Evaluation of CHROMagar™ B. cepacia agar for the detection of Burkholderia cepacia complex species from sputum samples of patients with cystic fibrosis
Introduction Burkholderia cepacia complex (BCC) are non-fermenting Gram-negative bacteria that can chronically colonize the lungs of people with cystic fibrosis (pwCF), causing a severe and progressive respiratory failure, post-transplant complications and epidemic outbreaks. Therefore, rapid and ac...
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creator | Maruri-Aransolo, Ainhize de Dios Caballero, Juan Michelena, Malkoa Medina-Pascual, María José Carrasco, Gema Asensio, Oscar Cols, Maria Cantón, Rafael |
description | Introduction
Burkholderia cepacia
complex (BCC) are non-fermenting Gram-negative bacteria that can chronically colonize the lungs of people with cystic fibrosis (pwCF), causing a severe and progressive respiratory failure, post-transplant complications and epidemic outbreaks. Therefore, rapid and accurate identification of these bacteria is relevant for pwCF, in order to facilitate early eradication and prevent chronic colonization. However, BCCs are often quite difficult to detect on culture media as they have a slow growth rate and can be hidden by other fast-growing microorganisms, including
Pseudomonas aeruginosa
and filamentous fungi.
Material and methods
We evaluated the sensitivity of CHROMagar™
B. cepacia
agar using 11 isolates from a well-characterized BCC collection, using BCA agar (Oxoid, UK) as a gold standard. We also studied 180 clinical sputum samples to calculate positive (PPV) and negative (NPV) predictive values. Furthermore, we used three of the well-characterized BCC isolates to determine the limit of detection (LOD).
Results
Eleven isolates grew on CHROMagar™
B. cepacia
at 37ºC after 48 h. The NPV and PPV of CHROMagar™
B. cepacia
were 100% and 87.5%, respectively. The LOD of CHROMagar™
B. cepacia
was around 1 × 10
3
CFU/ml, requiring a ten-fold dilution lower bacterial load than BCA for BCC detection.
Conclusion
CHROMagar™
B. cepacia
agar proved to have a very good sensitivity and specificity for the detection of clinical BCCs. Moreover, the chromogenic nature of the medium allowed us to clearly differentiate BCC from other Gram-negative species, filamentous fungi and yeasts, thereby facilitating the identification of contaminants. |
doi_str_mv | 10.1007/s10096-024-04845-4 |
format | Article |
fullrecord | <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_11271321</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>3059257826</sourcerecordid><originalsourceid>FETCH-LOGICAL-c426t-11c6e716ae8d0bac79f54ff29029a5dab56dfb54e6027e04d33636a78bd54cc53</originalsourceid><addsrcrecordid>eNp9kc9u1DAQxi0EotvCC3BAlrhwSfHfODkhumpppaJKFZwtxxnvuiRxsJNC77wEVx6NJ6mX7bbAgYvH9vy-mbE_hF5QckgJUW9SXuuyIEwURFRCFuIRWlDB84Yr_hgtSM1FUSvG99B-SlckiyqlnqI9XqmKKCkX6MfxtelmM_kw4ODw8vTy4oNZmfjr-098dIgtjMZ6gzdX2IWIpzXgFiawO8XRHD-vQ9dCzNgOt6EfO_iG0wjWQ8Iuhj4f5mnOwWxyaaMdc18YpoS_-mmN7U2avMXONzEkn56hJ850CZ7fxQP06eT44_K0OL94f7Z8d15YwcqpoNSWoGhpoGpJY6yqnRTOsZqw2sjWNLJsXSMFlIQpIKLlvOSlUVXTSmGt5Afo7bbuODc9tDYPFE2nx-h7E290MF7_nRn8Wq_CtaaUKcoZzRVe31WI4csMadK9Txa6zgwQ5qQ5kTWTqmJlRl_9g16FOQ75fZmqmCJcSJUptqVs_okUwd1PQ4neWK-31utsvf5tvRZZ9PLPd9xLdl5ngG-BlFPDCuJD7_-UvQU2Nr3P</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>3082703457</pqid></control><display><type>article</type><title>Evaluation of CHROMagar™ B. cepacia agar for the detection of Burkholderia cepacia complex species from sputum samples of patients with cystic fibrosis</title><source>MEDLINE</source><source>SpringerNature Journals</source><creator>Maruri-Aransolo, Ainhize ; de Dios Caballero, Juan ; Michelena, Malkoa ; Medina-Pascual, María José ; Carrasco, Gema ; Asensio, Oscar ; Cols, Maria ; Cantón, Rafael</creator><creatorcontrib>Maruri-Aransolo, Ainhize ; de Dios Caballero, Juan ; Michelena, Malkoa ; Medina-Pascual, María José ; Carrasco, Gema ; Asensio, Oscar ; Cols, Maria ; Cantón, Rafael ; GEIFQ group ; the GEIFQ group</creatorcontrib><description>Introduction
Burkholderia cepacia
complex (BCC) are non-fermenting Gram-negative bacteria that can chronically colonize the lungs of people with cystic fibrosis (pwCF), causing a severe and progressive respiratory failure, post-transplant complications and epidemic outbreaks. Therefore, rapid and accurate identification of these bacteria is relevant for pwCF, in order to facilitate early eradication and prevent chronic colonization. However, BCCs are often quite difficult to detect on culture media as they have a slow growth rate and can be hidden by other fast-growing microorganisms, including
Pseudomonas aeruginosa
and filamentous fungi.
