A Novel Pathogenic Large Duplication in EXT1 Identified in a Family with Multiple Osteochondromas
Multiple osteochondromas (MO) is an autosomal dominant disorder and the most common genetic skeletal dysplasia, characterized by the growth of bone outgrowths capped by cartilage, called osteochondromas. Most MO cases are caused by mutations in the exostosin-1 ( ) and exostosin-2 ( ) genes. Only 5%...
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Veröffentlicht in: | Genes 2024-09, Vol.15 (9), p.1169 |
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description | Multiple osteochondromas (MO) is an autosomal dominant disorder and the most common genetic skeletal dysplasia, characterized by the growth of bone outgrowths capped by cartilage, called osteochondromas. Most MO cases are caused by mutations in the exostosin-1 (
) and exostosin-2 (
) genes. Only 5% of MO-causative variants are represented by single or multiple exon deletions; to date, no pathogenic large duplication has been described in the literature. In the present study, we describe the novel in-tandem intragenic duplication c.(1128_1202)_(1284+29_1344)dup involving exon 4 of
(NM_000127.2), detected in a three-generation family with MO. The variant has been detected by MLPA (multiplex ligation-dependent probe amplification) and then confirmed with qPCR (quantitative PCR). Our finding expands the spectrum of MO-causing variants describing a pathogenic large duplication, underlying the importance of quantitative analysis in patients with negative sequencing. |
doi_str_mv | 10.3390/genes15091169 |
format | Article |
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) and exostosin-2 (
) genes. Only 5% of MO-causative variants are represented by single or multiple exon deletions; to date, no pathogenic large duplication has been described in the literature. In the present study, we describe the novel in-tandem intragenic duplication c.(1128_1202)_(1284+29_1344)dup involving exon 4 of
(NM_000127.2), detected in a three-generation family with MO. The variant has been detected by MLPA (multiplex ligation-dependent probe amplification) and then confirmed with qPCR (quantitative PCR). Our finding expands the spectrum of MO-causing variants describing a pathogenic large duplication, underlying the importance of quantitative analysis in patients with negative sequencing.</description><identifier>ISSN: 2073-4425</identifier><identifier>EISSN: 2073-4425</identifier><identifier>DOI: 10.3390/genes15091169</identifier><identifier>PMID: 39336760</identifier><language>eng</language><publisher>Switzerland: MDPI AG</publisher><subject>Adult ; Bone dysplasia ; Bone growth ; Case Report ; Ethylenediaminetetraacetic acid ; Exons - genetics ; Exostoses, Multiple Hereditary - genetics ; Exostoses, Multiple Hereditary - pathology ; Female ; Gene Duplication ; Genes ; Genetic disorders ; Genetic testing ; Genomics ; Heparan sulfate ; Hereditary diseases ; Humans ; Invoices ; Male ; Molecular weight ; Mutation ; N-Acetylglucosaminyltransferases - genetics ; Pedigree ; Skeleton ; Software</subject><ispartof>Genes, 2024-09, Vol.15 (9), p.1169</ispartof><rights>COPYRIGHT 2024 MDPI AG</rights><rights>2024 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2024 by the authors. 2024</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c369t-635651a4693b50ebb6a67a05220084982302e49bd86cf3cf2cf7ce49434610d3</cites><orcidid>0000-0002-5168-3599 ; 0000-0002-0880-7306 ; 0000-0001-9980-7741 ; 0009-0007-5163-0327 ; 0000-0002-4777-341X ; 0000-0002-5907-7470</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC11430977/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC11430977/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,315,729,782,786,887,27931,27932,53798,53800</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/39336760$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Bartolotti, Isabella</creatorcontrib><creatorcontrib>Sobul, Klaudia</creatorcontrib><creatorcontrib>Corsini, Serena</creatorcontrib><creatorcontrib>Scognamiglio, Davide</creatorcontrib><creatorcontrib>Moroni, Alice</creatorcontrib><creatorcontrib>Gnoli, Maria</creatorcontrib><creatorcontrib>Sangiorgi, Luca</creatorcontrib><creatorcontrib>Pedrini, Elena</creatorcontrib><title>A