Directed Evolution to Probe Protein Allostery and Integrin I Domains of 200,000-Fold Higher Affinity
Understanding allostery may serve to both elucidate mechanisms of protein regulation and provide a basis for engineering active mutants. Herein we describe directed evolution applied to the integrin$\alpha_{L}$inserted domain for studying allostery by using a yeast surface display system. Many hot s...
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Veröffentlicht in: | Proceedings of the National Academy of Sciences - PNAS 2006-04, Vol.103 (15), p.5758-5763 |
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creator | Jin, Moonsoo Song, Gang Carman, Christopher V. Kim, Yong-Sung Astrof, Nathan S. Shimaoka, Motomu Wittrup, Dane K. Springer, Timothy A. |
description | Understanding allostery may serve to both elucidate mechanisms of protein regulation and provide a basis for engineering active mutants. Herein we describe directed evolution applied to the integrin$\alpha_{L}$inserted domain for studying allostery by using a yeast surface display system. Many hot spots for activation are identified, and some single mutants exhibit remarkable increases of 10,000-fold in affinity for a physiological ligand, intercellular adhesion molecule-1. The location of activating mutations traces out an allosteric interface in the interior of the inserted domain that connects the ligand binding site to the α7-helix, which communicates allostery to neighboring domains in intact integrins. The combination of two activating mutations (F265S/F292G) leads to an increase of 200,000-fold in affinity to intercellular adhesion molecule-1. The F265S/F292G mutant is potent in antagonizing lymphocyte function-associated antigen 1-dependent lymphocyte adhesion, aggregation, and transmigration. |
doi_str_mv | 10.1073/pnas.0601164103 |
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Herein we describe directed evolution applied to the integrin$\alpha_{L}$inserted domain for studying allostery by using a yeast surface display system. Many hot spots for activation are identified, and some single mutants exhibit remarkable increases of 10,000-fold in affinity for a physiological ligand, intercellular adhesion molecule-1. The location of activating mutations traces out an allosteric interface in the interior of the inserted domain that connects the ligand binding site to the α7-helix, which communicates allostery to neighboring domains in intact integrins. The combination of two activating mutations (F265S/F292G) leads to an increase of 200,000-fold in affinity to intercellular adhesion molecule-1. The F265S/F292G mutant is potent in antagonizing lymphocyte function-associated antigen 1-dependent lymphocyte adhesion, aggregation, and transmigration.</description><identifier>ISSN: 0027-8424</identifier><identifier>EISSN: 1091-6490</identifier><identifier>DOI: 10.1073/pnas.0601164103</identifier><identifier>PMID: 16595626</identifier><language>eng</language><publisher>United States: National Academy of Sciences</publisher><subject>Adhesion ; Aggregation ; Allosteric Regulation ; Amino Acid Sequence ; Antibodies ; Binding Sites ; Biological Sciences ; Biophysics ; Cell adhesion & migration ; Directed Molecular Evolution ; Evolution ; Integrins ; Integrins - chemistry ; Integrins - metabolism ; Intercellular Adhesion Molecule-1 - chemistry ; Intercellular Adhesion Molecule-1 - genetics ; Intercellular Adhesion Molecule-1 - metabolism ; Kinetics ; Libraries ; Ligands ; Lymphocytes ; Models, Molecular ; Molecular Sequence Data ; Mutagenesis ; Mutation ; Polymerase Chain Reaction ; Protein Structure, Secondary ; Proteins ; Proteins - chemistry ; Proteins - metabolism ; Recombinant Proteins - chemistry ; Recombinant Proteins - metabolism ; Saccharomyces cerevisiae Proteins - chemistry ; Saccharomyces cerevisiae