Identification of Four Fimbria-Encoding Genomic Islands That Are Highly Specific for Verocytotoxin-Producing Escherichia coli Serotype O157 Strains
Verocytotoxin-producing Escherichia coli causes zoonotic food- or waterborne infection that may be associated with massive outbreaks and with the serious complication of hemolytic uremic syndrome (HUS). Serotypes O157:H7 and O157:NM are more commonly associated with HUS and outbreaks than other sero...
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description | Verocytotoxin-producing Escherichia coli causes zoonotic food- or waterborne infection that may be associated with massive outbreaks and with the serious complication of hemolytic uremic syndrome (HUS). Serotypes O157:H7 and O157:NM are more commonly associated with HUS and outbreaks than other serotypes, such as O26:H11. To determine whether a genetic basis exists for why serotype O157:H7/NM causes HUS and outbreaks more often than other serotypes, such as O26:H11, we conducted suppression subtractive hybridization (SSH) between the genomes of the sequenced O157:H7 strain EDL933 and CL1, a clinical serotype O26:H11 isolate. Genes from four EDL933 fimbria-encoding genomic O islands (OIs) (OI-1, -47, -141, and -154) were identified in the SSH library. OI-47 encodes several additional putative virulence factors, including secreted and signaling proteins, a hemolysin locus, a lipoprotein, an ABC transport system, and a lipid biosynthesis locus. The distribution of the OIs was investigated by PCR and Southern hybridization (when PCR was negative) with 69 VTEC strains belonging to 39 different serotypes corresponding to 5 seropathotypes that differ in their disease and epidemic potential. The four OIs described here were distributed almost exclusively in serotypes O157:H7 and O157:NM, which indicates that they may be associated with the ability of these strains to colonize human and/or animal intestinal tracts and to cause epidemic and serious disease more frequently than other serotypes. The occurrence of the four OIs in enteropathogenic E. coli O55:H7 strains is consistent with their vertical inheritance by VTEC O157:H7/NM from this clonally related ancestor. |
doi_str_mv | 10.1128/JCM.43.8.3840-3850.2005 |
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Serotypes O157:H7 and O157:NM are more commonly associated with HUS and outbreaks than other serotypes, such as O26:H11. To determine whether a genetic basis exists for why serotype O157:H7/NM causes HUS and outbreaks more often than other serotypes, such as O26:H11, we conducted suppression subtractive hybridization (SSH) between the genomes of the sequenced O157:H7 strain EDL933 and CL1, a clinical serotype O26:H11 isolate. Genes from four EDL933 fimbria-encoding genomic O islands (OIs) (OI-1, -47, -141, and -154) were identified in the SSH library. OI-47 encodes several additional putative virulence factors, including secreted and signaling proteins, a hemolysin locus, a lipoprotein, an ABC transport system, and a lipid biosynthesis locus. The distribution of the OIs was investigated by PCR and Southern hybridization (when PCR was negative) with 69 VTEC strains belonging to 39 different serotypes corresponding to 5 seropathotypes that differ in their disease and epidemic potential. The four OIs described here were distributed almost exclusively in serotypes O157:H7 and O157:NM, which indicates that they may be associated with the ability of these strains to colonize human and/or animal intestinal tracts and to cause epidemic and serious disease more frequently than other serotypes. The occurrence of the four OIs in enteropathogenic E. coli O55:H7 strains is consistent with their vertical inheritance by VTEC O157:H7/NM from this clonally related ancestor.</description><identifier>ISSN: 0095-1137</identifier><identifier>EISSN: 1098-660X</identifier><identifier>DOI: 10.1128/JCM.43.8.3840-3850.2005</identifier><identifier>PMID: 16081921</identifier><identifier>CODEN: JCMIDW</identifier><language>eng</language><publisher>Washington, DC: American Society for Microbiology</publisher><subject>Bacteriology ; Biological and medical sciences ; Escherichia coli O157 - classification ; Escherichia coli O157 - pathogenicity ; Fimbriae, Bacterial - genetics ; Fundamental and applied biological sciences. Psychology ; Gene Library ; Genomic Islands ; Infectious diseases ; Medical sciences ; Microbiology ; Miscellaneous ; Shiga Toxins - biosynthesis</subject><ispartof>Journal of Clinical Microbiology, 2005-08, Vol.43 (8), p.3840-3850</ispartof><rights>2005 