DNA barcoding: an efficient tool to overcome authentication challenges in the herbal market
The past couple of decades have witnessed global resurgence of herbal‐based health care. As a result, the trade of raw drugs has surged globally. Accurate and fast scientific identification of the plant(s) is the key to success for the herbal drug industry. The conventional approach is to engage an...
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| Veröffentlicht in: | Plant biotechnology journal 2016-01, Vol.14 (1), p.8-21 |
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| creator | Mishra, Priyanka Kumar, Amit Nagireddy, Akshitha Mani, Daya N Shukla, Ashutosh K Tiwari, Rakesh Sundaresan, Velusamy |
| description | The past couple of decades have witnessed global resurgence of herbal‐based health care. As a result, the trade of raw drugs has surged globally. Accurate and fast scientific identification of the plant(s) is the key to success for the herbal drug industry. The conventional approach is to engage an expert taxonomist, who uses a mix of traditional and modern techniques for precise plant identification. However, for bulk identification at industrial scale, the process is protracted and time‐consuming. DNA barcoding, on the other hand, offers an alternative and feasible taxonomic tool box for rapid and robust species identification. For the success of DNA barcode, the barcode loci must have sufficient information to differentiate unambiguously between closely related plant species and discover new cryptic species. For herbal plant identification, matK, rbcL, trnH‐psbA, ITS, trnL‐F, 5S‐rRNA and 18S‐rRNA have been used as successful DNA barcodes. Emerging advances in DNA barcoding coupled with next‐generation sequencing and high‐resolution melting curve analysis have paved the way for successful species‐level resolution recovered from finished herbal products. Further, development of multilocus strategy and its application has provided new vistas to the DNA barcode‐based plant identification for herbal drug industry. For successful and acceptable identification of herbal ingredients and a holistic quality control of the drug, DNA barcoding needs to work harmoniously with other components of the systems biology approach. We suggest that for effectively resolving authentication challenges associated with the herbal market, DNA barcoding must be used in conjunction with metabolomics along with need‐based transcriptomics and proteomics. |
| doi_str_mv | 10.1111/pbi.12419 |
| format | Article |
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As a result, the trade of raw drugs has surged globally. Accurate and fast scientific identification of the plant(s) is the key to success for the herbal drug industry. The conventional approach is to engage an expert taxonomist, who uses a mix of traditional and modern techniques for precise plant identification. However, for bulk identification at industrial scale, the process is protracted and time‐consuming. DNA barcoding, on the other hand, offers an alternative and feasible taxonomic tool box for rapid and robust species identification. For the success of DNA barcode, the barcode loci must have sufficient information to differentiate unambiguously between closely related plant species and discover new cryptic species. For herbal plant identification, matK, rbcL, trnH‐psbA, ITS, trnL‐F, 5S‐rRNA and 18S‐rRNA have been used as successful DNA barcodes. Emerging advances in DNA barcoding coupled with next‐generation sequencing and high‐resolution melting curve analysis have paved the way for successful species‐level resolution recovered from finished herbal products. Further, development of multilocus strategy and its application has provided new vistas to the DNA barcode‐based plant identification for herbal drug industry. For successful and acceptable identification of herbal ingredients and a holistic quality control of the drug, DNA barcoding needs to work harmoniously with other components of the systems biology approach. We suggest that for effectively resolving authentication challenges associated with the herbal market, DNA barcoding must be used in conjunction with metabolomics along with need‐based transcriptomics and proteomics.