrib><creatorcontrib>Liu, S.C</creatorcontrib><creatorcontrib>Lin, Y.R</creatorcontrib><creatorcontrib>Silva, J. da</creatorcontrib><creatorcontrib>Wilson, W</creatorcontrib><creatorcontrib>Braga, D</creatorcontrib><creatorcontrib>Van Deynze, A</creatorcontrib><creatorcontrib>Wenslaff, T.F</creatorcontrib><creatorcontrib>Wu, K.K</creatorcontrib><creatorcontrib>Moore, P.H</creatorcontrib><title>Detailed alignment of saccharum and sorghum chromosomes: comparative organization of closely related diploid and polyploid genomes</title><title>Genetics (Austin)</title><addtitle>Genetics</addtitle><description>The complex polyploid genomes of three Saccharum species have been aligned with the compact diploid genome of Sorghum (2n = 2x = 20). A set of 428 DNA probes from different Poaceae (grasses) detected 2460 loci in F1 progeny of the crosses Saccharum officinarum Green German x S. spontaneum IND 81-146, and S. spontaneum PIN 84-1 x S. officinarum Muntok Java. Thirty-one DNA probes detected 226 loci in S. officinarum LA Purple x S. robustum Molokai 5829. Genetic maps of the six Saccharum genotypes, including up to 72 linkage groups, were assembled into "homologous groups" based on parallel arrangements of duplicated loci. About 84% of the loci mapped by 242 common probes were homologous between Saccharum and Sorghum. Only one interchromosomal and two intrachromosomal rearrangements differentiated both S. officinarum and S. spontaneum from Sorghum, but 11 additional cases of chromosome structural polymorphism were found within Saccharum. Diploidization was advanced in S. robustum, incipient in S. officinarum, and absent in S. spontaneum, consistent with biogeographic data suggesting that S. robustum is the ancestor of S. officinarum, but raising new questions about the antiquity of S. spontaneum. The densely mapped Sorghum genome will be a valuable tool in ongoing molecular analysis of the complex Saccharum genome.</description><subject>ADN</subject><subject>ANALYTICAL METHODS</subject><subject>APAREAMIENTO CROMOSOMICO</subject><subject>APPARIEMENT CHROMOSOMIQUE</subject><subject>BIOLOGICAL DIFFERENCES</subject><subject>CARTE GENETIQUE</subject><subject>CHROMOSOME</subject><subject>CHROMOSOME ANALYSIS</subject><subject>CHROMOSOME MAPS</subject><subject>CHROMOSOME PAIRING</subject><subject>CHROMOSOMES</subject><subject>CROMOSOMAS</subject><subject>Deoxyribonucleic acid</subject><subject>DIFERENCIAS BIOLOGICAS</subject><subject>DIFFERENCE BIOLOGIQUE</subject><subject>DIPLOIDIA</subject><subject>DIPLOIDIE</subject><subject>DIPLOIDY</subject><subject>DNA</subject><subject>DNA, Plant</subject><subject>Edible Grain - genetics</subject><subject>Gene Duplication</subject><subject>Gene Rearrangement</subject><subject>GENETIC MAPPING</subject><subject>GENETIC MAPS</subject><subject>GENETIC MARKERS</subject><subject>GENOME ANALYSIS</subject><subject>Genome, Plant</subject><subject>Genomics</subject><subject>HIBRIDACION INTERESPECIFICA</subject><subject>HIBRIDOS</subject><subject>HYBRIDATION INTERSPECIFIQUE</subject><subject>HYBRIDE</subject><subject>HYBRIDS</subject><subject>INTERSPECIFIC HYBRIDIZATION</subject><subject>LINKAGE GROUPS</subject><subject>LINKAGE MAPS</subject><subject>MAPAS GENETICOS</subject><subject>MARCADORES GENETICOS</subject><subject>MARQUEUR GENETIQUE</subject><subject>NUCLEIC PROBES</subject><subject>Plants, Edible - genetics</subject><subject>POLIMORFISMO</subject><subject>POLIPLOIDIA</subject><subject>POLYMORPHISM</subject><subject>Polymorphism, Genetic</subject><subject>POLYMORPHISME</subject><subject>POLYPLOIDIE</subject><subject>POLYPLOIDY</subject><subject>RECOMBINACION</subject><subject>RECOMBINAISON</subject><subject>RECOMBINATION</subject><subject>Recombination, Genetic</subject><subject>RFLP</subject><subject>SACCHARUM</subject><subject>SACCHARUM OFFICINARUM</subject><subject>SACCHARUM ROBUSTUM</subject><subject>SACCHARUM SPONTANEUM</subject><subject>SEGREGACION</subject><subject>SEGREGATION</subject><subject>SONDAS NUCLEICAS</subject><subject>SONDE NUCLEIQUE</subject><subject>SORGHUM BICOLOR</subject><subject>SPECIES DIFFERENCES</subject><subject>TECHNIQUE ANALYTIQUE</subject><subject>TECNICAS ANALITICAS</subject><issn>0016-6731</issn><issn>1943-2631</issn><issn>1943-2631</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1998</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNptkU9v1DAQxS0EKkvhEyCkiAOcsvXEjhNzQEIt_6RKHKBna-rYiSsnXuykq-XYT46XXSpAnOzRe_PTPD1CngNdA5XsrDeTmZ1OZ1DTNV-DEOwBWYHkrKwEg4dkRSmIUjQMHpMnKd1QSoWs2xNyIltW1RxW5O7CzOi86Qr0rp9GM81FsEVCrQeMy1jg1BUpxH7Ifz3EMIYURpPeFDqMG4w4u1tTZB0n9yMPYdqvax-S8bsiGo9zZndu44PrfsE2we8OU75_j3pKHln0yTw7vqfk6sP7b-efyssvHz-fv7ssdd20c8nrprnuUFjK0LZVhZU1UqOsqUYtRE2bitsKeW2yCThKtLXtwGKDlnFr2Sl5e-BuluvRdDpHjejVJroR404FdOpvZXKD6sOtAi4oZyIDXh0BMXxfTJrV6JI23uNkwpIUNMBEK5tsfPmP8SYsccrhVAUcKs6gzSZ2MOkYUorG3l8CVO37Vb_7VblfxdW-37z14s8Q9zvHQrP--qAPrh-2LhqVRvQ-u0Ftt9v_kSwGhX10SV19BSkbKnkrJfsJdGq_Fg</recordid><startdate>199812</startdate><enddate>199812</enddate><creator>Ming, R. (Texas AandM University, College Station.)</creator><creator>Liu, S.C</creator><creator>Lin, Y.R</creator><creator>Silva, J. da</creator><creator>Wilson, W</creator><creator>Braga, D</creator><creator>Van Deynze, A</creator><creator>Wenslaff, T.F</creator><creator>Wu, K.K</creator><creator>Moore, P.H</creator><general>Genetics Soc America</general><general>Genetics Society of America</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>4T-</scope><scope>4U-</scope><scope>7QP</scope><scope>7SS</scope><scope>7TK</scope><scope>7TM</scope><scope>8FD</scope><scope>FR3</scope><scope>K9.</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>5PM</scope></search><sort><creationdate>199812</creationdate><title>Detailed alignment of saccharum and sorghum chromosomes: comparative organization of closely related diploid and polyploid genomes</title><author>Ming, R. (Texas AandM University, College Station.) ; Liu, S.C ; Lin, Y.R ; Silva, J. da ; Wilson, W ; Braga, D ; Van Deynze, A ; Wenslaff, T.F ; Wu, K.K ; Moore, P.H</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c578t-4577bda6f03af822a2fe9ca950cac6650724f2a45eda614a9af5fd1fa7af34ff3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1998</creationdate><topic>ADN</topic><topic>ANALYTICAL METHODS</topic><topic>APAREAMIENTO CROMOSOMICO</topic><topic>APPARIEMENT CHROMOSOMIQUE</topic><topic>BIOLOGICAL DIFFERENCES</topic><topic>CARTE GENETIQUE</topic><topic>CHROMOSOME</topic><topic>CHROMOSOME ANALYSIS</topic><topic>CHROMOSOME MAPS</topic><topic>CHROMOSOME PAIRING</topic><topic>CHROMOSOMES</topic><topic>CROMOSOMAS</topic><topic>Deoxyribonucleic acid</topic><topic>DIFERENCIAS BIOLOGICAS</topic><topic>DIFFERENCE BIOLOGIQUE</topic><topic>DIPLOIDIA</topic><topic>DIPLOIDIE</topic><topic>DIPLOIDY</topic><topic>DNA</topic><topic>DNA, Plant</topic><topic>Edible