A Versatile Method for Site-Specific Chemical Installation of Aromatic Posttranslational Modification Analogs into Proteins
Posttranslational modifications (PTMs) of proteins play central roles in regulating the protein structure, interactome, and functions. A notable modification site is the aromatic side chain of Tyr, which undergoes modifications such as phosphorylation and nitration. Despite the biological and physio...
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creator | Lin, Xiaoxi Mandal, Shaswati Nithun, Raj V. Kolla, Rajasekhar Bouri, Bouchra Lashuel, Hilal A. Jbara, Muhammad |
description | Posttranslational modifications (PTMs) of proteins play central roles in regulating the protein structure, interactome, and functions. A notable modification site is the aromatic side chain of Tyr, which undergoes modifications such as phosphorylation and nitration. Despite the biological and physiological importance of Tyr-PTMs, our current understanding of the mechanisms by which these modifications contribute to human health and disease remains incomplete. This knowledge gap arises from the absence of natural amino acids that can mimic these PTMs and the lack of synthetic tools for the site-specific introduction of aromatic PTMs into proteins. Herein, we describe a facile method for the site-specific chemical installation of aromatic PTMs into proteins through palladium-mediated S–C(sp2) bond formation under ambient conditions. We demonstrate the incorporation of novel PTMs such as Tyr-nitration and phosphorylation analogs to synthetic and recombinantly expressed Cys-containing peptides and proteins within minutes and in good yields. To demonstrate the versatility of our approach, we employed it to prepare 10 site-specifically modified proteins, including nitrated and phosphorylated analogs of Myc and Max proteins. Furthermore, we prepared a focused library of site-specifically nitrated and phosphorylated α–synuclein (α-Syn) protein, which enabled, for the first time, deciphering the role of these competing modifications in regulating α-Syn conformation aggregation in vitro. Our strategy offers advantages over synthetic or semisynthetic approaches, as it enables rapid and selective transfer of rarely explored aromatic PTMs into recombinant proteins, thus facilitating the generation of novel libraries of homogeneous posttranslationally modified proteins for biomarker discovery, mechanistic studies, and drug discovery. |
doi_str_mv | 10.1021/jacs.4c08416 |
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A notable modification site is the aromatic side chain of Tyr, which undergoes modifications such as phosphorylation and nitration. Despite the biological and physiological importance of Tyr-PTMs, our current understanding of the mechanisms by which these modifications contribute to human health and disease remains incomplete. This knowledge gap arises from the absence of natural amino acids that can mimic these PTMs and the lack of synthetic tools for the site-specific introduction of aromatic PTMs into proteins. Herein, we describe a facile method for the site-specific chemical installation of aromatic PTMs into proteins through palladium-mediated S–C(sp2) bond formation under ambient conditions. We demonstrate the incorporation of novel PTMs such as Tyr-nitration and phosphorylation analogs to synthetic and recombinantly expressed Cys-containing peptides and proteins within minutes and in good yields. To demonstrate the versatility of our approach, we employed it to prepare 10 site-specifically modified proteins, including nitrated and phosphorylated analogs of Myc and Max proteins. Furthermore, we prepared a focused library of site-specifically nitrated and phosphorylated α–synuclein (α-Syn) protein, which enabled, for the first time, deciphering the role of these competing modifications in regulating α-Syn conformation aggregation in vitro. Our strategy offers advantages over synthetic or semisynthetic approaches, as it enables rapid and selective transfer of rarely explored aromatic PTMs into recombinant proteins, thus facilitating the generation of novel libraries of homogeneous posttranslationally modified proteins for biomarker discovery, mechanistic studies, and drug discovery.