A PCR-Based Approach for Early Diagnosis of Head and Neck Aspergillosis: A Pilot Study
Aspergillosis is a fungal disease caused by the inhalation of fungal spores of the genus spp. This fungus mainly affects the lungs but can spread and infect the maxillofacial region through the bloodstream or inoculation of the fungus after extraction or endodontic treatment, especially in the upper...
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description | Aspergillosis is a fungal disease caused by the inhalation of fungal spores of the genus
spp. This fungus mainly affects the lungs but can spread and infect the maxillofacial region through the bloodstream or inoculation of the fungus after extraction or endodontic treatment, especially in the upper posterior teeth. The disease has nonspecific clinical manifestations that hinder its early diagnosis. Although the Polymerase Chain Reaction (PCR) technique holds promise as a diagnostic tool for aspergillosis, anatomopathological analysis services do not routinely adopt this method.
Therefore, the present study aimed to evaluate the applicability of PCR and standardise the techniques of preparation of biological samples for the detection of the three species:
,
and
Methods: Six samples of formalin-fixed, paraffin-embedded tissue (FFPE) with a histopathological diagnosis suggestive of aspergillosis were investigated using PCR. As a positive control for the PCR reaction, morphologically and genetically characterized cultures were used, with their sequences deposited at NCBI under accession codes MW837777 (
) and MW837779 (
). The
culture used is reference RC 2053.
Four of the six samples evaluated were positive for
spp., of which one was co-infected with
and
species, while two others were positive only for
, and one sample was positive only for
.
.
These findings suggest that PCR can be used as an auxiliary method for diagnosing aspergillosis. However, this was a pilot study, and expansion of the sample size and the evaluation of PCR in comparison with other diagnostic tests for aspergillosis are essential to determine the accuracy of the method. |
doi_str_mv | 10.3390/genes15111428 |
format | Article |
fullrecord | <record><control><sourceid>gale_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_11594221</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><galeid>A818205246</galeid><sourcerecordid>A818205246</sourcerecordid><originalsourceid>FETCH-LOGICAL-c330t-e66e1f5e8e2daf88cb08a82cc9e00b2d99dcae1a54bdf47d5f010d3643a8b8523</originalsourceid><addsrcrecordid>eNptks1vFCEUwCdGY5vao1dD4sXLtHzOMl7MuNbWpFHj15Uw8JhSZ2GEGZP972VtrV0jHCC83_uRB6-qnhJ8wliLTwcIkIkghHAqH1SHFK9YzTkVD-_tD6rjnK9xGRxTjMXj6oC1om0aKg-rbx36uP5Uv9YZLOqmKUVtrpCLCZ3pNG7RG6-HELPPKDp0AdoiHSx6D-Y76vIEafDjuAu_REXkxzijz_Nit0-qR06PGY5v16Pq69uzL-uL-vLD-bt1d1kbxvBcQ9MAcQIkUKudlKbHUktqTAsY99S2rTUaiBa8t46vrHCYYMsazrTspaDsqHp1452WfgPWQJiTHtWU_EanrYraq_1I8FdqiD8VIaLllJJieHFrSPHHAnlWG58NjKMOEJesGGGMi5WksqDP_0Gv45JCqe83hTETnP2lBj2C8sHFcrHZSVUniaRYUN4U6uQ_VJkWNt7EAM6X872E-ibBpJhzAndXJMFq1wxqrxkK_-z-y9zRf76e_QJgi62J</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>3133003543</pqid></control><display><type>article</type><title>A PCR-Based Approach for Early Diagnosis of Head and Neck Aspergillosis: A Pilot Study</title><source>MDPI - Multidisciplinary Digital Publishing Institute</source><source>MEDLINE</source><source>EZB-FREE-00999 freely available EZB journals</source><source>PubMed Central</source><source>PubMed Central Open Access</source><creator>Gomes, Thaís Ellen Chaves ; Bastos, Victor Coutinho ; Boniek, Douglas ; Romañach, Mário ; Rocha, Fernanda Faria ; Chaves, Roberta Rayra Martins ; Gomez, Ricardo Santiago</creator><creatorcontrib>Gomes, Thaís Ellen Chaves ; Bastos, Victor Coutinho ; Boniek, Douglas ; Romañach, Mário ; Rocha, Fernanda Faria ; Chaves, Roberta Rayra Martins ; Gomez, Ricardo Santiago</creatorcontrib><description>Aspergillosis is a fungal disease caused by the inhalation of fungal spores of the genus
spp. This fungus mainly affects the lungs but can spread and infect the maxillofacial region through the bloodstream or inoculation of the fungus after extraction or endodontic treatment, especially in the upper posterior teeth. The disease has nonspecific clinical manifestations that hinder its early diagnosis. Although the Polymerase Chain Reaction (PCR) technique holds promise as a diagnostic tool for aspergillosis, anatomopathological analysis services do not routinely adopt this method.
