Allosteric Interactions within Subsites of a Monomeric Enzyme: Kinetics of Fluorogenic Substrates of PI-Specific Phospholipase C
Two novel water-soluble fluorescein myo-inositol phosphate (FLIP) substrates, butyl-FLIP and methyl-FLIP, were used to examine the kinetics and subsite interactions of Bacillus cereus phosphatidylinositol-specific phospholipase C. Butyl-FLIP exhibited sigmoidal kinetics when initial rates are plotte...
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Veröffentlicht in: | Biophysical journal 2003-05, Vol.84 (5), p.3264-3275 |
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description | Two novel water-soluble fluorescein myo-inositol phosphate (FLIP) substrates, butyl-FLIP and methyl-FLIP, were used to examine the kinetics and subsite interactions of Bacillus cereus phosphatidylinositol-specific phospholipase C. Butyl-FLIP exhibited sigmoidal kinetics when initial rates are plotted versus substrate concentration. The data fit a Hill coefficient of 1.2–1.5, suggesting an allosteric interaction between two sites. Two substrate molecules bind to this enzyme, one at the active site and one at a subsite, causing an increase in activity. The kinetic behavior is mathematically similar to that of well-known cooperative multimeric enzymes even though this phosphatidylinositol-specific phospholipase C is a small, monomeric enzyme. The less hydrophobic substrate, methyl-FLIP, binds only to the active site and not the activator site, and thus exhibits standard hyperbolic kinetics. An analytical expression is presented that accounts for the kinetics of both substrates in the absence and presence of a nonsubstrate short-chain phospholipid, dihexanoylphosphatidylcholine. The fluorogenic substrates detect activation at much lower concentrations of dihexanoylphosphatidylcholine than previously reported. |
doi_str_mv | 10.1016/S0006-3495(03)70051-4 |
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Butyl-FLIP exhibited sigmoidal kinetics when initial rates are plotted versus substrate concentration. The data fit a Hill coefficient of 1.2–1.5, suggesting an allosteric interaction between two sites. Two substrate molecules bind to this enzyme, one at the active site and one at a subsite, causing an increase in activity. The kinetic behavior is mathematically similar to that of well-known cooperative multimeric enzymes even though this phosphatidylinositol-specific phospholipase C is a small, monomeric enzyme. The less hydrophobic substrate, methyl-FLIP, binds only to the active site and not the activator site, and thus exhibits standard hyperbolic kinetics. An analytical expression is presented that accounts for the kinetics of both substrates in the absence and presence of a nonsubstrate short-chain phospholipid, dihexanoylphosphatidylcholine. The fluorogenic substrates detect activation at much lower concentrations of dihexanoylphosphatidylcholine than previously reported.</description><identifier>ISSN: 0006-3495</identifier><identifier>EISSN: 1542-0086</identifier><identifier>DOI: 10.1016/S0006-3495(03)70051-4</identifier><identifier>PMID: 12719256</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Allosteric Site ; Bacillus cereus - chemistry ; Bacillus cereus - enzymology ; Binding Sites ; Computer Simulation ; Enzyme Activation ; Fluorescein ; Inositol Phosphates - chemistry ; Kinetics ; Models, Chemical ; Phosphatidylcholines - chemistry ; Phosphatidylinositol Diacylglycerol-Lyase - chemistry ; Phosphoinositide Phospholipase C ; Protein Binding ; Proteins ; Spectrometry, Fluorescence - methods ; Substrate Specificity</subject><ispartof>Biophysical journal, 2003-05, Vol.84 (5), p.3264-3275</ispartof><rights>2003 The Biophysical Society</rights><rights>Copyright © 2003, Biophysical Society 2003</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c463t-f94c55b1ba05aebb7edcf3076f305570edf92b91f0273178cedb6a9b084ac56c3</citedby><cites>FETCH-LOGICAL-c463t-f94c55b1ba05aebb7edcf3076f305570edf92b91f0273178cedb6a9b084ac56c3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC1302887/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://dx.doi.org/10.1016/S0006-3495(03)70051-4$$EHTML$$P50$$Gelsevier$$Hfree_for_read</linktohtml><link.rule.ids>230,315,729,782,786,887,3554,27933,27934,46004,53800,53802</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/12719256$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Bruce Birrell, G.