Candidate Locus for a Nuclear Modifier Gene for Maternally Inherited Deafness
Maternally inherited deafness associated with the A1555G mutation in the mitochondrial 12S ribosomal RNA (rRNA) gene appears to require additional environmental or genetic changes for phenotypic expression. Aminoglycosides have been identified as one such environmental factor. In one large Arab-Isra...
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Veröffentlicht in: | American journal of human genetics 2000-06, Vol.66 (6), p.1905-1910 |
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container_title | American journal of human genetics |
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creator | Bykhovskaya, Yelena Estivill, Xavier Taylor, Kent Hang, Tieu Hamon, Melanie Casano, Rosaria A.M.S. Yang, Huiying Rotter, Jerome I. Shohat, Mordechai Fischel-Ghodsian, Nathan |
description | Maternally inherited deafness associated with the A1555G mutation in the mitochondrial 12S ribosomal RNA (rRNA) gene appears to require additional environmental or genetic changes for phenotypic expression. Aminoglycosides have been identified as one such environmental factor. In one large Arab-Israeli pedigree with congenital hearing loss in some of the family members with the A1555G mutation and with no exposure to aminoglycosides, biochemical evidence has suggested the role of nuclear modifier gene(s), but a genomewide search has indicated the absence of a single major locus having such an effect. Thus it has been concluded that the penetrance of the mitochondrial mutation appears to depend on additive effects of several nuclear genes. We have now investigated 10 multiplex Spanish and Italian families with 35 members with the A1555G mutation and sensorineural deafness. Parametric analysis of a genomewide screen again failed to identify significant evidence for linkage to a single autosomal locus. However, nonparametric analysis supported the role of the chromosomal region around marker D8S277. The combined maximized allele-sharing LOD score of 3.1 in Arab-Israeli/Spanish/Italian families represents a highly suggestive linkage result. We suggest that this region should be considered a candidate for containing the first human nuclear modifier gene for a mitochondrial DNA disorder. The locus operates in Arab-Israeli, Spanish, and Italian families, resulting in the deafness phenotype on a background of the mitochondrial A1555G mutation. No obvious candidate genes are located in this region. |
doi_str_mv | 10.1086/302914 |
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Aminoglycosides have been identified as one such environmental factor. In one large Arab-Israeli pedigree with congenital hearing loss in some of the family members with the A1555G mutation and with no exposure to aminoglycosides, biochemical evidence has suggested the role of nuclear modifier gene(s), but a genomewide search has indicated the absence of a single major locus having such an effect. Thus it has been concluded that the penetrance of the mitochondrial mutation appears to depend on additive effects of several nuclear genes. We have now investigated 10 multiplex Spanish and Italian families with 35 members with the A1555G mutation and sensorineural deafness. Parametric analysis of a genomewide screen again failed to identify significant evidence for linkage to a single autosomal locus. However, nonparametric analysis supported the role of the chromosomal region around marker D8S277. The combined maximized allele-sharing LOD score of 3.1 in Arab-Israeli/Spanish/Italian families represents a highly suggestive linkage result. We suggest that this region should be considered a candidate for containing the first human nuclear modifier gene for a mitochondrial DNA disorder. The locus operates in Arab-Israeli, Spanish, and Italian families, resulting in the deafness phenotype on a background of the mitochondrial A1555G mutation. No obvious candidate genes are located in this region.</description><identifier>ISSN: 0002-9297</identifier><identifier>EISSN: 1537-6605</identifier><identifier>DOI: 10.1086/302914</identifier><identifier>PMID: 10788333</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Arabs - genetics ; Cell Nucleus - genetics ; Chromosome Mapping ; DNA, Mitochondrial - genetics ; Female ; Genes, Dominant ; Genes, Recessive ; Genetic Heterogeneity ; Genetic Linkage - genetics ; Genetic Markers - genetics ; Hearing Loss, Sensorineural - congenital ; Hearing Loss, Sensorineural - genetics ; Humans ; Israel ; Italy ; Lod Score ; Male ; Matched-Pair Analysis ; Models, Genetic ; Mutation - genetics ; Pedigree ; Penetrance ; RNA, Ribosomal - genetics ; Spain ; Statistics, Nonparametric</subject><ispartof>American journal of human genetics, 2000-06, Vol.66 (6), p.1905-1910</ispartof><rights>2000 The American Society of Human