Therefore, the present study aimed to evaluate the applicability of PCR and standardise the techniques of preparation of biological samples for the detection of the three species:
,
and
Methods: Six samples of formalin-fixed, paraffin-embedded tissue (FFPE) with a histopathological diagnosis suggestive of aspergillosis were investigated using PCR. As a positive control for the PCR reaction, morphologically and genetically characterized cultures were used, with their sequences deposited at NCBI under accession codes MW837777 (
) and MW837779 (
). The
culture used is reference RC 2053.
Four of the six samples evaluated were positive for
spp., of which one was co-infected with
and
species, while two others were positive only for
, and one sample was positive only for
.
.
These findings suggest that PCR can be used as an auxiliary method for diagnosing aspergillosis. However, this was a pilot study, and expansion of the sample size and the evaluation of PCR in comparison with other diagnostic tests for aspergillosis are essential to determine the accuracy of the method.</description><identifier>ISSN: 2073-4425</identifier><identifier>EISSN: 2073-4425</identifier><identifier>DOI: 10.3390/genes15111428</identifier><identifier>PMID: 39596628</identifier><language>eng</language><publisher>Switzerland: MDPI AG</publisher><subject>Aspergillosis ; Aspergillosis - diagnosis ; Aspergillosis - microbiology ; Aspergillus ; Aspergillus - genetics ; Aspergillus - isolation & purification ; Aspergillus flavus - genetics ; Aspergillus flavus - isolation & purification ; Aspergillus flavus - pathogenicity ; Aspergillus fumigatus - genetics ; Aspergillus fumigatus - isolation & purification ; Aspergillus fumigatus - pathogenicity ; Aspergillus niger - genetics ; Aspergillus niger - isolation & purification ; Dentistry ; Diagnosis ; Early Diagnosis ; Fungi ; Humans ; Hyperplasia ; Immunocompetence ; Infections ; Inhalation ; Inoculation ; Lung diseases ; Maxillofacial ; Microorganisms ; Neck - microbiology ; Pilot Projects ; Polymerase chain reaction ; Polymerase Chain Reaction - methods ; Root canals</subject><ispartof>Genes, 2024-10, Vol.15 (11), p.1428</ispartof><rights>COPYRIGHT 2024 MDPI AG</rights><rights>2024 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2024 by the authors. 2024</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c330t-e66e1f5e8e2daf88cb08a82cc9e00b2d99dcae1a54bdf47d5f010d3643a8b8523</cites><orcidid>0000-0002-7853-5916 ; 0000-0001-6923-7143 ; 0000-0003-0360-4179 ; 0000-0001-8770-8009 ; 0009-0002-7798-4354 ; 0000-0002-1102-9672</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC11594221/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC11594221/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,27901,27902,53766,53768</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/39596628$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Gomes, Thaís Ellen Chaves</creatorcontrib><creatorcontrib>Bastos, Victor Coutinho</creatorcontrib><creatorcontrib>Boniek, Douglas</creatorcontrib><creatorcontrib>Romañach, Mário</creatorcontrib><creatorcontrib>Rocha, Fernanda Faria</creatorcontrib><creatorcontrib>Chaves, Roberta Rayra Martins</creatorcontrib><creatorcontrib>Gomez, Ricardo Santiago</creatorcontrib><title>A PCR-Based Approach for Early Diagnosis of Head and Neck Aspergillosis: A Pilot Study</title><title>Genes</title><addtitle>Genes (Basel)</addtitle><description>Aspergillosis is a fungal disease caused by the inhalation of fungal spores of the genus
spp. This fungus mainly affects the lungs but can spread and infect the maxillofacial region through the bloodstream or inoculation of the fungus after extraction or endodontic treatment, especially in the upper posterior teeth. The disease has nonspecific clinical manifestations that hinder its early diagnosis. Although the Polymerase Chain Reaction (PCR) technique holds promise as a diagnostic tool for aspergillosis, anatomopathological analysis services do not routinely adopt this method.