Material and methods
We evaluated the sensitivity of CHROMagar™
B. cepacia
agar using 11 isolates from a well-characterized BCC collection, using BCA agar (Oxoid, UK) as a gold standard. We also studied 180 clinical sputum samples to calculate positive (PPV) and negative (NPV) predictive values. Furthermore, we used three of the well-characterized BCC isolates to determine the limit of detection (LOD).
Results
Eleven isolates grew on CHROMagar™
B. cepacia
at 37ºC after 48 h. The NPV and PPV of CHROMagar™
B. cepacia
were 100% and 87.5%, respectively. The LOD of CHROMagar™
B. cepacia
was around 1 × 10
3
CFU/ml, requiring a ten-fold dilution lower bacterial load than BCA for BCC detection.
Conclusion
CHROMagar™
B. cepacia
agar proved to have a very good sensitivity and specificity for the detection of clinical BCCs. Moreover, the chromogenic nature of the medium allowed us to clearly differentiate BCC from other Gram-negative species, filamentous fungi and yeasts, thereby facilitating the identification of contaminants.</description><identifier>ISSN: 0934-9723</identifier><identifier>ISSN: 1435-4373</identifier><identifier>EISSN: 1435-4373</identifier><identifier>DOI: 10.1007/s10096-024-04845-4</identifier><identifier>PMID: 38780755</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Agar ; Bacteria ; Bacteriological Techniques - methods ; Biomedical and Life Sciences ; Biomedicine ; Burkholderia cepacia ; Burkholderia cepacia complex - classification ; Burkholderia cepacia complex - isolation & purification ; Burkholderia Infections - diagnosis ; Burkholderia Infections - microbiology ; Contaminants ; Culture media ; Culture Media - chemistry ; Cystic fibrosis ; Cystic Fibrosis - complications ; Cystic Fibrosis - microbiology ; Dilution ; Filamentous microorganisms ; Fungi ; Gram-negative bacteria ; Humans ; Internal Medicine ; Introduced species ; Lung transplantation ; Medical Microbiology ; Microorganisms ; Original ; Original Article ; Sensitivity analysis ; Sensitivity and Specificity ; Sputum ; Sputum - microbiology ; Yeasts</subject><ispartof>European journal of clinical microbiology & infectious diseases, 2024-07, Vol.43 (7), p.1349-1353</ispartof><rights>The Author(s) 2024</rights><rights>2024. The Author(s).</rights><rights>The Author(s) 2024. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>The Author(s) 2024 2024</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c426t-11c6e716ae8d0bac79f54ff29029a5dab56dfb54e6027e04d33636a78bd54cc53</cites><orcidid>0000-0003-1675-3173 ; 0000-0002-3096-0382 ; 0000-0003-0950-884X</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s10096-024-04845-4$$EPDF$$P50$$Gspringer$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s10096-024-04845-4$$EHTML$$P50$$Gspringer$$Hfree_for_read</linktohtml><link.rule.ids>230,314,780,784,885,27924,27925,41488,42557,51319</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/38780755$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Maruri-Aransolo, Ainhize</creatorcontrib><creatorcontrib>de Dios Caballero, Juan</creatorcontrib><creatorcontrib>Michelena, Malkoa</creatorcontrib><creatorcontrib>Medina-Pascual, María José</creatorcontrib><creatorcontrib>Carrasco, Gema</creatorcontrib><creatorcontrib>Asensio, Oscar</creatorcontrib><creatorcontrib>Cols, Maria</creatorcontrib><creatorcontrib>Cantón, Rafael</creatorcontrib><creatorcontrib>GEIFQ group</creatorcontrib><creatorcontrib>the GEIFQ group</creatorcontrib><title>Evaluation of CHROMagar™ B. cepacia agar for the detection of Burkholderia cepacia complex species from sputum samples of patients with cystic fibrosis</title><title>European journal of clinical microbiology & infectious diseases</title><addtitle>Eur J Clin Microbiol Infect Dis</addtitle><addtitle>Eur J Clin Microbiol Infect Dis</addtitle><description>Introduction
