Lifespan Extension by Retrotransposons under Conditions of Mild Stress Requires Genes Involved in tRNA Modifications and Nucleotide Metabolism
Retrotransposons are mobile DNA elements that are more active with increasing age and exacerbate aging phenotypes in multiple species. We previously reported an unexpected extension of chronological lifespan in the yeast, , due to the presence of Ty1 retrotransposons when cells were aged under condi...
Gespeichert in:
Veröffentlicht in: | International journal of molecular sciences 2024-10, Vol.25 (19), p.10593 |
---|---|
Hauptverfasser: | , , , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | |
---|---|
container_issue | 19 |
container_start_page | 10593 |
container_title | International journal of molecular sciences |
container_volume | 25 |
creator | Maxwell, Patrick H Mahmood, Mustafa Villanueva, Maya Devine, Kaitlyn Avery, Nina |
description | Retrotransposons are mobile DNA elements that are more active with increasing age and exacerbate aging phenotypes in multiple species. We previously reported an unexpected extension of chronological lifespan in the yeast,
, due to the presence of Ty1 retrotransposons when cells were aged under conditions of mild stress. In this study, we tested a subset of genes identified by RNA-seq to be differentially expressed in
strains with a high-copy number of Ty1 retrotransposons compared with a strain with no retrotransposons and additional candidate genes for their contribution to lifespan extension when cells were exposed to a moderate dose of hydroxyurea (HU). Deletion of
,
, or
prevented lifespan extension, while deletion of
,
, or
partially prevented lifespan extension. Genes overexpressed in high-copy Ty1 strains did not typically have Ty1 insertions in their promoter regions. We found that silencing genomic copies of Ty1 prevented lifespan extension, while expression of Ty1 from a high-copy plasmid extended lifespan in medium with HU or synthetic medium. These results indicate that cells adapt to expression of retrotransposons by changing gene expression in a manner that can better prepare them to remain healthy under mild stress. |
doi_str_mv | 10.3390/ijms251910593 |
format | Article |
fullrecord | <record><control><sourceid>gale_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_11477299</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><galeid>A812614624</galeid><sourcerecordid>A812614624</sourcerecordid><originalsourceid>FETCH-LOGICAL-c369t-918a8662649121b22b6a7b808f7f3a47bc81ff43b2c5d87a63e72af601d5e6003</originalsourceid><addsrcrecordid>eNptkk1r3DAQhk1padK0x16LoJdcnOrDlqxTWZY0DeymkLZnIUujVIstbSx7af5EfnNkNk2zpQhGw-h5X5jRFMV7gs8Yk_iT3_SJ1kQSXEv2ojgmFaUlxly8fJYfFW9S2mBMGa3l6-KIyQo3ktLj4n7lHaStDuj89wgh-RhQe4euYRziOOiQtjHFkNAULAxoGYP1o58L0aG17yz6Pg6QUhbcTj5n6AJCjpdhF7sdWOQDGq-vFmgdrXfe6L1YB4uuJtNBHL0FtIZRt7HzqX9bvHK6S_Du8T4pfn45_7H8Wq6-XVwuF6vSMC7HUpJGN5xTXklCSUtpy7VoG9w44ZiuRGsa4lzFWmpq2wjNGQiqHcfE1sAxZifF573vdmp7sAZCbrZT28H3erhTUXt1-BL8L3UTd4qQSggqZXY4fXQY4u0EaVS9Twa6TgeIU1KMEIEFZ3WV0Y__oJs4DSH3N1Oc8_wZzV_qRnegfHDz_M1sqhYNoZxUnM5eZ_-h8rHQexMDOJ_rB4JyLzBDTGkA99QkwWreIHWwQZn_8HwyT_SflWEPK_PCuA</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>3116664088</pqid></control><display><type>article</type><title>Lifespan Extension by Retrotransposons under Conditions of Mild Stress Requires Genes Involved in tRNA Modifications and Nucleotide Metabolism</title><source>MEDLINE</source><source>MDPI - Multidisciplinary Digital Publishing Institute</source><source>EZB-FREE-00999 freely available EZB journals</source><source>PubMed Central</source><creator>Maxwell, Patrick H ; Mahmood, Mustafa ; Villanueva, Maya ; Devine, Kaitlyn ; Avery, Nina</creator><creatorcontrib>Maxwell, Patrick H ; Mahmood, Mustafa ; Villanueva, Maya ; Devine, Kaitlyn ; Avery, Nina</creatorcontrib><description>Retrotransposons are mobile DNA elements that are more active with increasing age and exacerbate aging phenotypes in multiple species. We previously reported an unexpected extension of chronological lifespan in the yeast,