Therefore, the present study aimed to evaluate the applicability of PCR and standardise the techniques of preparation of biological samples for the detection of the three species:
,
and
Methods: Six samples of formalin-fixed, paraffin-embedded tissue (FFPE) with a histopathological diagnosis suggestive of aspergillosis were investigated using PCR. As a positive control for the PCR reaction, morphologically and genetically characterized cultures were used, with their sequences deposited at NCBI under accession codes MW837777 (
) and MW837779 (
). The
culture used is reference RC 2053.
Four of the six samples evaluated were positive for
spp., of which one was co-infected with
and
species, while two others were positive only for
, and one sample was positive only for
.
.
These findings suggest that PCR can be used as an auxiliary method for diagnosing aspergillosis. However, this was a pilot study, and expansion of the sample size and the evaluation of PCR in comparison with other diagnostic tests for aspergillosis are essential to determine the accuracy of the method.</description><subject>Aspergillosis</subject><subject>Aspergillosis - diagnosis</subject><subject>Aspergillosis - microbiology</subject><subject>Aspergillus</subject><subject>Aspergillus - genetics</subject><subject>Aspergillus - isolation & purification</subject><subject>Aspergillus flavus - genetics</subject><subject>Aspergillus flavus - isolation & purification</subject><subject>Aspergillus flavus - pathogenicity</subject><subject>Aspergillus fumigatus - genetics</subject><subject>Aspergillus fumigatus - isolation & purification</subject><subject>Aspergillus fumigatus - pathogenicity</subject><subject>Aspergillus niger - genetics</subject><subject>Aspergillus niger - isolation & purification</subject><subject>Dentistry</subject><subject>Diagnosis</subject><subject>Early Diagnosis</subject><subject>Fungi</subject><subject>Humans</subject><subject>Hyperplasia</subject><subject>Immunocompetence</subject><subject>Infections</subject><subject>Inhalation</subject><subject>Inoculation</subject><subject>Lung diseases</subject><subject>Maxillofacial</subject><subject>Microorganisms</subject><subject>Neck - microbiology</subject><subject>Pilot Projects</subject><subject>Polymerase chain reaction</subject><subject>Polymerase Chain Reaction - methods</subject><subject>Root canals</subject><issn>2073-4425</issn><issn>2073-4425</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><recordid>eNptks1vFCEUwCdGY5vao1dD4sXLtHzOMl7MuNbWpFHj15Uw8JhSZ2GEGZP972VtrV0jHCC83_uRB6-qnhJ8wliLTwcIkIkghHAqH1SHFK9YzTkVD-_tD6rjnK9xGRxTjMXj6oC1om0aKg-rbx36uP5Uv9YZLOqmKUVtrpCLCZ3pNG7RG6-HELPPKDp0AdoiHSx6D-Y76vIEafDjuAu_REXkxzijz_Nit0-qR06PGY5v16Pq69uzL-uL-vLD-bt1d1kbxvBcQ9MAcQIkUKudlKbHUktqTAsY99S2rTUaiBa8t46vrHCYYMsazrTspaDsqHp1452WfgPWQJiTHtWU_EanrYraq_1I8FdqiD8VIaLllJJieHFrSPHHAnlWG58NjKMOEJesGGGMi5WksqDP_0Gv45JCqe83hTETnP2lBj2C8sHFcrHZSVUniaRYUN4U6uQ_VJkWNt7EAM6X872E-ibBpJhzAndXJMFq1wxqrxkK_-z-y9zRf76e_QJgi62J</recordid><startdate>20241031</startdate><enddate>20241031</enddate><creator>Gomes, Thaís Ellen Chaves</creator><creator>Bastos, Victor Coutinho</creator><creator>Boniek, Douglas</creator><creator>Romañach, Mário</creator><creator>Rocha, Fernanda Faria</creator><creator>Chaves, Roberta Rayra Martins</creator><creator>Gomez, Ricardo Santiago</creator><general>MDPI