</creatorcontrib><creatorcontrib>Zaikova, Tatiana O.</creatorcontrib><creatorcontrib>Rukavishnikov, Aleksey V.</creatorcontrib><creatorcontrib>Keana, John F.W.</creatorcontrib><creatorcontrib>Hayes Griffith, O.</creatorcontrib><title>Allosteric Interactions within Subsites of a Monomeric Enzyme: Kinetics of Fluorogenic Substrates of PI-Specific Phospholipase C</title><title>Biophysical journal</title><addtitle>Biophys J</addtitle><description>Two novel water-soluble fluorescein myo-inositol phosphate (FLIP) substrates, butyl-FLIP and methyl-FLIP, were used to examine the kinetics and subsite interactions of Bacillus cereus phosphatidylinositol-specific phospholipase C. Butyl-FLIP exhibited sigmoidal kinetics when initial rates are plotted versus substrate concentration. The data fit a Hill coefficient of 1.2–1.5, suggesting an allosteric interaction between two sites. Two substrate molecules bind to this enzyme, one at the active site and one at a subsite, causing an increase in activity. The kinetic behavior is mathematically similar to that of well-known cooperative multimeric enzymes even though this phosphatidylinositol-specific phospholipase C is a small, monomeric enzyme. The less hydrophobic substrate, methyl-FLIP, binds only to the active site and not the activator site, and thus exhibits standard hyperbolic kinetics. An analytical expression is presented that accounts for the kinetics of both substrates in the absence and presence of a nonsubstrate short-chain phospholipid, dihexanoylphosphatidylcholine. The fluorogenic substrates detect activation at much lower concentrations of dihexanoylphosphatidylcholine than previously reported.</description><subject>Allosteric Site</subject><subject>Bacillus cereus - chemistry</subject><subject>Bacillus cereus - enzymology</subject><subject>Binding Sites</subject><subject>Computer Simulation</subject><subject>Enzyme Activation</subject><subject>Fluorescein</subject><subject>Inositol Phosphates - chemistry</subject><subject>Kinetics</subject><subject>Models, Chemical</subject><subject>Phosphatidylcholines - chemistry</subject><subject>Phosphatidylinositol Diacylglycerol-Lyase - chemistry</subject><subject>Phosphoinositide Phospholipase C</subject><subject>Protein Binding</subject><subject>Proteins</subject><subject>Spectrometry, Fluorescence - methods</subject><subject>Substrate Specificity</subject><issn>0006-3495</issn><issn>1542-0086</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2003</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFUUtv1DAQthCILoWfAMoJwSEwjuM44QCqVi2sKKLSwtmyvZOuUWIH2ykqJ3463ocKnLh4Dt9rxh8hTym8okCb12sAaEpWd_wFsJcCgNOyvkcWlNdVCdA298nijnJCHsX4DYBWHOhDckIrQbuKNwvy62wYfEwYrClWLk9lkvUuFj9s2lpXrGcdbcJY-L5QxSfv_LjnnruftyO-KT5ah8maPX4xzD74a3QZ3-lSUEfl1apcT2hsn5GrrY_T1g92UhGL5WPyoFdDxCfHeUq-Xpx_WX4oLz-_Xy3PLktTNyyVfVcbzjXVCrhCrQVuTM9ANPnhXABu-q7SHe2hEoyK1uBGN6rT0NbK8MawU_L24DvNesxidHm9QU7BjircSq-s_Bdxdiuv_Y2kDKq2Fdng-dEg-O8zxiRHGw0Og3Lo5ygFq2qR4zKRH4gm-BgD9nchFOSuO7nvTu6KkcDkvju50z37e8M_qmNZmfDuQMD8TzcWg4zGosun2oAmyY23_4n4DaYCrOI</recordid><startdate>200305</startdate><enddate>200305</enddate><creator>Bruce Birrell, G.</creator><creator>Zaikova, Tatiana O.</creator><creator>Rukavishnikov, Aleksey V.</creator><creator>Keana, John F.W.</creator><creator>Hayes Griffith, O.</creator><general>Elsevier Inc</general><general>Biophysical Society</general><scope>6I.