Proteins - metabolism ; Solubility ; Surface Plasmon Resonance ; Yeast ; Yeasts</subject><ispartof>Proceedings of the National Academy of Sciences - PNAS, 2006-04, Vol.103 (15), p.5758-5763</ispartof><rights>Copyright 2006 National Academy of Sciences of the United States of America</rights><rights>Copyright National Academy of Sciences Apr 11, 2006</rights><rights>2006 by The National Academy of Sciences of the USA 2006</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c528t-9de1634f122198f16befb4d105303a5e22c6dc5ca8d8d93d881676b1bb9f63c83</citedby><cites>FETCH-LOGICAL-c528t-9de1634f122198f16befb4d105303a5e22c6dc5ca8d8d93d881676b1bb9f63c83</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/30050173$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/30050173$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>230,314,727,780,784,803,885,27924,27925,53791,53793,58017,58250</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/16595626$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Jin, Moonsoo</creatorcontrib><creatorcontrib>Song, Gang</creatorcontrib><creatorcontrib>Carman, Christopher V.</creatorcontrib><creatorcontrib>Kim, Yong-Sung</creatorcontrib><creatorcontrib>Astrof, Nathan S.</creatorcontrib><creatorcontrib>Shimaoka, Motomu</creatorcontrib><creatorcontrib>Wittrup, Dane K.</creatorcontrib><creatorcontrib>Springer, Timothy A.</creatorcontrib><title>Directed Evolution to Probe Protein Allostery and Integrin I Domains of 200,000-Fold Higher Affinity</title><title>Proceedings of the National Academy of Sciences - PNAS</title><addtitle>Proc Natl Acad Sci U S A</addtitle><description>Understanding allostery may serve to both elucidate mechanisms of protein regulation and provide a basis for engineering active mutants. Herein we describe directed evolution applied to the integrin$\alpha_{L}$inserted domain for studying allostery by using a yeast surface display system. Many hot spots for activation are identified, and some single mutants exhibit remarkable increases of 10,000-fold in affinity for a physiological ligand, intercellular adhesion molecule-1. The location of activating mutations traces out an allosteric interface in the interior of the inserted domain that connects the ligand binding site to the α7-helix, which communicates allostery to neighboring domains in intact integrins. The combination of two activating mutations (F265S/F292G) leads to an increase of 200,000-fold in affinity to intercellular adhesion molecule-1. The F265S/F292G mutant is potent in antagonizing lymphocyte function-associated antigen 1-dependent lymphocyte adhesion, aggregation, and transmigration.</description><subject>Adhesion</subject><subject>Aggregation</subject><subject>Allosteric Regulation</subject><subject>Amino Acid Sequence</subject><subject>Antibodies</subject><subject>Binding Sites</subject><subject>Biological Sciences</subject><subject>Biophysics</subject><subject>Cell adhesion & migration</subject><subject>Directed Molecular Evolution</subject><subject>Evolution</subject><subject>Integrins</subject><subject>Integrins - chemistry</subject><subject>Integrins - metabolism</subject><subject>Intercellular Adhesion Molecule-1 - chemistry</subject><subject>Intercellular Adhesion Molecule-1 - genetics</subject><subject>Intercellular Adhesion Molecule-1 - metabolism</subject><subject>Kinetics</subject><subject>Libraries</subject><subject>Ligands</subject><subject>Lymphocytes</subject><subject>Models, Molecular</subject><subject>Molecular Sequence Data</subject><subject>Mutagenesis</subject><subject>Mutation</subject><subject>Polymerase Chain Reaction</subject><subject>Protein Structure, Secondary</subject><subject>Proteins</subject><subject>Proteins - chemistry</subject><subject>Proteins - metabolism</subject><subject>Recombinant Proteins - chemistry</subject><subject>Recombinant