</description><identifier>ISSN: 1467-7644</identifier><identifier>EISSN: 1467-7652</identifier><identifier>DOI: 10.1111/pbi.12419</identifier><identifier>PMID: 26079154</identifier><language>eng</language><publisher>England: Blackwell Pub</publisher><subject>Acceptability ; Authentication ; Bar codes ; barcoding ; Biological effects ; biological reference material herbal barcode library ; Biology ; Commerce ; Cryptic species ; Deoxyribonucleic acid ; DNA ; DNA barcoding ; DNA Barcoding, Taxonomic - methods ; DNA sequencing ; Drugs ; Economic conditions ; Feasibility ; Gene sequencing ; Genomics ; Health care ; health services ; herbal market ; Herbal medicine ; herbal medicines ; High resolution ; high-throughput nucleotide sequencing ; Identification ; Industry ; Ingredients ; internal transcribed spacers ; Internationality ; Joining ; Loci ; Markets ; Melting ; Melting curve ; Metabolomics ; molecular techniques ; plant identification ; Plant species ; Plant species introduction ; Plants (organisms) ; Plants, Medicinal - genetics ; Proteomics ; Quality control ; Review ; Robustness ; rRNA 18S ; rRNA 5S ; species identification ; System effectiveness ; trade ; traditional tools ; transcriptomics</subject><ispartof>Plant biotechnology journal, 2016-01, Vol.14 (1), p.8-21</ispartof><rights>2015 Society for Experimental Biology, Association of Applied Biologists and John Wiley & Sons Ltd</rights><rights>2015 Society for Experimental Biology, Association of Applied Biologists and John Wiley & Sons Ltd.</rights><rights>2016. 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As a result, the trade of raw drugs has surged globally. Accurate and fast scientific identification of the plant(s) is the key to success for the herbal drug industry. The conventional approach is to engage an expert taxonomist, who uses a mix of traditional and modern techniques for precise plant identification. However, for bulk identification at industrial scale, the process is protracted and time‐consuming. DNA barcoding, on the other hand, offers an alternative and feasible taxonomic tool box for rapid and robust species identification. For the success of DNA barcode, the barcode loci must have sufficient information to differentiate unambiguously between closely related plant species and discover new cryptic species. For herbal plant identification, matK, rbcL, trnH‐psbA, ITS, trnL‐F, 5S‐rRNA and 18S‐rRNA have been used as successful DNA barcodes. Emerging advances in DNA barcoding coupled with next‐generation sequencing and high‐resolution melting curve analysis have paved the way for successful species‐level resolution recovered from finished herbal products. Further, development of multilocus strategy and its application has provided new vistas to the DNA barcode‐based plant identification for herbal drug industry. For successful and acceptable identification of herbal ingredients and a holistic quality control of the drug, DNA barcoding needs to work harmoniously with other components of the systems biology approach. We suggest that for effectively resolving authentication challenges associated with the herbal market, DNA barcoding must be used in conjunction with metabolomics along with need‐based transcriptomics and proteomics.</description><subject>Acceptability</subject><subject>Authentication</subject><subject>Bar codes</subject><subject>barcoding</subject><subject>Biological effects</subject><subject>biological reference material herbal barcode library</subject><subject>Biology</subject><subject>Commerce</subject><subject>Cryptic species</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>DNA barcoding</subject><subject>DNA Barcoding, Taxonomic - methods</subject><subject>DNA sequencing</subject><subject>Drugs</subject><subject>Economic conditions</subject><subject>Feasibility</subject><subject>Gene sequencing</subject><subject>Genomics</subject><subject>Health care</subject><subject>health services</subject><subject>herbal market</subject><subject>Herbal medicine</subject><subject>herbal medicines</subject><subject>High resolution</subject><subject>high-throughput nucleotide sequencing</subject><subject>Identification</subject><subject>Industry</subject><subject>Ingredients</subject><subject>internal transcribed spacers</subject><subject>Internationality</subject><subject>Joining</subject><subject>Loci</subject><subject>Markets</subject><subject>Melting</subject><subject>Melting curve</subject><subject>Metabolomics</subject><subject>molecular techniques</subject><subject>plant identification</subject><subject>Plant species</subject><subject>Plant species introduction</subject><subject>Plants (organisms)</subject><subject>Plants, Medicinal - genetics</subject><subject>Proteomics</subject><subject>Quality control</subject><subject>Review</subject><subject>Robustness</subject><subject>rRNA 18S</subject><subject>rRNA 5S</subject><subject>species identification</subject><subject>System effectiveness</subject><subject>trade</subject><subject>traditional