</description><identifier>ISSN: 0002-7863</identifier><identifier>ISSN: 1520-5126</identifier><identifier>EISSN: 1520-5126</identifier><identifier>DOI: 10.1021/jacs.4c08416</identifier><identifier>PMID: 39224092</identifier><language>eng</language><publisher>United States: American Chemical Society</publisher><subject>alpha-Synuclein - chemistry ; alpha-Synuclein - metabolism ; biomarkers ; drugs ; human health ; Humans ; peptides ; Phosphorylation ; post-translational modification ; Protein Processing, Post-Translational ; protein structure ; Proteins - chemistry ; Proteins - metabolism ; Tyrosine - chemistry</subject><ispartof>Journal of the American Chemical Society, 2024-09, Vol.146 (37), p.25788-25798</ispartof><rights>2024 The Authors. Published by American Chemical Society</rights><rights>2024 The Authors. Published by American Chemical Society 2024 The Authors</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-a338t-cc3fac4dcea4c386178e26675fa10802ef6c6e2b9f43827a7e90a2e57921f9ea3</cites><orcidid>0000-0002-4206-5908 ; 0000-0001-7682-8320 ; 0000-0002-8445-2543</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://pubs.acs.org/doi/pdf/10.1021/jacs.4c08416$$EPDF$$P50$$Gacs$$H</linktopdf><linktohtml>$$Uhttps://pubs.acs.org/doi/10.1021/jacs.4c08416$$EHTML$$P50$$Gacs$$H</linktohtml><link.rule.ids>230,314,777,781,882,2752,27057,27905,27906,56719,56769</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/39224092$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Lin, Xiaoxi</creatorcontrib><creatorcontrib>Mandal, Shaswati</creatorcontrib><creatorcontrib>Nithun, Raj V.</creatorcontrib><creatorcontrib>Kolla, Rajasekhar</creatorcontrib><creatorcontrib>Bouri, Bouchra</creatorcontrib><creatorcontrib>Lashuel, Hilal A.</creatorcontrib><creatorcontrib>Jbara, Muhammad</creatorcontrib><title>A Versatile Method for Site-Specific Chemical Installation of Aromatic Posttranslational Modification Analogs into Proteins</title><title>Journal of the American Chemical Society</title><addtitle>J. Am. Chem. Soc</addtitle><description>Posttranslational modifications (PTMs) of proteins play central roles in regulating the protein structure, interactome, and functions. A notable modification site is the aromatic side chain of Tyr, which undergoes modifications such as phosphorylation and nitration. Despite the biological and physiological importance of Tyr-PTMs, our current understanding of the mechanisms by which these modifications contribute to human health and disease remains incomplete. This knowledge gap arises from the absence of natural amino acids that can mimic these PTMs and the lack of synthetic tools for the site-specific introduction of aromatic PTMs into proteins. Herein, we describe a facile method for the site-specific chemical installation of aromatic PTMs into proteins through palladium-mediated S–C(sp2) bond formation under ambient conditions. We demonstrate the incorporation of novel PTMs such as Tyr-nitration and phosphorylation analogs to synthetic and recombinantly expressed Cys-containing peptides and proteins within minutes and in good yields. To demonstrate the versatility of our approach, we employed it to prepare 10 site-specifically modified proteins, including nitrated and phosphorylated analogs of Myc and Max proteins. Furthermore, we prepared a focused library of site-specifically nitrated and phosphorylated α–synuclein (α-Syn) protein, which enabled, for the first time, deciphering the role of these competing modifications in regulating α-Syn conformation aggregation in vitro. Our strategy offers advantages over synthetic or semisynthetic approaches, as it enables rapid and selective transfer of rarely explored aromatic PTMs into recombinant proteins, thus facilitating the generation of novel libraries of homogeneous posttranslationally modified proteins for biomarker discovery, mechanistic studies, and drug discovery.</description><subject>alpha-Synuclein - chemistry</subject><subject>alpha-Synuclein - metabolism</subject><subject>biomarkers</subject><subject>drugs</subject><subject>human health</subject><subject>Humans</subject><subject>peptides</subject><subject>Phosphorylation</subject><subject>post-translational modification</subject><subject>Protein Processing, Post-Translational</subject><subject>protein structure</subject><subject>Proteins - chemistry</subject><subject>Proteins - metabolism</subject><subject>Tyrosine - chemistry</subject><issn>0002-7863</issn><issn>1520-5126</issn><issn>1520-5126</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkctPGzEQxi1UBIFy41z52EMX_Nq191RFUXlIIJBoe7WMMyaOdtep7VSq-OfxKuEl9cDJGs9vvnl8CB1TckIJo6dLY9OJsEQJ2uygCa0ZqWrKmk9oQghhlVQN30cHKS1LKJiie2ift4wJ0rIJepzi3xCTyb4DfA15EebYhYjvfIbqbgXWO2_xbAG9t6bDl0PKpusKHgYcHJ7G0JfA4tuQco5mSJtcQa_DfKzdoNPyEx4S9kMO-DaGDH5In9GuM12Co-17iH6d_fg5u6iubs4vZ9OrynCucmUtd8aKuQUjLFcNlQpY08jaGUoUYeAa2wC7b53gikkjoSWGQS1bRl0Lhh-i7xvd1fq-h6IzlEk7vYq-N_GfDsbr95nBL_RD-KspFWy8cVH4ulWI4c8aUta9TxbKIQYI66Q5rblUNRHyA2gxRQpCRtVvG9TGkFIE9zISJXrsq0dv9dbbgn95u8YL_Gzma-uxahnWsRw9_V_rCb8Yr84</recordid><startdate>20240918</startdate><enddate>20240918</enddate><creator>Lin, Xiaoxi</creator><creator>Mandal, Shaswati</creator><creator>Nithun, Raj V.</creator><creator>Kolla, Rajasekhar</creator><creator>Bouri, Bouchra</creator><creator>Lashuel, Hilal A.