Novel Pathogenic Large Duplication in EXT1 Identified in a Family with Multiple Osteochondromas</title><title>Genes</title><addtitle>Genes (Basel)</addtitle><description>Multiple osteochondromas (MO) is an autosomal dominant disorder and the most common genetic skeletal dysplasia, characterized by the growth of bone outgrowths capped by cartilage, called osteochondromas. Most MO cases are caused by mutations in the exostosin-1 (
) and exostosin-2 (
) genes. Only 5% of MO-causative variants are represented by single or multiple exon deletions; to date, no pathogenic large duplication has been described in the literature. In the present study, we describe the novel in-tandem intragenic duplication c.(1128_1202)_(1284+29_1344)dup involving exon 4 of
(NM_000127.2), detected in a three-generation family with MO. The variant has been detected by MLPA (multiplex ligation-dependent probe amplification) and then confirmed with qPCR (quantitative PCR). Our finding expands the spectrum of MO-causing variants describing a pathogenic large duplication, underlying the importance of quantitative analysis in patients with negative sequencing.</description><subject>Adult</subject><subject>Bone dysplasia</subject><subject>Bone growth</subject><subject>Case Report</subject><subject>Ethylenediaminetetraacetic acid</subject><subject>Exons - genetics</subject><subject>Exostoses, Multiple Hereditary - genetics</subject><subject>Exostoses, Multiple Hereditary - pathology</subject><subject>Female</subject><subject>Gene Duplication</subject><subject>Genes</subject><subject>Genetic disorders</subject><subject>Genetic testing</subject><subject>Genomics</subject><subject>Heparan sulfate</subject><subject>Hereditary diseases</subject><subject>Humans</subject><subject>Invoices</subject><subject>Male</subject><subject>Molecular weight</subject><subject>Mutation</subject><subject>N-Acetylglucosaminyltransferases - genetics</subject><subject>Pedigree</subject><subject>Skeleton</subject><subject>Software</subject><issn>2073-4425</issn><issn>2073-4425</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNptkk1v3CAQhq2qVROlOfZaIfXSi5PBYGxO1SofbaRt08MeekMYj3eJMGzBTpV_XzZfzVaFA-jlmZeZ0RTFewonjEk4XaPHRGuQlAr5qjisoGEl51X9-sX9oDhO6Qby4lAB1G-LAyYZE42Aw0IvyPdwi4780NMmZD9ryFLHNZLzeeus0ZMNnlhPLn6uKLnq0U92sNjvJE0u9WjdHfltpw35NrvJbh2S6zRhMJvg-xhGnd4VbwbtEh4_nkfF6vJidfa1XF5_uTpbLEvDhJxKwWpRU82FZF0N2HVCi0ZDXeWUWy7bikGFXHZ9K8zAzFCZoTFZ4IwLCj07Kj4_2G7nbsTe5ESjdmob7ajjnQraqv0XbzdqHW4VpZyBbJrs8OnRIYZfM6ZJjTYZdE57DHNSjNLcaIBGZPTjP-hNmKPP5d1TvGlZ1f6l1tqhsn4I-WOzM1WLloJgAu6pk_9Qefc4WhM8DjbrewHlQ4CJIaWIw3ORFNRuLNTeWGT-w8vOPNNPQ8D-AAl7sLo</recordid><startdate>20240905</startdate><enddate>20240905</enddate><creator>Bartolotti, Isabella</creator><creator>Sobul, Klaudia</creator><creator>Corsini, Serena</creator><creator>Scognamiglio, Davide</creator><creator>Moroni, Alice</creator><creator>Gnoli, Maria</creator><creator>Sangiorgi, Luca</creator><creator>Pedrini, Elena</creator><general>MDPI AG</general><general>MDPI</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>LK8</scope><scope>M7P</scope><scope>P64</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0002-5168-3599</orcidid><orcidid>https://orcid.org/0000-0002-0880-7306</orcidid><orcidid>https://orcid.org/0000-0001-9980-7741</orcidid><orcidid>https://orcid.org/0009-0007-5163-0327</orcidid><orcidid>https://orcid.org/0000-0002-4777-341X</orcidid><orcidid>https://orcid.org/0000-0002-5907-7470</orcidid></search><sort><creationdate>20240905</creationdate><title>A Novel Pathogenic Large Duplication in EXT1 Identified in a Family with Multiple Osteochondromas</title><author>Bartolotti, Isabella ; Sobul, Klaudia ; Corsini, Serena ; Scognamiglio, Davide ; Moroni, Alice ; Gnoli, Maria ; Sangiorgi, Luca ; Pedrini, Elena</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c369t-635651a4693b50ebb6a67a05220084982302e49bd86cf3cf2cf7ce49434610d3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Adult</topic><topic>Bone dysplasia</topic><topic>Bone growth</topic><topic>Case Report</topic><topic>Ethylenediaminetetraacetic acid</topic><topic>Exons - genetics</topic><topic>Exostoses, Multiple Hereditary - genetics</topic><topic>Exostoses, Multiple Hereditary - pathology</topic><topic>Female</topic><topic>Gene Duplication</topic><topic>Genes</topic><topic>Genetic disorders</topic><topic>Genetic testing</topic><topic>Genomics</topic><topic>Heparan sulfate</topic><topic>Hereditary diseases</topic><topic>Humans</topic><topic>Invoices</topic><topic>Male</topic><topic>Molecular weight</topic><topic>Mutation</topic><topic>N-Acetylglucosaminyltransferases - genetics</topic><topic>Pedigree</topic><topic>Skeleton</topic><topic>Software</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Bartolotti, Isabella</creatorcontrib><creatorcontrib>Sobul, Klaudia</creatorcontrib><creatorcontrib>Corsini, Serena</creatorcontrib><creatorcontrib>Scognamiglio, Davide</creatorcontrib><creatorcontrib>Moroni, Alice</creatorcontrib><creatorcontrib>Gnoli, Maria</creatorcontrib><creatorcontrib>Sangiorgi, Luca</creatorcontrib><creatorcontrib>Pedrini, Elena</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Biological Science Collection</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Genes</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Bartolotti, Isabella</au><au>Sobul, Klaudia</au><au>Corsini, Serena</au><au>Scognamiglio, Davide</au><au>Moroni, Alice</au><au>Gnoli, Maria</au><au>Sangiorgi, Luca</au><au>Pedrini, Elena</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A Novel Pathogenic Large Duplication in EXT1 Identified in a Family with Multiple Osteochondromas</atitle><jtitle>Genes</jtitle><addtitle>Genes (Basel)</addtitle><date>2024-09-05</date><risdate>2024</risdate><volume>15</volume><issue>9</issue><spage>1169</spage><pages>1169-</pages><issn>2073-4425</issn><eissn>2073-4425</eissn><abstract>Multiple osteochondromas (MO) is an autosomal dominant disorder and the most common genetic skeletal dysplasia, characterized by the growth of bone outgrowths capped by cartilage, called osteochondromas. Most MO cases are caused by mutations in the exostosin-1 (
) and exostosin-2 (
) genes. Only 5% of MO-causative variants are represented by single or multiple exon deletions; to date, no pathogenic large duplication has been described in the literature. In the present study, we describe the novel in-tandem intragenic duplication c.(1128_1202)_(1284+29_1344)dup involving exon 4 of
(NM_000127.2), detected in a three-generation family with MO. The variant has been detected by MLPA (multiplex ligation-dependent probe amplification) and then confirmed with qPCR (quantitative PCR). Our finding expands the spectrum of MO-causing variants describing a pathogenic large duplication, underlying the importance of quantitative analysis in patients with negative sequencing.</abstract><cop>Switzerland</cop><pub>MDPI AG</pub><pmid>39336760</pmid><doi>10.3390/genes15091169</doi><orcidid>https://orcid.org/0000-0002-5168-3599</orcidid><orcidid>https://orcid.org/0000-0002-0880-7306</orcidid><orcidid>https://orcid.org/0000-0001-9980-7741</orcidid><orcidid>https://orcid.org/0009-0007-5163-0327</orcidid><orcidid>https://orcid.org/0000-0002-4777-341X</orcidid><orcidid>https://orcid.org/0000-0002-5907-7470</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Adult Bone dysplasia Bone growth Case Report Ethylenediaminetetraacetic acid Exons - genetics Exostoses, Multiple Hereditary - genetics Exostoses, Multiple Hereditary - pathology Female Gene Duplication Genes Genetic disorders Genetic testing Genomics Heparan sulfate Hereditary diseases Humans Invoices Male Molecular weight Mutation N-Acetylglucosaminyltransferases - genetics Pedigree Skeleton Software |
title | A Novel Pathogenic Large Duplication in EXT1 Identified in a Family with Multiple Osteochondromas |
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