Burkholderia cepacia
complex (BCC) are non-fermenting Gram-negative bacteria that can chronically colonize the lungs of people with cystic fibrosis (pwCF), causing a severe and progressive respiratory failure, post-transplant complications and epidemic outbreaks. Therefore, rapid and accurate identification of these bacteria is relevant for pwCF, in order to facilitate early eradication and prevent chronic colonization. However, BCCs are often quite difficult to detect on culture media as they have a slow growth rate and can be hidden by other fast-growing microorganisms, including
Pseudomonas aeruginosa
and filamentous fungi.
Material and methods
We evaluated the sensitivity of CHROMagar™
B. cepacia
agar using 11 isolates from a well-characterized BCC collection, using BCA agar (Oxoid, UK) as a gold standard. We also studied 180 clinical sputum samples to calculate positive (PPV) and negative (NPV) predictive values. Furthermore, we used three of the well-characterized BCC isolates to determine the limit of detection (LOD).
Results
Eleven isolates grew on CHROMagar™
B. cepacia
at 37ºC after 48 h. The NPV and PPV of CHROMagar™
B. cepacia
were 100% and 87.5%, respectively. The LOD of CHROMagar™
B. cepacia
was around 1 × 10
3
CFU/ml, requiring a ten-fold dilution lower bacterial load than BCA for BCC detection.
Conclusion
CHROMagar™
B. cepacia
agar proved to have a very good sensitivity and specificity for the detection of clinical BCCs. Moreover, the chromogenic nature of the medium allowed us to clearly differentiate BCC from other Gram-negative species, filamentous fungi and yeasts, thereby facilitating the identification of contaminants.</description><subject>Agar</subject><subject>Bacteria</subject><subject>Bacteriological Techniques - methods</subject><subject>Biomedical and Life Sciences</subject><subject>Biomedicine</subject><subject>Burkholderia cepacia</subject><subject>Burkholderia cepacia complex - classification</subject><subject>Burkholderia cepacia complex - isolation & purification</subject><subject>Burkholderia Infections - diagnosis</subject><subject>Burkholderia Infections - microbiology</subject><subject>Contaminants</subject><subject>Culture media</subject><subject>Culture Media - chemistry</subject><subject>Cystic fibrosis</subject><subject>Cystic Fibrosis - complications</subject><subject>Cystic Fibrosis - microbiology</subject><subject>Dilution</subject><subject>Filamentous microorganisms</subject><subject>Fungi</subject><subject>Gram-negative bacteria</subject><subject>Humans</subject><subject>Internal Medicine</subject><subject>Introduced species</subject><subject>Lung transplantation</subject><subject>Medical Microbiology</subject><subject>Microorganisms</subject><subject>Original</subject><subject>Original Article</subject><subject>Sensitivity analysis</subject><subject>Sensitivity and Specificity</subject><subject>Sputum</subject><subject>Sputum - microbiology</subject><subject>Yeasts</subject><issn>0934-9723</issn><issn>1435-4373</issn><issn>1435-4373</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>C6C</sourceid><sourceid>EIF</sourceid><recordid>eNp9kc9u1DAQxi0EotvCC3BAlrhwSfHfODkhumpppaJKFZwtxxnvuiRxsJNC77wEVx6NJ6mX7bbAgYvH9vy-mbE_hF5QckgJUW9SXuuyIEwURFRCFuIRWlDB84Yr_hgtSM1FUSvG99B-SlckiyqlnqI9XqmKKCkX6MfxtelmM_kw4ODw8vTy4oNZmfjr-098dIgtjMZ6gzdX2IWIpzXgFiawO8XRHD-vQ9dCzNgOt6EfO_iG0wjWQ8Iuhj4f5mnOwWxyaaMdc18YpoS_-mmN7U2avMXONzEkn56hJ850CZ7fxQP06eT44_K0OL94f7Z8d15YwcqpoNSWoGhpoGpJY6yqnRTOsZqw2sjWNLJsXSMFlIQpIKLlvOSlUVXTSmGt5Afo7bbuODc9tDYPFE2nx-h7E290MF7_nRn8Wq_CtaaUKcoZzRVe31WI4csMadK9Txa6zgwQ5qQ5kTWTqmJlRl_9g16FOQ75fZmqmCJcSJUptqVs_okUwd1PQ4neWK-31utsvf5tvRZZ9PLPd9xLdl5ngG-BlFPDCuJD7_-UvQU2Nr3P</recordid><startdate>20240701</startdate><enddate>20240701</enddate><creator>Maruri-Aransolo, Ainhize</creator><creator>de