Grain - genetics</topic><topic>Gene Duplication</topic><topic>Gene Rearrangement</topic><topic>GENETIC MAPPING</topic><topic>GENETIC MAPS</topic><topic>GENETIC MARKERS</topic><topic>GENOME ANALYSIS</topic><topic>Genome, Plant</topic><topic>Genomics</topic><topic>HIBRIDACION INTERESPECIFICA</topic><topic>HIBRIDOS</topic><topic>HYBRIDATION INTERSPECIFIQUE</topic><topic>HYBRIDE</topic><topic>HYBRIDS</topic><topic>INTERSPECIFIC HYBRIDIZATION</topic><topic>LINKAGE GROUPS</topic><topic>LINKAGE MAPS</topic><topic>MAPAS GENETICOS</topic><topic>MARCADORES GENETICOS</topic><topic>MARQUEUR GENETIQUE</topic><topic>NUCLEIC PROBES</topic><topic>Plants, Edible - genetics</topic><topic>POLIMORFISMO</topic><topic>POLIPLOIDIA</topic><topic>POLYMORPHISM</topic><topic>Polymorphism, Genetic</topic><topic>POLYMORPHISME</topic><topic>POLYPLOIDIE</topic><topic>POLYPLOIDY</topic><topic>RECOMBINACION</topic><topic>RECOMBINAISON</topic><topic>RECOMBINATION</topic><topic>Recombination, Genetic</topic><topic>RFLP</topic><topic>SACCHARUM</topic><topic>SACCHARUM OFFICINARUM</topic><topic>SACCHARUM ROBUSTUM</topic><topic>SACCHARUM SPONTANEUM</topic><topic>SEGREGACION</topic><topic>SEGREGATION</topic><topic>SONDAS NUCLEICAS</topic><topic>SONDE NUCLEIQUE</topic><topic>SORGHUM BICOLOR</topic><topic>SPECIES DIFFERENCES</topic><topic>TECHNIQUE ANALYTIQUE</topic><topic>TECNICAS ANALITICAS</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ming, R. (Texas AandM University, College Station.)</creatorcontrib><creatorcontrib>Liu, S.C</creatorcontrib><creatorcontrib>Lin, Y.R</creatorcontrib><creatorcontrib>Silva, J. da</creatorcontrib><creatorcontrib>Wilson, W</creatorcontrib><creatorcontrib>Braga, D</creatorcontrib><creatorcontrib>Van Deynze, A</creatorcontrib><creatorcontrib>Wenslaff, T.F</creatorcontrib><creatorcontrib>Wu, K.K</creatorcontrib><creatorcontrib>Moore, P.H</creatorcontrib><collection>AGRIS</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Docstoc</collection><collection>University Readers</collection><collection>Calcium &amp; Calcified Tissue Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>ProQuest Health &amp; Medical Complete (Alumni)</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Genetics (Austin)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ming, R. (Texas AandM University, College Station.)</au><au>Liu, S.C</au><au>Lin, Y.R</au><au>Silva, J. da</au><au>Wilson, W</au><au>Braga, D</au><au>Van Deynze, A</au><au>Wenslaff, T.F</au><au>Wu, K.K</au><au>Moore, P.H</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Detailed alignment of saccharum and sorghum chromosomes: comparative organization of closely related diploid and polyploid genomes</atitle><jtitle>Genetics (Austin)</jtitle><addtitle>Genetics</addtitle><date>1998-12</date><risdate>1998</risdate><volume>150</volume><issue>4</issue><spage>1663</spage><epage>1682</epage><pages>1663-1682</pages><issn>0016-6731</issn><issn>1943-2631</issn><eissn>1943-2631</eissn><coden>GENTAE</coden><abstract>The complex polyploid genomes of three Saccharum species have been aligned with the compact diploid genome of Sorghum (2n = 2x = 20). A set of 428 DNA probes from different Poaceae (grasses) detected 2460 loci in F1 progeny of the crosses Saccharum officinarum Green German x S. spontaneum IND 81-146, and S. spontaneum PIN 84-1 x S. officinarum Muntok Java. Thirty-one DNA probes detected 226 loci in