, due to the presence of Ty1 retrotransposons when cells were aged under conditions of mild stress. In this study, we tested a subset of genes identified by RNA-seq to be differentially expressed in
strains with a high-copy number of Ty1 retrotransposons compared with a strain with no retrotransposons and additional candidate genes for their contribution to lifespan extension when cells were exposed to a moderate dose of hydroxyurea (HU). Deletion of
,
, or
prevented lifespan extension, while deletion of
,
, or
partially prevented lifespan extension. Genes overexpressed in high-copy Ty1 strains did not typically have Ty1 insertions in their promoter regions. We found that silencing genomic copies of Ty1 prevented lifespan extension, while expression of Ty1 from a high-copy plasmid extended lifespan in medium with HU or synthetic medium. These results indicate that cells adapt to expression of retrotransposons by changing gene expression in a manner that can better prepare them to remain healthy under mild stress.</description><identifier>ISSN: 1422-0067</identifier><identifier>ISSN: 1661-6596</identifier><identifier>EISSN: 1422-0067</identifier><identifier>DOI: 10.3390/ijms251910593</identifier><identifier>PMID: 39408922</identifier><language>eng</language><publisher>Switzerland: MDPI AG</publisher><subject>Aging ; Autophagy ; Gene Expression Regulation, Fungal ; Genes ; Genetic aspects ; Genetic transcription ; Health aspects ; Hydroxyurea - pharmacology ; Longevity ; Macular degeneration ; Metabolism ; Nucleotides - genetics ; Nucleotides - metabolism ; Physiological aspects ; Proteins ; Retroelements - genetics ; Retrotransposons ; RNA, Transfer - genetics ; RNA, Transfer - metabolism ; Saccharomyces - genetics ; Saccharomyces - metabolism ; Stem cells ; Stress (Physiology) ; Stress, Physiological - genetics ; Transfer RNA ; Transposons ; Yeast</subject><ispartof>International journal of molecular sciences, 2024-10, Vol.25 (19), p.10593</ispartof><rights>COPYRIGHT 2024 MDPI AG</rights><rights>2024 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2024 by the authors. 2024</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c369t-918a8662649121b22b6a7b808f7f3a47bc81ff43b2c5d87a63e72af601d5e6003</cites><orcidid>0009-0008-6537-5213</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC11477299/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC11477299/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,27903,27904,53770,53772</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/39408922$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Maxwell, Patrick H</creatorcontrib><creatorcontrib>Mahmood, Mustafa</creatorcontrib><creatorcontrib>Villanueva, Maya</creatorcontrib><creatorcontrib>Devine, Kaitlyn</creatorcontrib><creatorcontrib>Avery, Nina</creatorcontrib><title>Lifespan Extension by Retrotransposons under Conditions of Mild Stress Requires Genes Involved in tRNA Modifications and Nucleotide Metabolism</title><title>International journal of molecular sciences</title><addtitle>Int J Mol Sci</addtitle><description>Retrotransposons are mobile DNA elements that are more active with increasing age and exacerbate aging phenotypes in multiple species. We previously reported an unexpected extension of chronological lifespan in the yeast,
, due to the presence of Ty1 retrotransposons when cells were aged under conditions of mild stress. In this study, we tested a subset of genes identified by RNA-seq to be differentially expressed in
strains with a high-copy number of Ty1 retrotransposons compared with a strain with no retrotransposons and additional candidate genes for their contribution to lifespan extension when cells were exposed to a moderate dose of hydroxyurea (HU). Deletion of
,
, or
prevented lifespan extension, while deletion of
,
, or