</scope><scope>AAFTH</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>200305</creationdate><title>Allosteric Interactions within Subsites of a Monomeric Enzyme: Kinetics of Fluorogenic Substrates of PI-Specific Phospholipase C</title><author>Bruce Birrell, G. ; Zaikova, Tatiana O. ; Rukavishnikov, Aleksey V. ; Keana, John F.W. ; Hayes Griffith, O.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c463t-f94c55b1ba05aebb7edcf3076f305570edf92b91f0273178cedb6a9b084ac56c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2003</creationdate><topic>Allosteric Site</topic><topic>Bacillus cereus - chemistry</topic><topic>Bacillus cereus - enzymology</topic><topic>Binding Sites</topic><topic>Computer Simulation</topic><topic>Enzyme Activation</topic><topic>Fluorescein</topic><topic>Inositol Phosphates - chemistry</topic><topic>Kinetics</topic><topic>Models, Chemical</topic><topic>Phosphatidylcholines - chemistry</topic><topic>Phosphatidylinositol Diacylglycerol-Lyase - chemistry</topic><topic>Phosphoinositide Phospholipase C</topic><topic>Protein Binding</topic><topic>Proteins</topic><topic>Spectrometry, Fluorescence - methods</topic><topic>Substrate Specificity</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Bruce Birrell, G.</creatorcontrib><creatorcontrib>Zaikova, Tatiana O.</creatorcontrib><creatorcontrib>Rukavishnikov, Aleksey V.</creatorcontrib><creatorcontrib>Keana, John F.W.</creatorcontrib><creatorcontrib>Hayes Griffith, O.</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Biophysical journal</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Bruce Birrell, G.</au><au>Zaikova, Tatiana O.</au><au>Rukavishnikov, Aleksey V.</au><au>Keana, John F.W.</au><au>Hayes Griffith, O.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Allosteric Interactions within Subsites of a Monomeric Enzyme: Kinetics of Fluorogenic Substrates of PI-Specific Phospholipase C</atitle><jtitle>Biophysical journal</jtitle><addtitle>Biophys J</addtitle><date>2003-05</date><risdate>2003</risdate><volume>84</volume><issue>5</issue><spage>3264</spage><epage>3275</epage><pages>3264-3275</pages><issn>0006-3495</issn><eissn>1542-0086</eissn><abstract>Two novel water-soluble fluorescein myo-inositol phosphate (FLIP) substrates, butyl-FLIP and methyl-FLIP, were used to examine the kinetics and subsite interactions of Bacillus cereus phosphatidylinositol-specific phospholipase C. Butyl-FLIP exhibited sigmoidal kinetics when initial rates are plotted versus substrate concentration. The data fit a Hill coefficient of 1.2–1.5, suggesting an allosteric interaction between two sites. Two substrate molecules bind to this enzyme, one at the active site and one at a subsite, causing an increase in activity. The kinetic behavior is mathematically similar to that of well-known cooperative multimeric enzymes even though this phosphatidylinositol-specific phospholipase C is a small, monomeric enzyme. The less hydrophobic substrate, methyl-FLIP, binds only to the active site and not the activator site, and thus exhibits standard hyperbolic kinetics. An analytical expression is presented that accounts for the kinetics of both substrates in the absence and presence of a nonsubstrate short-chain phospholipid, dihexanoylphosphatidylcholine. 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subjects | Allosteric Site Bacillus cereus - chemistry Bacillus cereus - enzymology Binding Sites Computer Simulation Enzyme Activation Fluorescein Inositol Phosphates - chemistry Kinetics Models, Chemical Phosphatidylcholines - chemistry Phosphatidylinositol Diacylglycerol-Lyase - chemistry Phosphoinositide Phospholipase C Protein Binding Proteins Spectrometry, Fluorescence - methods Substrate Specificity |
title | Allosteric Interactions within Subsites of a Monomeric Enzyme: Kinetics of Fluorogenic Substrates of PI-Specific Phospholipase C |
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