</creator><creator>Jbara, Muhammad</creator><general>American Chemical Society</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7S9</scope><scope>L.6</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0002-4206-5908</orcidid><orcidid>https://orcid.org/0000-0001-7682-8320</orcidid><orcidid>https://orcid.org/0000-0002-8445-2543</orcidid></search><sort><creationdate>20240918</creationdate><title>A Versatile Method for Site-Specific Chemical Installation of Aromatic Posttranslational Modification Analogs into Proteins</title><author>Lin, Xiaoxi ; Mandal, Shaswati ; Nithun, Raj V. ; Kolla, Rajasekhar ; Bouri, Bouchra ; Lashuel, Hilal A. ; Jbara, Muhammad</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a338t-cc3fac4dcea4c386178e26675fa10802ef6c6e2b9f43827a7e90a2e57921f9ea3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>alpha-Synuclein - chemistry</topic><topic>alpha-Synuclein - metabolism</topic><topic>biomarkers</topic><topic>drugs</topic><topic>human health</topic><topic>Humans</topic><topic>peptides</topic><topic>Phosphorylation</topic><topic>post-translational modification</topic><topic>Protein Processing, Post-Translational</topic><topic>protein structure</topic><topic>Proteins - chemistry</topic><topic>Proteins - metabolism</topic><topic>Tyrosine - chemistry</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lin, Xiaoxi</creatorcontrib><creatorcontrib>Mandal, Shaswati</creatorcontrib><creatorcontrib>Nithun, Raj V.</creatorcontrib><creatorcontrib>Kolla, Rajasekhar</creatorcontrib><creatorcontrib>Bouri, Bouchra</creatorcontrib><creatorcontrib>Lashuel, Hilal A.</creatorcontrib><creatorcontrib>Jbara, Muhammad</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>AGRICOLA</collection><collection>AGRICOLA - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Journal of the American Chemical Society</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lin, Xiaoxi</au><au>Mandal, Shaswati</au><au>Nithun, Raj V.</au><au>Kolla, Rajasekhar</au><au>Bouri, Bouchra</au><au>Lashuel, Hilal A.</au><au>Jbara, Muhammad</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A Versatile Method for Site-Specific Chemical Installation of Aromatic Posttranslational Modification Analogs into Proteins</atitle><jtitle>Journal of the American Chemical Society</jtitle><addtitle>J. Am. Chem. Soc</addtitle><date>2024-09-18</date><risdate>2024</risdate><volume>146</volume><issue>37</issue><spage>25788</spage><epage>25798</epage><pages>25788-25798</pages><issn>0002-7863</issn><issn>1520-5126</issn><eissn>1520-5126</eissn><abstract>Posttranslational modifications (PTMs) of proteins play central roles in regulating the protein structure, interactome, and functions. A notable modification site is the aromatic side chain of Tyr, which undergoes modifications such as phosphorylation and nitration. Despite the biological and physiological importance of Tyr-PTMs, our current understanding of the mechanisms by which these modifications contribute to human health and disease remains incomplete. This knowledge gap arises from the absence of natural amino acids that can mimic these PTMs and the lack of synthetic tools for the site-specific introduction of aromatic PTMs into proteins. Herein, we describe a facile method for the site-specific chemical installation of aromatic PTMs into proteins through palladium-mediated S–C(sp2) bond formation under ambient conditions. We demonstrate the incorporation of novel PTMs such as Tyr-nitration and phosphorylation analogs to synthetic and recombinantly expressed Cys-containing peptides and proteins within minutes and in good yields. To demonstrate the versatility of our approach, we employed it to prepare 10 site-specifically modified proteins, including nitrated and phosphorylated analogs of Myc and Max proteins. Furthermore, we prepared a focused library of site-specifically nitrated and phosphorylated α–synuclein (α-Syn) protein, which enabled, for the first time, deciphering the role of these competing modifications in regulating α-Syn conformation aggregation in vitro. Our strategy offers advantages over synthetic or semisynthetic approaches, as it enables rapid and selective transfer of rarely explored aromatic PTMs into recombinant proteins, thus facilitating the generation of novel libraries of homogeneous posttranslationally modified proteins for biomarker discovery, mechanistic studies, and drug discovery.</abstract><cop>United States</cop><pub>American Chemical Society</pub><pmid>39224092</pmid><doi>10.1021/jacs.4c08416</doi><tpages>11</tpages><orcidid>https://orcid.org/0000-0002-4206-5908</orcidid><orcidid>https://orcid.org/0000-0001-7682-8320</orcidid><orcidid>https://orcid.org/0000-0002-8445-2543</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | alpha-Synuclein - chemistry alpha-Synuclein - metabolism biomarkers drugs human health Humans peptides Phosphorylation post-translational modification Protein Processing, Post-Translational protein structure Proteins - chemistry Proteins - metabolism Tyrosine - chemistry |
title | A Versatile Method for Site-Specific Chemical Installation of Aromatic Posttranslational Modification Analogs into Proteins |
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