Genetics</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c401t-b465393606ccfab2681909dd785bf5bf7c4e831b39922831f690222bc82d3fa23</citedby><cites>FETCH-LOGICAL-c401t-b465393606ccfab2681909dd785bf5bf7c4e831b39922831f690222bc82d3fa23</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC1378050/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0002929707635423$$EHTML$$P50$$Gelsevier$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,3537,27901,27902,53766,53768,65306</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/10788333$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Bykhovskaya, Yelena</creatorcontrib><creatorcontrib>Estivill, Xavier</creatorcontrib><creatorcontrib>Taylor, Kent</creatorcontrib><creatorcontrib>Hang, Tieu</creatorcontrib><creatorcontrib>Hamon, Melanie</creatorcontrib><creatorcontrib>Casano, Rosaria A.M.S.</creatorcontrib><creatorcontrib>Yang, Huiying</creatorcontrib><creatorcontrib>Rotter, Jerome I.</creatorcontrib><creatorcontrib>Shohat, Mordechai</creatorcontrib><creatorcontrib>Fischel-Ghodsian, Nathan</creatorcontrib><title>Candidate Locus for a Nuclear Modifier Gene for Maternally Inherited Deafness</title><title>American journal of human genetics</title><addtitle>Am J Hum Genet</addtitle><description>Maternally inherited deafness associated with the A1555G mutation in the mitochondrial 12S ribosomal RNA (rRNA) gene appears to require additional environmental or genetic changes for phenotypic expression. Aminoglycosides have been identified as one such environmental factor. In one large Arab-Israeli pedigree with congenital hearing loss in some of the family members with the A1555G mutation and with no exposure to aminoglycosides, biochemical evidence has suggested the role of nuclear modifier gene(s), but a genomewide search has indicated the absence of a single major locus having such an effect. Thus it has been concluded that the penetrance of the mitochondrial mutation appears to depend on additive effects of several nuclear genes. We have now investigated 10 multiplex Spanish and Italian families with 35 members with the A1555G mutation and sensorineural deafness. Parametric analysis of a genomewide screen again failed to identify significant evidence for linkage to a single autosomal locus. However, nonparametric analysis supported the role of the chromosomal region around marker D8S277. The combined maximized allele-sharing LOD score of 3.1 in Arab-Israeli/Spanish/Italian families represents a highly suggestive linkage result. We suggest that this region should be considered a candidate for containing the first human nuclear modifier gene for a mitochondrial DNA disorder. The locus operates in Arab-Israeli, Spanish, and Italian families, resulting in the deafness phenotype on a background of the mitochondrial A1555G mutation. No obvious candidate genes are located in this region.</description><subject>Arabs - genetics</subject><subject>Cell Nucleus - genetics</subject><subject>Chromosome Mapping</subject><subject>DNA, Mitochondrial - genetics</subject><subject>Female</subject><subject>Genes, Dominant</subject><subject>Genes, Recessive</subject><subject>Genetic Heterogeneity</subject><subject>Genetic Linkage - genetics</subject><subject>Genetic Markers - genetics</subject><subject>Hearing Loss, Sensorineural - congenital</subject><subject>Hearing Loss, Sensorineural - genetics</subject><subject>Humans</subject><subject>Israel</subject><subject>Italy</subject><subject>Lod Score</subject><subject>Male</subject><subject>Matched-Pair Analysis</subject><subject>Models, Genetic</subject><subject>Mutation - genetics</subject><subject>Pedigree</subject><subject>Penetrance</subject><subject>RNA, Ribosomal - genetics</subject><subject>Spain</subject><subject>Statistics, Nonparametric</subject><issn>0002-9297</issn><issn>1537-6605</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2000</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpdkFFLHDEQx4NU6tW2H0H2qW_bTpLdbPIiyFWtcNe-2OeQTSaaspdosiv47Rt7IlYYmIH58Z_hR8hnCl8pSPGNA1O0OyAr2vOhFQL6d2QFAKxVTA1H5EMpfwAolcDfkyMKg5Sc8xXZrk10wZkZm02yS2l8yo1pfi52QpObbXLBB8zNJUb8t9tWNEczTY_NVbzFHGZ0zXc0PmIpH8mhN1PBT8_9mPy-OL9e_2g3vy6v1meb1nZA53bsRM8VFyCs9WZkQlIFyrlB9qOvNdgOJacjV4qxOnihgDE2Wskc94bxY3K6z71bxh06i3HOZtJ3OexMftTJBP3_JoZbfZMeNOWDhB5qwJfngJzuFyyz3oVicZpMxLQUPbC-E0NV9ALanErJ6F-OUNBP5vXefAVPXr_0CturrgDsAaxiHqpTXWzAaNGFjHbWLoW3mX8BityNXQ</recordid><startdate>20000601</startdate><enddate>20000601</enddate><creator>Bykhovskaya, Yelena</creator><creator>Estivill, Xavier</creator><creator>Taylor, Kent</creator><creator>Hang, Tieu</creator><creator>Hamon, Melanie</creator><creator>Casano, Rosaria A.M.S.</creator><creator>Yang, Huiying</creator><creator>Rotter, Jerome I.</creator><creator>Shohat, Mordechai</creator><creator>Fischel-Ghodsian, Nathan</creator><general>Elsevier Inc</general><scope>6I.