Cisplatin- and UV-damaged DNA lure the basal transcription factor TFIID/TBP
A connection between transcription and DNA repair was demonstrated previously through the characterization of TFIIH. Using filter binding as well as in vitro transcription challenge competition assays, we now show that the promoter recognition factor TATA box‐binding protein (TBP)/TFIID binds select...
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Veröffentlicht in: | The EMBO journal 1997-12, Vol.16 (24), p.7444-7456 |
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description | A connection between transcription and DNA repair was demonstrated previously through the characterization of TFIIH. Using filter binding as well as in vitro transcription challenge competition assays, we now show that the promoter recognition factor TATA box‐binding protein (TBP)/TFIID binds selectively to and is sequestered by cisplatin‐ or UV‐damaged DNA, either alone or in the context of a larger protein complex including TFIIH. Computer‐assisted 3D structural analysis reveals a remarkable similarity between the structure of the TATA box as found in its TBP complex and that of either platinated or UV‐damaged oligonucleotides. Thus, cisplatin‐treated or UV‐irradiated DNA could be used as a competing binding site which may lure TBP/TFIID away from its normal promoter sequence, partially explaining the phenomenon of DNA damage‐induced inhibition of RNA synthesis. Consistent with an involvement of damaged DNA‐specific binding of TBP in inhibiting transcription, we find that microinjection of additional TBP in living human fibroblasts alleviates the reduction in RNA synthesis after UV irradiation. Future anticancer drugs could be designed with the consideration of lesion recognition by TBP and their ability to reduce transcription. |
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Using filter binding as well as in vitro transcription challenge competition assays, we now show that the promoter recognition factor TATA box‐binding protein (TBP)/TFIID binds selectively to and is sequestered by cisplatin‐ or UV‐damaged DNA, either alone or in the context of a larger protein complex including TFIIH. Computer‐assisted 3D structural analysis reveals a remarkable similarity between the structure of the TATA box as found in its TBP complex and that of either platinated or UV‐damaged oligonucleotides. Thus, cisplatin‐treated or UV‐irradiated DNA could be used as a competing binding site which may lure TBP/TFIID away from its normal promoter sequence, partially explaining the phenomenon of DNA damage‐induced inhibition of RNA synthesis. Consistent with an involvement of damaged DNA‐specific binding of TBP in inhibiting transcription, we find that microinjection of additional TBP in living human fibroblasts alleviates the reduction in RNA synthesis after UV irradiation. Future anticancer drugs could be designed with the consideration of lesion recognition by TBP and their ability to reduce transcription.</description><identifier>ISSN: 0261-4189</identifier><identifier>ISSN: 1460-2075</identifier><identifier>EISSN: 1460-2075</identifier><identifier>DOI: 10.1093/emboj/16.24.7444</identifier><identifier>PMID: 9405373</identifier><language>eng</language><publisher>Chichester, UK: John Wiley & Sons, Ltd</publisher><subject>cisplatin ; Cisplatin - toxicity ; Computer Simulation ; Crystallography, X-Ray ; DNA - chemistry ; DNA - drug effects ; DNA - radiation effects ; DNA Damage ; DNA repair ; HeLa Cells ; Humans ; Life Sciences ; Models, Molecular ; Nucleic Acid Conformation ; Protein Conformation ; TATA Box ; TBP ; TFIID ; Transcription Factor TFIID ; Transcription Factors, TFII - chemistry ; Transcription Factors, TFII - metabolism ; Transcription, Genetic ; Ultraviolet Rays ; UV irradiation</subject><ispartof>The EMBO journal, 1997-12, Vol.16 (24), p.7444-7456</ispartof><rights>Copyright © 1997 European Molecular Biology Organization</rights><rights>Distributed under a Creative Commons Attribution 4.0 International