Metabolic programs of T cell tissue residency empower tumour immunity

Tissue resident memory CD8 + T (T RM ) cells offer rapid and long-term protection at sites of reinfection 1 . Tumour-infiltrating lymphocytes with characteristics of T RM cells maintain enhanced effector functions, predict responses to immunotherapy and accompany better prognoses 2 , 3 . Thus, an im...

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Veröffentlicht in:Nature (London) 2023-09, Vol.621 (7977), p.179-187
Hauptverfasser: Reina-Campos, Miguel, Heeg, Maximilian, Kennewick, Kelly, Mathews, Ian T., Galletti, Giovanni, Luna, Vida, Nguyen, Quynhanh, Huang, Hongling, Milner, J. Justin, Hu, Kenneth H., Vichaidit, Amy, Santillano, Natalie, Boland, Brigid S., Chang, John T., Jain, Mohit, Sharma, Sonia, Krummel, Matthew F., Chi, Hongbo, Bensinger, Steven J., Goldrath, Ananda W.
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container_end_page 187
container_issue 7977
container_start_page 179
container_title Nature (London)
container_volume 621
creator Reina-Campos, Miguel
Heeg, Maximilian
Kennewick, Kelly
Mathews, Ian T.
Galletti, Giovanni
Luna, Vida
Nguyen, Quynhanh
Huang, Hongling
Milner, J. Justin
Hu, Kenneth H.
Vichaidit, Amy
Santillano, Natalie
Boland, Brigid S.
Chang, John T.
Jain, Mohit
Sharma, Sonia
Krummel, Matthew F.
Chi, Hongbo
Bensinger, Steven J.
Goldrath, Ananda W.
description Tissue resident memory CD8 + T (T RM ) cells offer rapid and long-term protection at sites of reinfection 1 . Tumour-infiltrating lymphocytes with characteristics of T RM cells maintain enhanced effector functions, predict responses to immunotherapy and accompany better prognoses 2 , 3 . Thus, an improved understanding of the metabolic strategies that enable tissue residency by T cells could inform new approaches to empower immune responses in tissues and solid tumours. Here, to systematically define the basis for the metabolic reprogramming supporting T RM cell differentiation, survival and function, we leveraged in vivo functional genomics, untargeted metabolomics and transcriptomics of virus-specific memory CD8 + T cell populations. We found that memory CD8 +  T cells deployed a range of adaptations to tissue residency, including reliance on non-steroidal products of the mevalonate–cholesterol pathway, such as coenzyme Q, driven by increased activity of the transcription factor SREBP2. This metabolic adaptation was most pronounced in the small intestine, where T RM cells interface with dietary cholesterol and maintain a heightened state of activation 4 , and was shared by functional tumour-infiltrating lymphocytes in diverse tumour types in mice and humans. Enforcing synthesis of coenzyme Q through deletion of Fdft1 or overexpression of PDSS2 promoted mitochondrial respiration, memory T cell formation following viral infection and enhanced antitumour immunity. In sum, through a systematic exploration of T RM cell metabolism, we reveal how these programs can be leveraged to fuel memory CD8 + T cell formation in the context of acute infections and enhance antitumour immunity. A study describes the metabolic adaptations supporting differentiation, survival and function of tissue-resident memory CD8 + T cells and how to leverage them to enhance immunity against pathogens and tumours.