partially prevented lifespan extension. Genes overexpressed in high-copy Ty1 strains did not typically have Ty1 insertions in their promoter regions. We found that silencing genomic copies of Ty1 prevented lifespan extension, while expression of Ty1 from a high-copy plasmid extended lifespan in medium with HU or synthetic medium. These results indicate that cells adapt to expression of retrotransposons by changing gene expression in a manner that can better prepare them to remain healthy under mild stress.</description><subject>Aging</subject><subject>Autophagy</subject><subject>Gene Expression Regulation, Fungal</subject><subject>Genes</subject><subject>Genetic aspects</subject><subject>Genetic transcription</subject><subject>Health aspects</subject><subject>Hydroxyurea - pharmacology</subject><subject>Longevity</subject><subject>Macular degeneration</subject><subject>Metabolism</subject><subject>Nucleotides - genetics</subject><subject>Nucleotides - metabolism</subject><subject>Physiological aspects</subject><subject>Proteins</subject><subject>Retroelements - genetics</subject><subject>Retrotransposons</subject><subject>RNA, Transfer - genetics</subject><subject>RNA, Transfer - metabolism</subject><subject>Saccharomyces - genetics</subject><subject>Saccharomyces - metabolism</subject><subject>Stem cells</subject><subject>Stress (Physiology)</subject><subject>Stress, Physiological - genetics</subject><subject>Transfer RNA</subject><subject>Transposons</subject><subject>Yeast</subject><issn>1422-0067</issn><issn>1661-6596</issn><issn>1422-0067</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>8G5</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><recordid>eNptkk1r3DAQhk1padK0x16LoJdcnOrDlqxTWZY0DeymkLZnIUujVIstbSx7af5EfnNkNk2zpQhGw-h5X5jRFMV7gs8Yk_iT3_SJ1kQSXEv2ojgmFaUlxly8fJYfFW9S2mBMGa3l6-KIyQo3ktLj4n7lHaStDuj89wgh-RhQe4euYRziOOiQtjHFkNAULAxoGYP1o58L0aG17yz6Pg6QUhbcTj5n6AJCjpdhF7sdWOQDGq-vFmgdrXfe6L1YB4uuJtNBHL0FtIZRt7HzqX9bvHK6S_Du8T4pfn45_7H8Wq6-XVwuF6vSMC7HUpJGN5xTXklCSUtpy7VoG9w44ZiuRGsa4lzFWmpq2wjNGQiqHcfE1sAxZifF573vdmp7sAZCbrZT28H3erhTUXt1-BL8L3UTd4qQSggqZXY4fXQY4u0EaVS9Twa6TgeIU1KMEIEFZ3WV0Y__oJs4DSH3N1Oc8_wZzV_qRnegfHDz_M1sqhYNoZxUnM5eZ_-h8rHQexMDOJ_rB4JyLzBDTGkA99QkwWreIHWwQZn_8HwyT_SflWEPK_PCuA</recordid><startdate>20241001</startdate><enddate>20241001</enddate><creator>Maxwell, Patrick H</creator><creator>Mahmood, Mustafa</creator><creator>Villanueva, Maya</creator><creator>Devine, Kaitlyn</creator><creator>Avery, Nina</creator><general>MDPI AG</general><general>MDPI</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>K9.</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>MBDVC</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>Q9U</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0009-0008-6537-5213</orcidid></search><sort><creationdate>20241001</creationdate><title>Lifespan Extension by Retrotransposons under Conditions of Mild Stress Requires Genes Involved in tRNA Modifications and Nucleotide Metabolism</title><author>Maxwell, Patrick H ; Mahmood, Mustafa ; Villanueva, Maya ; Devine, Kaitlyn ; Avery, Nina</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c369t-918a8662649121b22b6a7b808f7f3a47bc81ff43b2c5d87a63e72af601d5e6003</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Aging</topic><topic>Autophagy</topic><topic>Gene Expression Regulation, Fungal</topic><topic>Genes</topic><topic>Genetic aspects</topic><topic>Genetic transcription</topic><topic>Health aspects</topic><topic>Hydroxyurea - pharmacology</topic><topic>Longevity</topic><topic>Macular degeneration</topic><topic>Metabolism</topic><topic>Nucleotides - genetics</topic><topic>Nucleotides - metabolism</topic><topic>Physiological aspects</topic><topic>Proteins</topic><topic>Retroelements - genetics</topic><topic>Retrotransposons</topic><topic>RNA, Transfer - genetics</topic><topic>RNA, Transfer - metabolism</topic><topic>Saccharomyces - genetics</topic><topic>Saccharomyces - metabolism</topic><topic>Stem cells</topic><topic>Stress (Physiology)</topic><topic>Stress, Physiological - genetics</topic><topic>Transfer RNA</topic><topic>Transposons</topic><topic>Yeast</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Maxwell, Patrick H</creatorcontrib><creatorcontrib>Mahmood, Mustafa</creatorcontrib><creatorcontrib>Villanueva, Maya</creatorcontrib><creatorcontrib>Devine, Kaitlyn</creatorcontrib><creatorcontrib>Avery, Nina</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Research Library</collection><collection>Research Library (Corporate)</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>ProQuest Central Basic</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>International journal of molecular sciences</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Maxwell, Patrick H</au><au>Mahmood, Mustafa</au><au>Villanueva, Maya</au><au>Devine, Kaitlyn</au><au>Avery, Nina</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Lifespan Extension by Retrotransposons under Conditions of Mild Stress Requires Genes Involved in tRNA Modifications and Nucleotide Metabolism</atitle><jtitle>International journal of molecular sciences</jtitle><addtitle>Int J Mol Sci</addtitle><date>2024-10-01</date><risdate>2024</risdate><volume>25</volume><issue>19</issue><spage>10593</spage><pages>10593-</pages><issn>1422-0067</issn><issn>1661-6596</issn><eissn>1422-0067</eissn><abstract>Retrotransposons are mobile DNA elements that are more active with increasing age and exacerbate aging phenotypes in multiple species. We previously reported an unexpected extension of chronological lifespan in the yeast,
, due to the presence of Ty1 retrotransposons when cells were aged under conditions of mild stress. In this study, we tested a subset of genes identified by RNA-seq to be differentially expressed in
strains with a high-copy number of Ty1 retrotransposons compared with a strain with no retrotransposons and additional candidate genes for their contribution to lifespan extension when cells were exposed to a moderate dose of hydroxyurea (HU). Deletion of
,
, or
prevented lifespan extension, while deletion of
,
, or
partially prevented lifespan extension. Genes overexpressed in high-copy Ty1 strains did not typically have Ty1 insertions in their promoter regions. We found that silencing genomic copies of Ty1 prevented lifespan extension, while expression of Ty1 from a high-copy plasmid extended lifespan in medium with HU or synthetic medium. These results indicate that cells adapt to expression of retrotransposons by changing gene expression in a manner that can better prepare them to remain healthy under mild stress.</abstract><cop>Switzerland</cop><pub>MDPI AG</pub><pmid>39408922</pmid><doi>10.3390/ijms251910593</doi><orcidid>https://orcid.org/0009-0008-6537-5213</orcidid><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 1422-0067 |
ispartof | International journal of molecular sciences, 2024-10, Vol.25 (19), p.10593 |
issn | 1422-0067 1661-6596 1422-0067 |
language | eng |
recordid | cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_11477299 |
source | MEDLINE; MDPI - Multidisciplinary Digital Publishing Institute; EZB-FREE-00999 freely available EZB journals; PubMed Central |
subjects | Aging Autophagy Gene Expression Regulation, Fungal Genes Genetic aspects Genetic transcription Health aspects Hydroxyurea - pharmacology Longevity Macular degeneration Metabolism Nucleotides - genetics Nucleotides - metabolism Physiological aspects Proteins Retroelements - genetics Retrotransposons RNA, Transfer - genetics RNA, Transfer - metabolism Saccharomyces - genetics Saccharomyces - metabolism Stem cells Stress (Physiology) Stress, Physiological - genetics Transfer RNA Transposons Yeast |
title | Lifespan Extension by Retrotransposons under Conditions of Mild Stress Requires Genes Involved in tRNA Modifications and Nucleotide Metabolism |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-22T09%3A15%3A15IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-gale_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Lifespan%20Extension%20by%20Retrotransposons%20under%20Conditions%20of%20Mild%20Stress%20Requires%20Genes%20Involved%20in%20tRNA%20Modifications%20and%20Nucleotide%20Metabolism&rft.jtitle=International%20journal%20of%20molecular%20sciences&rft.au=Maxwell,%20Patrick%20H&rft.date=2024-10-01&rft.volume=25&rft.issue=19&rft.spage=10593&rft.pages=10593-&rft.issn=1422-0067&rft.eissn=1422-0067&rft_id=info:doi/10.3390/ijms251910593&rft_dat=%3Cgale_pubme%3EA812614624%3C/gale_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=3116664088&rft_id=info:pmid/39408922&rft_galeid=A812614624&rfr_iscdi=true |