License</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c5441-5703c87f9238a1b12ffafd5e19ce3d51093b264d333f445b464123149390e1de3</citedby><orcidid>0000-0002-5620-8519</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC1170344/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC1170344/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,727,780,784,885,1416,1432,27922,27923,45572,45573,46407,46831,53789,53791</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/9405373$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://hal.science/hal-03564913$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Vichi, Paul</creatorcontrib><creatorcontrib>Coin, Frédéric</creatorcontrib><creatorcontrib>Renaud, Jean-Paul</creatorcontrib><creatorcontrib>Vermeulen, Wim</creatorcontrib><creatorcontrib>Hoeijmakers, J.H.J</creatorcontrib><creatorcontrib>Moras, Dino</creatorcontrib><creatorcontrib>Egly, Jean-Marc</creatorcontrib><title>Cisplatin- and UV-damaged DNA lure the basal transcription factor TFIID/TBP</title><title>The EMBO journal</title><addtitle>EMBO J</addtitle><description>A connection between transcription and DNA repair was demonstrated previously through the characterization of TFIIH. Using filter binding as well as in vitro transcription challenge competition assays, we now show that the promoter recognition factor TATA box‐binding protein (TBP)/TFIID binds selectively to and is sequestered by cisplatin‐ or UV‐damaged DNA, either alone or in the context of a larger protein complex including TFIIH. Computer‐assisted 3D structural analysis reveals a remarkable similarity between the structure of the TATA box as found in its TBP complex and that of either platinated or UV‐damaged oligonucleotides. Thus, cisplatin‐treated or UV‐irradiated DNA could be used as a competing binding site which may lure TBP/TFIID away from its normal promoter sequence, partially explaining the phenomenon of DNA damage‐induced inhibition of RNA synthesis. Consistent with an involvement of damaged DNA‐specific binding of TBP in inhibiting transcription, we find that microinjection of additional TBP in living human fibroblasts alleviates the reduction in RNA synthesis after UV irradiation. Future anticancer drugs could be designed with the consideration of lesion recognition by TBP and their ability to reduce transcription.</description><subject>cisplatin</subject><subject>Cisplatin - toxicity</subject><subject>Computer Simulation</subject><subject>Crystallography, X-Ray</subject><subject>DNA - chemistry</subject><subject>DNA - drug effects</subject><subject>DNA - radiation effects</subject><subject>DNA Damage</subject><subject>DNA repair</subject><subject>HeLa Cells</subject><subject>Humans</subject><subject>Life Sciences</subject><subject>Models, Molecular</subject><subject>Nucleic Acid Conformation</subject><subject>Protein Conformation</subject><subject>TATA Box</subject><subject>TBP</subject><subject>TFIID</subject><subject>Transcription Factor TFIID</subject><subject>Transcription Factors, TFII - chemistry</subject><subject>Transcription Factors, TFII - metabolism</subject><subject>Transcription, Genetic</subject><subject>Ultraviolet Rays</subject><subject>UV irradiation</subject><issn>0261-4189</issn><issn>1460-2075</issn><issn>1460-2075</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1997</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkc1vEzEQxVcIVELhzgVpT0g9bOKxx3Z8QUrTNg2EUqG0PVreXW_jsh_B3hT637PLRhFw4WTJb35v5ulF0VsgYyCKTWyVNg8TEGOKY4mIz6IRoCAJJZI_j0aECkgQpupl9CqEB0IIn0o4io4UEs4kG0Wf5i5sS9O6OolNncc3t0luKnNv8_jsahaXO2_jdmPj1ARTxq03dci827auqePCZG3j4_XFcnk2WZ9ev45eFKYM9s3-PY5uLs7X88tk9WWxnM9WScYRIeGSsGwqC0XZ1EAKtChMkXMLKrMs532ulArMGWMFIk9RIFAGqJgiFnLLjqMPg-92l1Y2z2zd3VXqrXeV8U-6MU7_rdRuo--bRw3QrUbsDE4Gg80_2OVspfs_wrhABewRutn3-2W--b6zodWVC5ktS1PbZhc0CCbElLJukAyDmW9C8LY4OAPRfSj9u6wO0BR1X1aHvPszyAHYt9PpatB_uNI-_ddPn38-_Si5IhL6u5OBdaG1Pw-s8d-0kExyfXe10LfXX-liTlDfsV_QiK9N</recordid><startdate>19971215</startdate><enddate>19971215</enddate><creator>Vichi, Paul</creator><creator>Coin, Frédéric</creator><creator>Renaud, Jean-Paul</creator><creator>Vermeulen, Wim</creator><creator>Hoeijmakers, J.H.J</creator><creator>Moras, Dino</creator><creator>Egly, Jean-Marc</creator><general>John Wiley & Sons, Ltd</general><general>EMBO Press</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7TM</scope><scope>1XC</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0002-5620-8519</orcidid></search><sort><creationdate>19971215</creationdate><title>Cisplatin- and UV-damaged DNA lure the basal transcription factor TFIID/TBP</title><author>Vichi, Paul ; Coin, Frédéric ; Renaud, Jean-Paul ; Vermeulen, Wim ; Hoeijmakers, J.H.J ; Moras, Dino ; Egly, Jean-Marc</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5441-5703c87f9238a1b12ffafd5e19ce3d51093b264d333f445b464123149390e1de3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1997</creationdate><topic>cisplatin</topic><topic>Cisplatin - toxicity</topic><topic>Computer Simulation</topic><topic>Crystallography, X-Ray</topic><topic>DNA - chemistry</topic><topic>DNA - drug effects</topic><topic>DNA - radiation effects</topic><topic>DNA Damage</topic><topic>DNA repair</topic><topic>HeLa Cells</topic><topic>Humans</topic><topic>Life Sciences</topic><topic>Models, Molecular</topic><topic>Nucleic Acid Conformation</topic><topic>Protein Conformation</topic><topic>TATA Box</topic><topic>TBP</topic><topic>TFIID</topic><topic>Transcription Factor TFIID</topic><topic>Transcription Factors, TFII - chemistry</topic><topic>Transcription Factors, TFII - metabolism</topic><topic>Transcription, Genetic</topic><topic>Ultraviolet Rays</topic><topic>UV irradiation</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Vichi, Paul</creatorcontrib><creatorcontrib>Coin, Frédéric</creatorcontrib><creatorcontrib>Renaud, Jean-Paul</creatorcontrib><creatorcontrib>Vermeulen, Wim</creatorcontrib><creatorcontrib>Hoeijmakers, J.H.J</creatorcontrib><creatorcontrib>Moras, Dino</creatorcontrib><creatorcontrib>Egly, Jean-Marc</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Nucleic Acids Abstracts</collection><collection>Hyper Article en Ligne (HAL)</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>The EMBO journal</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Vichi, Paul</au><au>Coin, Frédéric</au><au>Renaud, Jean-Paul</au><au>Vermeulen, Wim</au><au>Hoeijmakers, J.H.J</au><au>Moras, Dino</au><au>Egly, Jean-Marc</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Cisplatin- and UV-damaged DNA lure the basal transcription factor TFIID/TBP</atitle><jtitle>The EMBO journal</jtitle><addtitle>EMBO J</addtitle><date>1997-12-15</date><risdate>1997</risdate><volume>16</volume><issue>24</issue><spage>7444</spage><epage>7456</epage><pages>7444-7456</pages><issn>0261-4189</issn><issn>1460-2075</issn><eissn>1460-2075</eissn><abstract>A connection between transcription and DNA repair was demonstrated previously through the characterization of TFIIH. Using filter binding as well as in vitro transcription challenge competition assays, we now show that the promoter recognition factor TATA box‐binding protein (TBP)/TFIID binds selectively to and is sequestered by cisplatin‐ or UV‐damaged DNA, either alone or in the context of a larger protein complex including TFIIH. Computer‐assisted 3D structural analysis reveals a remarkable similarity between the structure of the TATA box as found in its TBP complex and that of either platinated or UV‐damaged oligonucleotides. Thus, cisplatin‐treated or UV‐irradiated DNA could be used as a competing binding site which may lure TBP/TFIID away from its normal promoter sequence, partially explaining the phenomenon of DNA damage‐induced inhibition of RNA synthesis. Consistent with an involvement of damaged DNA‐specific binding of TBP in inhibiting transcription, we find that microinjection of additional TBP in living human fibroblasts alleviates the reduction in RNA synthesis after UV irradiation. Future anticancer drugs could be designed with the consideration of lesion recognition by TBP and their ability to reduce transcription.</abstract><cop>Chichester, UK</cop><pub>John Wiley & Sons, Ltd</pub><pmid>9405373</pmid><doi>10.1093/emboj/16.24.7444</doi><tpages>13</tpages><orcidid>https://orcid.org/0000-0002-5620-8519</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | cisplatin Cisplatin - toxicity Computer Simulation Crystallography, X-Ray DNA - chemistry DNA - drug effects DNA - radiation effects DNA Damage DNA repair HeLa Cells Humans Life Sciences Models, Molecular Nucleic Acid Conformation Protein Conformation TATA Box TBP TFIID Transcription Factor TFIID Transcription Factors, TFII - chemistry Transcription Factors, TFII - metabolism Transcription, Genetic Ultraviolet Rays UV irradiation |
title | Cisplatin- and UV-damaged DNA lure the basal transcription factor TFIID/TBP |
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