Dios Caballero, Juan</creator><creator>Michelena, Malkoa</creator><creator>Medina-Pascual, María José</creator><creator>Carrasco, Gema</creator><creator>Asensio, Oscar</creator><creator>Cols, Maria</creator><creator>Cantón, Rafael</creator><general>Springer Berlin Heidelberg</general><general>Springer Nature B.V</general><scope>C6C</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7U9</scope><scope>C1K</scope><scope>H94</scope><scope>K9.</scope><scope>M7N</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0003-1675-3173</orcidid><orcidid>https://orcid.org/0000-0002-3096-0382</orcidid><orcidid>https://orcid.org/0000-0003-0950-884X</orcidid></search><sort><creationdate>20240701</creationdate><title>Evaluation of CHROMagar™ B. cepacia agar for the detection of Burkholderia cepacia complex species from sputum samples of patients with cystic fibrosis</title><author>Maruri-Aransolo, Ainhize ; de Dios Caballero, Juan ; Michelena, Malkoa ; Medina-Pascual, María José ; Carrasco, Gema ; Asensio, Oscar ; Cols, Maria ; Cantón, Rafael</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c426t-11c6e716ae8d0bac79f54ff29029a5dab56dfb54e6027e04d33636a78bd54cc53</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Agar</topic><topic>Bacteria</topic><topic>Bacteriological Techniques - methods</topic><topic>Biomedical and Life Sciences</topic><topic>Biomedicine</topic><topic>Burkholderia cepacia</topic><topic>Burkholderia cepacia complex - classification</topic><topic>Burkholderia cepacia complex - isolation & purification</topic><topic>Burkholderia Infections - diagnosis</topic><topic>Burkholderia Infections - microbiology</topic><topic>Contaminants</topic><topic>Culture media</topic><topic>Culture Media - chemistry</topic><topic>Cystic fibrosis</topic><topic>Cystic Fibrosis - complications</topic><topic>Cystic Fibrosis - microbiology</topic><topic>Dilution</topic><topic>Filamentous microorganisms</topic><topic>Fungi</topic><topic>Gram-negative bacteria</topic><topic>Humans</topic><topic>Internal Medicine</topic><topic>Introduced species</topic><topic>Lung transplantation</topic><topic>Medical Microbiology</topic><topic>Microorganisms</topic><topic>Original</topic><topic>Original Article</topic><topic>Sensitivity analysis</topic><topic>Sensitivity and Specificity</topic><topic>Sputum</topic><topic>Sputum - microbiology</topic><topic>Yeasts</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Maruri-Aransolo, Ainhize</creatorcontrib><creatorcontrib>de Dios Caballero, Juan</creatorcontrib><creatorcontrib>Michelena, Malkoa</creatorcontrib><creatorcontrib>Medina-Pascual, María José</creatorcontrib><creatorcontrib>Carrasco, Gema</creatorcontrib><creatorcontrib>Asensio, Oscar</creatorcontrib><creatorcontrib>Cols, Maria</creatorcontrib><creatorcontrib>Cantón, Rafael</creatorcontrib><creatorcontrib>GEIFQ group</creatorcontrib><creatorcontrib>the GEIFQ group</creatorcontrib><collection>Springer Nature OA Free Journals</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Virology and AIDS Abstracts</collection><collection>Environmental Sciences and Pollution Management</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>European journal of clinical microbiology & infectious diseases</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Maruri-Aransolo, Ainhize</au><au>de Dios Caballero, Juan</au><au>Michelena, Malkoa</au><au>Medina-Pascual, María