doi_str_mv 10.1038/s41586-023-06483-w
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Enforcing synthesis of coenzyme Q through deletion of Fdft1 or overexpression of PDSS2 promoted mitochondrial respiration, memory T cell formation following viral infection and enhanced antitumour immunity. In sum, through a systematic exploration of T RM cell metabolism, we reveal how these programs can be leveraged to fuel memory CD8 + T cell formation in the context of acute infections and enhance antitumour immunity. 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Justin ; Hu, Kenneth H. ; Vichaidit, Amy ; Santillano, Natalie ; Boland, Brigid S. ; Chang, John T. ; Jain, Mohit ; Sharma, Sonia ; Krummel, Matthew F. ; Chi, Hongbo ; Bensinger, Steven J. ; Goldrath, Ananda W.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c475t-4927a192ec42cb5f54f89e055edd2000b6d0a548179e23220528f1377595f80b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>13/1</topic><topic>13/109</topic><topic>13/31</topic><topic>14/19</topic><topic>38/39</topic><topic>38/47</topic><topic>38/91</topic><topic>42/41</topic><topic>631/250/2152/1566/1571</topic><topic>631/250/254</topic><topic>631/250/347</topic><topic>631/45/320</topic><topic>631/67/327</topic><topic>64/110</topic><topic>82/58</topic><topic>Adaptation</topic><topic>Animals</topic><topic>CD8 antigen</topic><topic>CD8-Positive T-Lymphocytes - immunology</topic><topic>CD8-Positive T-Lymphocytes - metabolism</topic><topic>Cell differentiation</topic><topic>Cell Respiration</topic><topic>Cell survival</topic><topic>Cholesterol</topic><topic>Cholesterol - metabolism</topic><topic>Cholesterol - pharmacology</topic><topic>Coenzyme Q</topic><topic>CRISPR</topic><topic>Differentiation (biology)</topic><topic>Effector cells</topic><topic>Empowerment</topic><topic>Enzymes</topic><topic>Genes</topic><topic>Genomics</topic><topic>Humanities and Social Sciences</topic><topic>Humans</topic><topic>Immunity</topic><topic>Immunologic Memory</topic><topic>Immunological memory</topic><topic>Immunotherapy</topic><topic>Infections</topic><topic>Intestine</topic><topic>Intestine, Small - drug effects</topic><topic>Intestine, Small - metabolism</topic><topic>Lymphocytes</topic><topic>Lymphocytes T</topic><topic>Lymphocytes, Tumor-Infiltrating - immunology</topic><topic>Lymphocytes, Tumor-Infiltrating - metabolism</topic><topic>Memory cells</topic><topic>Metabolism</topic><topic>Metabolites</topic><topic>Metabolomics</topic><topic>Mevalonic Acid - metabolism</topic><topic>Mice</topic><topic>Mitochondria - metabolism</topic><topic>multidisciplinary</topic><topic>Neoplasms - immunology</topic><topic>Proteins</topic><topic>Science</topic><topic>Science (multidisciplinary)</topic><topic>Small intestine</topic><topic>Solid tumors</topic><topic>Spleen</topic><topic>T cell receptors</topic><topic>Tissues</topic><topic>Transcription factors</topic><topic>Transcriptomics</topic><topic>Tumors</topic><topic>Ubiquinone - metabolism</topic><topic>Viral infections</topic><topic>Virus Diseases - immunology</topic><topic>Viruses - immunology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Reina-Campos, Miguel</creatorcontrib><creatorcontrib>Heeg, Maximilian</creatorcontrib><creatorcontrib>Kennewick, Kelly</creatorcontrib><creatorcontrib>Mathews, Ian T.</creatorcontrib><creatorcontrib>Galletti, Giovanni</creatorcontrib><creatorcontrib>Luna, Vida</creatorcontrib><creatorcontrib>Nguyen, Quynhanh</creatorcontrib><creatorcontrib>Huang, Hongling</creatorcontrib><creatorcontrib>Milner, J. 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Aerospace Collection</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Environmental Science Database</collection><collection>Earth, Atmospheric &amp; Aquatic Science Database</collection><collection>Materials Science Collection</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest One Psychology</collection><collection>Engineering Collection</collection><collection>Environmental Science Collection</collection><collection>ProQuest Central Basic</collection><collection>University of Michigan</collection><collection>Genetics Abstracts</collection><collection>SIRS Editorial</collection><collection>Environment Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Nature (London)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Reina-Campos, Miguel</au><au>Heeg, Maximilian</au><au>Kennewick, Kelly</au><au>Mathews, Ian T.</au><au>Galletti, Giovanni</au><au>Luna, Vida</au><au>Nguyen, Quynhanh</au><au>Huang, Hongling</au><au>Milner, J. Justin</au><au>Hu, Kenneth H.</au><au>Vichaidit, Amy</au><au>Santillano, Natalie</au><au>Boland, Brigid S.</au><au>Chang, John T.</au><au>Jain, Mohit</au><au>Sharma, Sonia</au><au>Krummel, Matthew F.</au><au>Chi, Hongbo</au><au>Bensinger, Steven J.