S. officinarum LA Purple x S. robustum Molokai 5829. Genetic maps of the six Saccharum genotypes, including up to 72 linkage groups, were assembled into "homologous groups" based on parallel arrangements of duplicated loci. About 84% of the loci mapped by 242 common probes were homologous between Saccharum and Sorghum. Only one interchromosomal and two intrachromosomal rearrangements differentiated both S. officinarum and S. spontaneum from Sorghum, but 11 additional cases of chromosome structural polymorphism were found within Saccharum. Diploidization was advanced in S. robustum, incipient in S. officinarum, and absent in S. spontaneum, consistent with biogeographic data suggesting that S. robustum is the ancestor of S. officinarum, but raising new questions about the antiquity of S. spontaneum. The densely mapped Sorghum genome will be a valuable tool in ongoing molecular analysis of the complex Saccharum genome.</abstract><cop>United States</cop><pub>Genetics Soc America</pub><pmid>9832541</pmid><doi>10.1093/genetics/150.4.1663</doi><tpages>20</tpages><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 0016-6731
ispartof Genetics (Austin), 1998-12, Vol.150 (4), p.1663-1682
issn 0016-6731
1943-2631
1943-2631
language eng
recordid cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_1460436
source Oxford University Press Journals All Titles (1996-Current); MEDLINE; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; Alma/SFX Local Collection
subjects ADN
ANALYTICAL METHODS
APAREAMIENTO CROMOSOMICO
APPARIEMENT CHROMOSOMIQUE
BIOLOGICAL DIFFERENCES
CARTE GENETIQUE
CHROMOSOME
CHROMOSOME ANALYSIS
CHROMOSOME MAPS
CHROMOSOME PAIRING
CHROMOSOMES
CROMOSOMAS
Deoxyribonucleic acid
DIFERENCIAS BIOLOGICAS
DIFFERENCE BIOLOGIQUE
DIPLOIDIA
DIPLOIDIE
DIPLOIDY
DNA
DNA, Plant
Edible Grain - genetics
Gene Duplication
Gene Rearrangement
GENETIC MAPPING
GENETIC MAPS
GENETIC MARKERS
GENOME ANALYSIS
Genome, Plant
Genomics
HIBRIDACION INTERESPECIFICA
HIBRIDOS
HYBRIDATION INTERSPECIFIQUE
HYBRIDE
HYBRIDS
INTERSPECIFIC HYBRIDIZATION
LINKAGE GROUPS
LINKAGE MAPS
MAPAS GENETICOS
MARCADORES GENETICOS
MARQUEUR GENETIQUE
NUCLEIC PROBES
Plants, Edible - genetics
POLIMORFISMO
POLIPLOIDIA
POLYMORPHISM
Polymorphism, Genetic
POLYMORPHISME
POLYPLOIDIE
POLYPLOIDY
RECOMBINACION
RECOMBINAISON
RECOMBINATION
Recombination, Genetic
RFLP
SACCHARUM
SACCHARUM OFFICINARUM
SACCHARUM ROBUSTUM
SACCHARUM SPONTANEUM
SEGREGACION
SEGREGATION
SONDAS NUCLEICAS
SONDE NUCLEIQUE
SORGHUM BICOLOR
SPECIES DIFFERENCES
TECHNIQUE ANALYTIQUE
TECNICAS ANALITICAS
title Detailed alignment of saccharum and sorghum chromosomes: comparative organization of closely related diploid and polyploid genomes
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-30T06%3A28%3A08IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Detailed%20alignment%20of%20saccharum%20and%20sorghum%20chromosomes:%20comparative%20organization%20of%20closely%20related%20diploid%20and%20polyploid%20genomes&rft.jtitle=Genetics%20(Austin)&rft.au=Ming,%20R.%20(Texas%20AandM%20University,%20College%20Station.)&rft.date=1998-12&rft.volume=150&rft.issue=4&rft.spage=1663&rft.epage=1682&rft.pages=1663-1682&rft.issn=0016-6731&rft.eissn=1943-2631&rft.coden=GENTAE&rft_id=info:doi/10.1093/genetics/150.4.1663&rft_dat=%3Cproquest_pubme%3E39944812%3C/proquest_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=214124318&rft_id=info:pmid/9832541&rfr_iscdi=true