Proteins - metabolism</subject><subject>Saccharomyces cerevisiae Proteins - chemistry</subject><subject>Saccharomyces cerevisiae Proteins - metabolism</subject><subject>Solubility</subject><subject>Surface Plasmon Resonance</subject><subject>Yeast</subject><subject>Yeasts</subject><issn>0027-8424</issn><issn>1091-6490</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2006</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkU1vEzEQhi0EoqFw5gSyOHDqtjP22uu9VIr6GakSHOBsedfe1NHGDrZTKf-ejRK1wIWLR_I8887HS8hHhHOEhl9sgsnnIAFR1gj8FZkhtFjJuoXXZAbAmkrVrD4h73JeAUArFLwlJyhFKySTM2KvfXJ9cZbePMVxW3wMtET6PcXO7d_ifKDzcYy5uLSjJli6CMUt0_S9oNdxbXzINA6UAZxNDarbOFp675ePLtH5MPjgy-49eTOYMbsPx3hKft7e_Li6rx6-3S2u5g9VL5gqVWsdSl4PyBi2akDZuaGrLYLgwI1wjPXS9qI3yirbcqsUykZ22HXtIHmv-Cm5POhutt3a2d6FksyoN8mvTdrpaLz-OxP8o17GJ421ULKWk8DXo0CKv7YuF732uXfjaIKL26xlo0QjGfsvyEBJVMAn8Ms_4CpuU5iuMDHIW6hlO0EXB6hPMefkhueREfTeZ733Wb_4PFV8_nPTF_5o7AR8OgCrXGJ6znMAAdhw_hswu6yb</recordid><startdate>20060411</startdate><enddate>20060411</enddate><creator>Jin, Moonsoo</creator><creator>Song, Gang</creator><creator>Carman, Christopher V.</creator><creator>Kim, Yong-Sung</creator><creator>Astrof, Nathan S.</creator><creator>Shimaoka, Motomu</creator><creator>Wittrup, Dane K.</creator><creator>Springer, Timothy A.</creator><general>National Academy of Sciences</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QG</scope><scope>7QL</scope><scope>7QP</scope><scope>7QR</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7TK</scope><scope>7TM</scope><scope>7TO</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20060411</creationdate><title>Directed Evolution to Probe Protein Allostery and Integrin I Domains of 200,000-Fold Higher Affinity</title><author>Jin, Moonsoo ; 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Herein we describe directed evolution applied to the integrin$\alpha_{L}$inserted domain for studying allostery by using a yeast surface display system. Many hot spots for activation are identified, and some single mutants exhibit remarkable increases of 10,000-fold in affinity for a physiological ligand, intercellular adhesion molecule-1. The location of activating mutations traces out an allosteric interface in the interior of the inserted domain that connects the ligand binding site to the α7-helix, which communicates allostery to neighboring domains in intact integrins. The combination of two activating mutations (F265S/F292G) leads to an increase of 200,000-fold in affinity to intercellular adhesion molecule-1. The F265S/F292G mutant is potent in antagonizing lymphocyte function-associated antigen 1-dependent lymphocyte adhesion, aggregation, and transmigration.</abstract><cop>United States</cop><pub>National Academy of Sciences</pub><pmid>16595626</pmid><doi>10.1073/pnas.0601164103</doi><tpages>6</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Adhesion Aggregation Allosteric Regulation Amino Acid Sequence Antibodies Binding Sites Biological Sciences Biophysics Cell adhesion & migration Directed Molecular Evolution Evolution Integrins Integrins - chemistry Integrins - metabolism Intercellular Adhesion Molecule-1 - chemistry Intercellular Adhesion Molecule-1 - genetics Intercellular Adhesion Molecule-1 - metabolism Kinetics Libraries Ligands Lymphocytes Models, Molecular Molecular Sequence Data Mutagenesis Mutation Polymerase Chain Reaction Protein Structure, Secondary Proteins Proteins - chemistry Proteins - metabolism Recombinant Proteins - chemistry Recombinant Proteins - metabolism Saccharomyces cerevisiae Proteins - chemistry Saccharomyces cerevisiae Proteins - metabolism Solubility Surface Plasmon Resonance Yeast Yeasts |
title | Directed Evolution to Probe Protein Allostery and Integrin I Domains of 200,000-Fold Higher Affinity |
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