</au><au>Goldrath, Ananda W.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Metabolic programs of T cell tissue residency empower tumour immunity</atitle><jtitle>Nature (London)</jtitle><stitle>Nature</stitle><addtitle>Nature</addtitle><date>2023-09-07</date><risdate>2023</risdate><volume>621</volume><issue>7977</issue><spage>179</spage><epage>187</epage><pages>179-187</pages><issn>0028-0836</issn><issn>1476-4687</issn><eissn>1476-4687</eissn><abstract>Tissue resident memory CD8 + T (T RM ) cells offer rapid and long-term protection at sites of reinfection 1 . Tumour-infiltrating lymphocytes with characteristics of T RM cells maintain enhanced effector functions, predict responses to immunotherapy and accompany better prognoses 2 , 3 . Thus, an improved understanding of the metabolic strategies that enable tissue residency by T cells could inform new approaches to empower immune responses in tissues and solid tumours. Here, to systematically define the basis for the metabolic reprogramming supporting T RM cell differentiation, survival and function, we leveraged in vivo functional genomics, untargeted metabolomics and transcriptomics of virus-specific memory CD8 + T cell populations. We found that memory CD8 +  T cells deployed a range of adaptations to tissue residency, including reliance on non-steroidal products of the mevalonate–cholesterol pathway, such as coenzyme Q, driven by increased activity of the transcription factor SREBP2. This metabolic adaptation was most pronounced in the small intestine, where T RM cells interface with dietary cholesterol and maintain a heightened state of activation 4 , and was shared by functional tumour-infiltrating lymphocytes in diverse tumour types in mice and humans. Enforcing synthesis of coenzyme Q through deletion of Fdft1 or overexpression of PDSS2 promoted mitochondrial respiration, memory T cell formation following viral infection and enhanced antitumour immunity. In sum, through a systematic exploration of T RM cell metabolism, we reveal how these programs can be leveraged to fuel memory CD8 + T cell formation in the context of acute infections and enhance antitumour immunity. A study describes the metabolic adaptations supporting differentiation, survival and function of tissue-resident memory CD8 + T cells and how to leverage them to enhance immunity against pathogens and tumours.</abstract><cop>London</cop><pub>Nature Publishing Group UK</pub><pmid>37648857</pmid><doi>10.1038/s41586-023-06483-w</doi><tpages>9</tpages><orcidid>https://orcid.org/0000-0002-0294-0202</orcidid><orcidid>https://orcid.org/0000-0002-0752-2130</orcidid><orcidid>https://orcid.org/0000-0002-5900-508X</orcidid><orcidid>https://orcid.org/0000-0002-9594-1377</orcidid><orcidid>https://orcid.org/0000-0001-6613-2354</orcidid><orcidid>https://orcid.org/0000-0002-9997-2496</orcidid><orcidid>https://orcid.org/0000-0002-6300-8128</orcidid><orcidid>https://orcid.org/0000-0002-6556-1963</orcidid><orcidid>https://orcid.org/0000-0002-9657-4206</orcidid><orcidid>https://orcid.org/0000-0003-4773-7985</orcidid><orcidid>https://orcid.org/0000-0001-7915-3533</orcidid><oa>free_for_read</oa></addata></record>
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identifier ISSN: 0028-0836
ispartof Nature (London), 2023-09, Vol.621 (7977), p.179-187
issn 0028-0836
1476-4687
1476-4687
language eng
recordid cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_11238873
source MEDLINE; Nature; SpringerLink Journals - AutoHoldings
subjects 13/1
13/109
13/31
14/19
38/39
38/47
38/91
42/41
631/250/2152/1566/1571
631/250/254
631/250/347
631/45/320
631/67/327
64/110
82/58
Adaptation
Animals
CD8 antigen
CD8-Positive T-Lymphocytes - immunology
CD8-Positive T-Lymphocytes - metabolism
Cell differentiation
Cell Respiration
Cell survival
Cholesterol
Cholesterol - metabolism
Cholesterol - pharmacology
Coenzyme Q
CRISPR
Differentiation (biology)
Effector cells
Empowerment
Enzymes
Genes
Genomics
Humanities and Social Sciences
Humans
Immunity
Immunologic Memory
Immunological memory
Immunotherapy
Infections
Intestine
Intestine, Small - drug effects
Intestine, Small - metabolism
Lymphocytes
Lymphocytes T
Lymphocytes, Tumor-Infiltrating - immunology
Lymphocytes, Tumor-Infiltrating - metabolism
Memory cells
Metabolism
Metabolites
Metabolomics
Mevalonic Acid - metabolism
Mice
Mitochondria - metabolism
multidisciplinary
Neoplasms - immunology
Proteins
Science
Science (multidisciplinary)
Small intestine
Solid tumors
Spleen
T cell receptors
Tissues
Transcription factors
Transcriptomics
Tumors
Ubiquinone - metabolism
Viral infections
Virus Diseases - immunology
Viruses - immunology
title Metabolic programs of T cell tissue residency empower tumour immunity
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