José</au><au>Carrasco, Gema</au><au>Asensio, Oscar</au><au>Cols, Maria</au><au>Cantón, Rafael</au><aucorp>GEIFQ group</aucorp><aucorp>the GEIFQ group</aucorp><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Evaluation of CHROMagar™ B. cepacia agar for the detection of Burkholderia cepacia complex species from sputum samples of patients with cystic fibrosis</atitle><jtitle>European journal of clinical microbiology & infectious diseases</jtitle><stitle>Eur J Clin Microbiol Infect Dis</stitle><addtitle>Eur J Clin Microbiol Infect Dis</addtitle><date>2024-07-01</date><risdate>2024</risdate><volume>43</volume><issue>7</issue><spage>1349</spage><epage>1353</epage><pages>1349-1353</pages><issn>0934-9723</issn><issn>1435-4373</issn><eissn>1435-4373</eissn><abstract>Introduction
Burkholderia cepacia
complex (BCC) are non-fermenting Gram-negative bacteria that can chronically colonize the lungs of people with cystic fibrosis (pwCF), causing a severe and progressive respiratory failure, post-transplant complications and epidemic outbreaks. Therefore, rapid and accurate identification of these bacteria is relevant for pwCF, in order to facilitate early eradication and prevent chronic colonization. However, BCCs are often quite difficult to detect on culture media as they have a slow growth rate and can be hidden by other fast-growing microorganisms, including
Pseudomonas aeruginosa
and filamentous fungi.
Material and methods
We evaluated the sensitivity of CHROMagar™
B. cepacia
agar using 11 isolates from a well-characterized BCC collection, using BCA agar (Oxoid, UK) as a gold standard. We also studied 180 clinical sputum samples to calculate positive (PPV) and negative (NPV) predictive values. Furthermore, we used three of the well-characterized BCC isolates to determine the limit of detection (LOD).
Results
Eleven isolates grew on CHROMagar™
B. cepacia
at 37ºC after 48 h. The NPV and PPV of CHROMagar™
B. cepacia
were 100% and 87.5%, respectively. The LOD of CHROMagar™
B. cepacia
was around 1 × 10
3
CFU/ml, requiring a ten-fold dilution lower bacterial load than BCA for BCC detection.
Conclusion
CHROMagar™
B. cepacia
agar proved to have a very good sensitivity and specificity for the detection of clinical BCCs. Moreover, the chromogenic nature of the medium allowed us to clearly differentiate BCC from other Gram-negative species, filamentous fungi and yeasts, thereby facilitating the identification of contaminants.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><pmid>38780755</pmid><doi>10.1007/s10096-024-04845-4</doi><tpages>5</tpages><orcidid>https://orcid.org/0000-0003-1675-3173</orcidid><orcidid>https://orcid.org/0000-0002-3096-0382</orcidid><orcidid>https://orcid.org/0000-0003-0950-884X</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Agar Bacteria Bacteriological Techniques - methods Biomedical and Life Sciences Biomedicine Burkholderia cepacia Burkholderia cepacia complex - classification Burkholderia cepacia complex - isolation & purification Burkholderia Infections - diagnosis Burkholderia Infections - microbiology Contaminants Culture media Culture Media - chemistry Cystic fibrosis Cystic Fibrosis - complications Cystic Fibrosis - microbiology Dilution Filamentous microorganisms Fungi Gram-negative bacteria Humans Internal Medicine Introduced species Lung transplantation Medical Microbiology Microorganisms Original Original Article Sensitivity analysis Sensitivity and Specificity Sputum Sputum - microbiology Yeasts |
title | Evaluation of CHROMagar™ B. cepacia agar for the detection of Burkholderia cepacia complex species from sputum samples of patients with cystic fibrosis |
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