</scope><scope>AAFTH</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20000601</creationdate><title>Candidate Locus for a Nuclear Modifier Gene for Maternally Inherited Deafness</title><author>Bykhovskaya, Yelena ; Estivill, Xavier ; Taylor, Kent ; Hang, Tieu ; Hamon, Melanie ; Casano, Rosaria A.M.S. ; Yang, Huiying ; Rotter, Jerome I. ; Shohat, Mordechai ; Fischel-Ghodsian, Nathan</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c401t-b465393606ccfab2681909dd785bf5bf7c4e831b39922831f690222bc82d3fa23</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2000</creationdate><topic>Arabs - genetics</topic><topic>Cell Nucleus - genetics</topic><topic>Chromosome Mapping</topic><topic>DNA, Mitochondrial - genetics</topic><topic>Female</topic><topic>Genes, Dominant</topic><topic>Genes, Recessive</topic><topic>Genetic Heterogeneity</topic><topic>Genetic Linkage - genetics</topic><topic>Genetic Markers - genetics</topic><topic>Hearing Loss, Sensorineural - congenital</topic><topic>Hearing Loss, Sensorineural - genetics</topic><topic>Humans</topic><topic>Israel</topic><topic>Italy</topic><topic>Lod Score</topic><topic>Male</topic><topic>Matched-Pair Analysis</topic><topic>Models, Genetic</topic><topic>Mutation - genetics</topic><topic>Pedigree</topic><topic>Penetrance</topic><topic>RNA, Ribosomal - genetics</topic><topic>Spain</topic><topic>Statistics, Nonparametric</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Bykhovskaya, Yelena</creatorcontrib><creatorcontrib>Estivill, Xavier</creatorcontrib><creatorcontrib>Taylor, Kent</creatorcontrib><creatorcontrib>Hang, Tieu</creatorcontrib><creatorcontrib>Hamon, Melanie</creatorcontrib><creatorcontrib>Casano, Rosaria A.M.S.</creatorcontrib><creatorcontrib>Yang, Huiying</creatorcontrib><creatorcontrib>Rotter, Jerome I.</creatorcontrib><creatorcontrib>Shohat, Mordechai</creatorcontrib><creatorcontrib>Fischel-Ghodsian, Nathan</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>American journal of human genetics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Bykhovskaya, Yelena</au><au>Estivill, Xavier</au><au>Taylor, Kent</au><au>Hang, Tieu</au><au>Hamon, Melanie</au><au>Casano, Rosaria A.M.S.</au><au>Yang, Huiying</au><au>Rotter, Jerome I.</au><au>Shohat, Mordechai</au><au>Fischel-Ghodsian, Nathan</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Candidate Locus for a Nuclear Modifier Gene for Maternally Inherited Deafness</atitle><jtitle>American journal of human genetics</jtitle><addtitle>Am J Hum Genet</addtitle><date>2000-06-01</date><risdate>2000</risdate><volume>66</volume><issue>6</issue><spage>1905</spage><epage>1910</epage><pages>1905-1910</pages><issn>0002-9297</issn><eissn>1537-6605</eissn><abstract>Maternally inherited deafness associated with the A1555G mutation in the mitochondrial 12S ribosomal RNA (rRNA) gene appears to require additional environmental or genetic changes for phenotypic expression. Aminoglycosides have been identified as one such environmental factor. In one large Arab-Israeli pedigree with congenital hearing loss in some of the family members with the A1555G mutation and with no exposure to aminoglycosides, biochemical evidence has suggested the role of nuclear modifier gene(s), but a genomewide search has indicated the absence of a single major locus having such an effect. Thus it has been concluded that the penetrance of the mitochondrial mutation appears to depend on additive effects of several nuclear genes. We have now investigated 10 multiplex Spanish and Italian families with 35 members with the A1555G mutation and sensorineural deafness. Parametric analysis of a genomewide screen again failed to identify significant evidence for linkage to a single autosomal locus. However, nonparametric analysis supported the role of the chromosomal region around marker D8S277. The combined maximized allele-sharing LOD score of 3.1 in Arab-Israeli/Spanish/Italian families represents a highly suggestive linkage result. We suggest that this region should be considered a candidate for containing the first human nuclear modifier gene for a mitochondrial DNA disorder. The locus operates in Arab-Israeli, Spanish, and Italian families, resulting in the deafness phenotype on a background of the mitochondrial A1555G mutation. No obvious candidate genes are located in this region.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>10788333</pmid><doi>10.1086/302914</doi><tpages>6</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Arabs - genetics Cell Nucleus - genetics Chromosome Mapping DNA, Mitochondrial - genetics Female Genes, Dominant Genes, Recessive Genetic Heterogeneity Genetic Linkage - genetics Genetic Markers - genetics Hearing Loss, Sensorineural - congenital Hearing Loss, Sensorineural - genetics Humans Israel Italy Lod Score Male Matched-Pair Analysis Models, Genetic Mutation - genetics Pedigree Penetrance RNA, Ribosomal - genetics Spain Statistics, Nonparametric |
title | Candidate Locus for a Nuclear Modifier Gene for Maternally Inherited Deafness |
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