AG</general><general>MDPI</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>COVID</scope><scope>DWQXO</scope><scope>FR3</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>LK8</scope><scope>M7P</scope><scope>P64</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0002-7853-5916</orcidid><orcidid>https://orcid.org/0000-0001-6923-7143</orcidid><orcidid>https://orcid.org/0000-0003-0360-4179</orcidid><orcidid>https://orcid.org/0000-0001-8770-8009</orcidid><orcidid>https://orcid.org/0009-0002-7798-4354</orcidid><orcidid>https://orcid.org/0000-0002-1102-9672</orcidid></search><sort><creationdate>20241031</creationdate><title>A PCR-Based Approach for Early Diagnosis of Head and Neck Aspergillosis: A Pilot Study</title><author>Gomes, Thaís Ellen Chaves ; 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spp. This fungus mainly affects the lungs but can spread and infect the maxillofacial region through the bloodstream or inoculation of the fungus after extraction or endodontic treatment, especially in the upper posterior teeth. The disease has nonspecific clinical manifestations that hinder its early diagnosis. Although the Polymerase Chain Reaction (PCR) technique holds promise as a diagnostic tool for aspergillosis, anatomopathological analysis services do not routinely adopt this method.
Therefore, the present study aimed to evaluate the applicability of PCR and standardise the techniques of preparation of biological samples for the detection of the three species:
,
and
Methods: Six samples of formalin-fixed, paraffin-embedded tissue (FFPE) with a histopathological diagnosis suggestive of aspergillosis were investigated using PCR. As a positive control for the PCR reaction, morphologically and genetically characterized cultures were used, with their sequences deposited at NCBI under accession codes MW837777 (
) and MW837779 (
). The
culture used is reference RC 2053.
Four of the six samples evaluated were positive for
spp., of which one was co-infected with
and
species, while two others were positive only for
, and one sample was positive only for
.
.
These findings suggest that PCR can be used as an auxiliary method for diagnosing aspergillosis. However, this was a pilot study, and expansion of the sample size and the evaluation of PCR in comparison with other diagnostic tests for aspergillosis are essential to determine the accuracy of the method.</abstract><cop>Switzerland</cop><pub>MDPI AG</pub><pmid>39596628</pmid><doi>10.3390/genes15111428</doi><orcidid>https://orcid.org/0000-0002-7853-5916</orcidid><orcidid>https://orcid.org/0000-0001-6923-7143</orcidid><orcidid>https://orcid.org/0000-0003-0360-4179</orcidid><orcidid>https://orcid.org/0000-0001-8770-8009</orcidid><orcidid>https://orcid.org/0009-0002-7798-4354</orcidid><orcidid>https://orcid.org/0000-0002-1102-9672</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Aspergillosis Aspergillosis - diagnosis Aspergillosis - microbiology Aspergillus Aspergillus - genetics Aspergillus - isolation & purification Aspergillus flavus - genetics Aspergillus flavus - isolation & purification Aspergillus flavus - pathogenicity Aspergillus fumigatus - genetics Aspergillus fumigatus - isolation & purification Aspergillus fumigatus - pathogenicity Aspergillus niger - genetics Aspergillus niger - isolation & purification Dentistry Diagnosis Early Diagnosis Fungi Humans Hyperplasia Immunocompetence Infections Inhalation Inoculation Lung diseases Maxillofacial Microorganisms Neck - microbiology Pilot Projects Polymerase chain reaction Polymerase Chain Reaction - methods Root canals |
title | A PCR-Based Approach for Early Diagnosis of Head and Neck Aspergillosis: A Pilot Study |
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