INIST-CNRS</rights><rights>Copyright © 2005, American Society for Microbiology 2005</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c526t-d106f1d7fecd4f0ea1ef273fad6864226c00af6c55f6b09e814c3c85221015533</citedby><cites>FETCH-LOGICAL-c526t-d106f1d7fecd4f0ea1ef273fad6864226c00af6c55f6b09e814c3c85221015533</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC1233952/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC1233952/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,315,728,781,785,886,3189,3190,27929,27930,53796,53798</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=17005033$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/16081921$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Shen, Songhai</creatorcontrib><creatorcontrib>Mascarenhas, Mariola</creatorcontrib><creatorcontrib>Morgan, Robyn</creatorcontrib><creatorcontrib>Rahn, Kris</creatorcontrib><creatorcontrib>Karmali, Mohamed A</creatorcontrib><title>Identification of Four Fimbria-Encoding Genomic Islands That Are Highly Specific for Verocytotoxin-Producing Escherichia coli Serotype O157 Strains</title><title>Journal of Clinical Microbiology</title><addtitle>J Clin Microbiol</addtitle><description>Verocytotoxin-producing Escherichia coli causes zoonotic food- or waterborne infection that may be associated with massive outbreaks and with the serious complication of hemolytic uremic syndrome (HUS). Serotypes O157:H7 and O157:NM are more commonly associated with HUS and outbreaks than other serotypes, such as O26:H11. To determine whether a genetic basis exists for why serotype O157:H7/NM causes HUS and outbreaks more often than other serotypes, such as O26:H11, we conducted suppression subtractive hybridization (SSH) between the genomes of the sequenced O157:H7 strain EDL933 and CL1, a clinical serotype O26:H11 isolate. Genes from four EDL933 fimbria-encoding genomic O islands (OIs) (OI-1, -47, -141, and -154) were identified in the SSH library. OI-47 encodes several additional putative virulence factors, including secreted and signaling proteins, a hemolysin locus, a lipoprotein, an ABC transport system, and a lipid biosynthesis locus. The distribution of the OIs was investigated by PCR and Southern hybridization (when PCR was negative) with 69 VTEC strains belonging to 39 different serotypes corresponding to 5 seropathotypes that differ in their disease and epidemic potential. The four OIs described here were distributed almost exclusively in serotypes O157:H7 and O157:NM, which indicates that they may be associated with the ability of these strains to colonize human and/or animal intestinal tracts and to cause epidemic and serious disease more frequently than other serotypes. The occurrence of the four OIs in enteropathogenic E. coli O55:H7 strains is consistent with their vertical inheritance by VTEC O157:H7/NM from this clonally related ancestor.</description><subject>Bacteriology</subject><subject>Biological and medical sciences</subject><subject>Escherichia coli O157 - classification</subject><subject>Escherichia coli O157 - pathogenicity</subject><subject>Fimbriae, Bacterial - genetics</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Gene Library</subject><subject>Genomic Islands</subject><subject>Infectious diseases</subject><subject>Medical sciences</subject><subject>Microbiology</subject><subject>Miscellaneous</subject><subject>Shiga Toxins - biosynthesis</subject><issn>0095-1137</issn><issn>1098-660X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2005</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkcFu0zAYgCMEYmPwCswc4Jby_3bspBekqWq3oqEhdUPcLNexG09JXOwU6HPwwjhqReHEyQd__mz_X5ZdIkwQafX-4-zTpGCTasKqAnJWcZhQAP4kO0eYVrkQ8PVpdg4w5TkiK8-yFzE-AmBRcP48O0MBFU4pnme_lrXpB2edVoPzPfGWLPwukIXr1sGpfN5rX7t-Q65N7zunyTK2qq8juW_UQK6CITdu07R7stoaPWqI9YF8McHr_eAH_9P1-efg650eJfOoGxOcbpwi2reOrBI47LeG3CEvyWoIyvXxZfbMqjaaV8f1IntYzO9nN_nt3fVydnWba07FkNcIwmJdWqPrwoJRaCwtmVW1qERBqdAAygrNuRVrmJoKC810xSlFQM4Zu8g-HLzb3boztU6DCKqV2-A6FfbSKyf_3eldIzf-u0TK2JTTJHh3FAT_bWfiIDsXtWnThIzfRSmqggMt8b8glkIIxsoElgdQBx9jMPbPaxDkWF6m8rJgspJjeTmWl2P5dPL13585nTumTsDbI6CiVq0NqtcunrgyWYCNU3lz4JoU9ocLRqrYyUfdna5NzOWBscpLtQnJ87CigAwQKBZlxX4Dx_DOBQ</recordid><startdate>20050801</startdate><enddate>20050801</enddate><creator>Shen, Songhai</creator><creator>Mascarenhas, Mariola</creator><creator>Morgan, Robyn</creator><creator>Rahn, Kris</creator><creator>Karmali, Mohamed A</creator><general>American Society for Microbiology</general><general>American Society for Microbiology (ASM)</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>C1K</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20050801</creationdate><title>Identification of Four Fimbria-Encoding Genomic Islands That Are Highly Specific for Verocytotoxin-Producing Escherichia coli Serotype O157 Strains</title><author>Shen, Songhai ; Mascarenhas, Mariola ; Morgan, Robyn ; Rahn, Kris ; Karmali, Mohamed A</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c526t-d106f1d7fecd4f0ea1ef273fad6864226c00af6c55f6b09e814c3c85221015533</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2005</creationdate><topic>Bacteriology</topic><topic>Biological and medical sciences</topic><topic>Escherichia coli O157 - classification</topic><topic>Escherichia coli O157 - pathogenicity</topic><topic>Fimbriae, Bacterial - genetics</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Gene Library</topic><topic>Genomic Islands</topic><topic>Infectious diseases</topic><topic>Medical sciences</topic><topic>Microbiology</topic><topic>Miscellaneous</topic><topic>Shiga Toxins - biosynthesis</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Shen, Songhai</creatorcontrib><creatorcontrib>Mascarenhas, Mariola</creatorcontrib><creatorcontrib>Morgan, Robyn</creatorcontrib><creatorcontrib>Rahn, Kris</creatorcontrib><creatorcontrib>Karmali, Mohamed A</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Environmental Sciences and Pollution Management</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Journal of Clinical Microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Shen, Songhai</au><au>Mascarenhas, Mariola</au><au>Morgan, Robyn</au><au>Rahn, Kris</au><au>Karmali, Mohamed A</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Identification of Four Fimbria-Encoding Genomic Islands That Are Highly Specific for Verocytotoxin-Producing Escherichia coli Serotype O157 Strains</atitle><jtitle>Journal of Clinical Microbiology</jtitle><addtitle>J Clin Microbiol</addtitle><date>2005-08-01</date><risdate>2005</risdate><volume>43</volume><issue>8</issue><spage>3840</spage><epage>3850</epage><pages>3840-3850</pages><issn>0095-1137</issn><eissn>1098-660X</eissn><coden>JCMIDW</coden><abstract>Verocytotoxin-producing Escherichia coli causes zoonotic food- or waterborne infection that may be associated with massive outbreaks and with the serious complication of hemolytic uremic syndrome (HUS). Serotypes O157:H7 and O157:NM are more commonly associated with HUS and outbreaks than other serotypes, such as O26:H11. To determine whether a genetic basis exists for why serotype O157:H7/NM causes HUS and outbreaks more often than other serotypes, such as O26:H11, we conducted suppression subtractive hybridization (SSH) between the genomes of the sequenced O157:H7 strain EDL933 and CL1, a clinical serotype O26:H11 isolate. Genes from four EDL933 fimbria-encoding genomic O islands (OIs) (OI-1, -47, -141, and -154) were identified in the SSH library. OI-47 encodes several additional putative virulence factors, including secreted and signaling proteins, a hemolysin locus, a lipoprotein, an ABC transport system, and a lipid biosynthesis locus. The distribution of the OIs was investigated by PCR and Southern hybridization (when PCR was negative) with 69 VTEC strains belonging to 39 different serotypes corresponding to 5 seropathotypes that differ in their disease and epidemic potential. The four OIs described here were distributed almost exclusively in serotypes O157:H7 and O157:NM, which indicates that they may be associated with the ability of these strains to colonize human and/or animal intestinal tracts and to cause epidemic and serious disease more frequently than other serotypes. The occurrence of the four OIs in enteropathogenic E. coli O55:H7 strains is consistent with their vertical inheritance by VTEC O157:H7/NM from this clonally related ancestor.</abstract><cop>Washington, DC</cop><pub>American Society for Microbiology</pub><pmid>16081921</pmid><doi>10.1128/JCM.43.8.3840-3850.2005</doi><tpages>11</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Bacteriology Biological and medical sciences Escherichia coli O157 - classification Escherichia coli O157 - pathogenicity Fimbriae, Bacterial - genetics Fundamental and applied biological sciences. Psychology Gene Library Genomic Islands Infectious diseases Medical sciences Microbiology Miscellaneous Shiga Toxins - biosynthesis |
title | Identification of Four Fimbria-Encoding Genomic Islands That Are Highly Specific for Verocytotoxin-Producing Escherichia coli Serotype O157 Strains |
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