Ising Model of Cardiac Thin Filament Activation with Nearest-Neighbor Cooperative Interactions

We have developed a model of cardiac thin filament activation using an Ising model approach from equilibrium statistical physics. This model explicitly represents nearest-neighbor interactions between 26 troponin/tropomyosin units along a one-dimensional array that represents the cardiac thin filame...

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Veröffentlicht in:Biophysical journal 2003-02, Vol.84 (2), p.897-909
Hauptverfasser: Rice, John Jeremy, Stolovitzky, Gustavo, Tu, Yuhai, de Tombe, Pieter P.
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container_title Biophysical journal
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creator Rice, John Jeremy
Stolovitzky, Gustavo
Tu, Yuhai
de Tombe, Pieter P.
description We have developed a model of cardiac thin filament activation using an Ising model approach from equilibrium statistical physics. This model explicitly represents nearest-neighbor interactions between 26 troponin/tropomyosin units along a one-dimensional array that represents the cardiac thin filament. With transition rates chosen to match experimental data, the results show that the resulting force-pCa ( F-pCa) relations are similar to Hill functions with asymmetries, as seen in experimental data. Specifically, Hill plots showing (log(F/(1-F)) vs. log [Ca]) reveal a steeper slope below the half activation point ( Ca 50) compared with above. Parameter variation studies show interplay of parameters that affect the apparent cooperativity and asymmetry in the F-pCa relations. The model also predicts that Ca binding is uncooperative for low [Ca], becomes steeper near Ca 50, and becomes uncooperative again at higher [Ca]. The steepness near Ca 50 mirrors the steep F-pCa as a result of thermodynamic considerations. The model also predicts that the correlation between troponin/tropomyosin units along the one-dimensional array quickly decays at high and low [Ca], but near Ca 50, high correlation occurs across the whole array. This work provides a simple model that can account for the steepness and shape of F-pCa relations that other models fail to reproduce.
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The model also predicts that the correlation between troponin/tropomyosin units along the one-dimensional array quickly decays at high and low [Ca], but near Ca 50, high correlation occurs across the whole array. 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The model also predicts that the correlation between troponin/tropomyosin units along the one-dimensional array quickly decays at high and low [Ca], but near Ca 50, high correlation occurs across the whole array. This work provides a simple model that can account for the steepness and shape of F-pCa relations that other models fail to reproduce.</abstract><cop>Legacy CDMS</cop><pub>Elsevier Inc</pub><pmid>12547772</pmid><doi>10.1016/S0006-3495(03)74907-8</doi><tpages>13</tpages><oa>free_for_read</oa></addata></record>
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subjects Actin Cytoskeleton - physiology
Animals
Biophysical Theory and Modeling
Calcium
Calcium - physiology
Cellular biology
Computer Simulation
Heart
Life Sciences (General)
Macromolecular Substances
Mathematical models
Models, Biological
Molecular Motor Proteins - physiology
Myocardial Contraction - physiology
Myocardium - metabolism
Myocytes, Cardiac - physiology
Myofibrils - physiology
Protein Binding
Rats
Space life sciences
Stress, Mechanical
Tropomyosin - physiology
Troponin - physiology
title Ising Model of Cardiac Thin Filament Activation with Nearest-Neighbor Cooperative Interactions
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