tools</subject><subject>transcriptomics</subject><issn>1467-7644</issn><issn>1467-7652</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNqNkktvEzEUhUcIREthwR8AS2xgkdbX49ewQaVQWqkCJOiKheXxI3GZ2MGeKeq_x2naiCIh8MK2dD4fnXt9m-Yp4H2o62DVh30gFLp7zS5QLmaCM3J_e6d0p3lUygXGBDjjD5sdwrHogNHd5tu7j4eo19kkG-L8NdIROe-DCS6OaExpqBtKl64CS4f0NC6qEIweQ4rILPQwuDh3BYWIqoQWLvd6QEudv7vxcfPA66G4JzfnXnN-_P7r0cns7NOH06PDs5nhjHYz7mwrtSMCrGDaeMK0t-ABJBfWWSY5597attNAjKBGs64HaQ300AogfbvXvNn4rqZ-6aypCbMe1CqHmuNKJR3UXSWGhZqnSwXQSikprw4vbxxy-jG5MqplKMYNg44uTUWBxJh2reTk36gQfF0Wx_-BciwlYe0affEHepGmHGvXFHSYE0GArWO-2lAmp1Ky89saAav1JKg6Cep6Eir77PembMnbr6_AwQb4GQZ39Xcn9fnt6a3l880Lr5PS8xyKOv9CMHCMgUgiZPsLf5zF7w</recordid><startdate>201601</startdate><enddate>201601</enddate><creator>Mishra, Priyanka</creator><creator>Kumar, Amit</creator><creator>Nagireddy, Akshitha</creator><creator>Mani, Daya N</creator><creator>Shukla, Ashutosh K</creator><creator>Tiwari, Rakesh</creator><creator>Sundaresan, Velusamy</creator><general>Blackwell Pub</general><general>John Wiley & Sons, Inc</general><general>John Wiley and Sons Inc</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>L6V</scope><scope>LK8</scope><scope>M7P</scope><scope>M7S</scope><scope>P64</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>PTHSS</scope><scope>7X8</scope><scope>7TM</scope><scope>7U5</scope><scope>F28</scope><scope>L7M</scope><scope>5PM</scope></search><sort><creationdate>201601</creationdate><title>DNA barcoding: an efficient tool to overcome authentication challenges in the herbal market</title><author>Mishra, Priyanka ; Kumar, Amit ; Nagireddy, Akshitha ; Mani, Daya N ; Shukla, Ashutosh K ; Tiwari, Rakesh ; Sundaresan, Velusamy</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c6549-6ed38ae271d75acf25afd1f11867ded58666fdd39a12c74ca59b18dc1b13712b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Acceptability</topic><topic>Authentication</topic><topic>Bar codes</topic><topic>barcoding</topic><topic>Biological effects</topic><topic>biological reference material herbal barcode library</topic><topic>Biology</topic><topic>Commerce</topic><topic>Cryptic species</topic><topic>Deoxyribonucleic acid</topic><topic>DNA</topic><topic>DNA barcoding</topic><topic>DNA Barcoding, Taxonomic - 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As a result, the trade of raw drugs has surged globally. Accurate and fast scientific identification of the plant(s) is the key to success for the herbal drug industry. The conventional approach is to engage an expert taxonomist, who uses a mix of traditional and modern techniques for precise plant identification. However, for bulk identification at industrial scale, the process is protracted and time‐consuming. DNA barcoding, on the other hand, offers an alternative and feasible taxonomic tool box for rapid and robust species identification. For the success of DNA barcode, the barcode loci must have sufficient information to differentiate unambiguously between closely related plant species and discover new cryptic species. For herbal plant identification, matK, rbcL, trnH‐psbA, ITS, trnL‐F, 5S‐rRNA and 18S‐rRNA have been used as successful DNA barcodes. Emerging advances in DNA barcoding coupled with next‐generation sequencing and high‐resolution melting curve analysis have paved the way for successful species‐level resolution recovered from finished herbal products. Further, development of multilocus strategy and its application has provided new vistas to the DNA barcode‐based plant identification for herbal drug industry. For successful and acceptable identification of herbal ingredients and a holistic quality control of the drug, DNA barcoding needs to work harmoniously with other components of the systems biology approach. We suggest that for effectively resolving authentication challenges associated with the herbal market, DNA barcoding must be used in conjunction with metabolomics along with need‐based transcriptomics and proteomics.</abstract><cop>England</cop><pub>Blackwell Pub</pub><pmid>26079154</pmid><doi>10.1111/pbi.12419</doi><tpages>14</tpages><oa>free_for_read</oa></addata></record> |
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| subjects | Acceptability Authentication Bar codes barcoding Biological effects biological reference material herbal barcode library Biology Commerce Cryptic species Deoxyribonucleic acid DNA DNA barcoding DNA Barcoding, Taxonomic - methods DNA sequencing Drugs Economic conditions Feasibility Gene sequencing Genomics Health care health services herbal market Herbal medicine herbal medicines High resolution high-throughput nucleotide sequencing Identification Industry Ingredients internal transcribed spacers Internationality Joining Loci Markets Melting Melting curve Metabolomics molecular techniques plant identification Plant species Plant species introduction Plants (organisms) Plants, Medicinal - genetics Proteomics Quality control Review Robustness rRNA 18S rRNA 5S species identification System effectiveness trade traditional tools transcriptomics |
| title | DNA barcoding: an efficient tool to overcome authentication challenges in the herbal market |
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