Knockdown of Glycolysis-Related LINC01070 Inhibits the Progression of Breast Cancer
Accumulative evidence confirms that glycolysis and long non-coding RNAs (lncRNAs) are closely associated with tumor development. The aim of this study was to construct a novel prognostic model based on glycolysis-related lncRNAs (GRLs) in breast cancer patients. By performing Pearson correlation ana...
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Veröffentlicht in: | Curēus (Palo Alto, CA) CA), 2024-05, Vol.16 (5), p.e60093-e60093 |
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description | Accumulative evidence confirms that glycolysis and long non-coding RNAs (lncRNAs) are closely associated with tumor development. The aim of this study was to construct a novel prognostic model based on glycolysis-related lncRNAs (GRLs) in breast cancer patients. By performing Pearson correlation analysis and Lasso regression analysis on differentially expressed genes and lncRNAs associated with glycolysis in the Cancer Genome Atlas (TCGA) and Gene Set Enrichment Analysis (GSEA) datasets, we identified nine GRLs and constructed associated prognostic risk signature. Kaplan-Meier survival analysis and univariate and multivariate Cox analysis showed that patients in the low-risk group had a better prognosis. The receiver operator characteristics (ROC) curves showed that the area under the curve (AUC) of the prognostic risk signature predicting patients' overall survival at 1-, 3- and 5- years was 0.78, 0.71, and 0.71, respectively. Moreover, the validation curves also showed that the signature had better diagnostic efficacy and clinical predictive power. Furthermore, clone formation assay, EdU assay, and Transwell assay showed that knockdown of LINC01070 inhibited breast cancer progression. We developed a prognostic risk-associated GRLs signature that can accurately predict the breast cancer patient's prognostic status, and LINC01070 can be used as a potential biomarker for the prognosis of breast cancer patients. |
doi_str_mv | 10.7759/cureus.60093 |
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The aim of this study was to construct a novel prognostic model based on glycolysis-related lncRNAs (GRLs) in breast cancer patients. By performing Pearson correlation analysis and Lasso regression analysis on differentially expressed genes and lncRNAs associated with glycolysis in the Cancer Genome Atlas (TCGA) and Gene Set Enrichment Analysis (GSEA) datasets, we identified nine GRLs and constructed associated prognostic risk signature. Kaplan-Meier survival analysis and univariate and multivariate Cox analysis showed that patients in the low-risk group had a better prognosis. The receiver operator characteristics (ROC) curves showed that the area under the curve (AUC) of the prognostic risk signature predicting patients' overall survival at 1-, 3- and 5- years was 0.78, 0.71, and 0.71, respectively. Moreover, the validation curves also showed that the signature had better diagnostic efficacy and clinical predictive power. Furthermore, clone formation assay, EdU assay, and Transwell assay showed that knockdown of LINC01070 inhibited breast cancer progression. We developed a prognostic risk-associated GRLs signature that can accurately predict the breast cancer patient's prognostic status, and LINC01070 can be used as a potential biomarker for the prognosis of breast cancer patients.</description><identifier>ISSN: 2168-8184</identifier><identifier>EISSN: 2168-8184</identifier><identifier>DOI: 10.7759/cureus.60093</identifier><identifier>PMID: 38860098</identifier><language>eng</language><publisher>United States: Cureus Inc</publisher><subject>Breast cancer ; Energy ; Estrogens ; Genes ; Genomes ; Growth factors ; Medical prognosis ; Metabolism ; Metastasis ; MicroRNAs ; Nomograms ; Oncology ; Regression analysis ; Tumors</subject><ispartof>Curēus (Palo Alto, CA), 2024-05, Vol.16 (5), p.e60093-e60093</ispartof><rights>Copyright © 2024, Hu et al.</rights><rights>Copyright © 2024, Hu et al. This work is published under https://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>Copyright © 2024, Hu et al. 2024 Hu et al.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c300t-375917bc9de8507040c739014bec1489312a7de7728b981930ab39360e144b103</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC11163994/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC11163994/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,27901,27902,53766,53768</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/38860098$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Hu, Qiang</creatorcontrib><creatorcontrib>Wang, Yiduo</creatorcontrib><creatorcontrib>Mao, Weipu</creatorcontrib><title>Knockdown of Glycolysis-Related LINC01070 Inhibits the Progression of Breast Cancer</title><title>Curēus (Palo Alto, CA)</title><addtitle>Cureus</addtitle><description>Accumulative evidence confirms that glycolysis and long non-coding RNAs (lncRNAs) are closely associated with tumor development. The aim of this study was to construct a novel prognostic model based on glycolysis-related lncRNAs (GRLs) in breast cancer patients. By performing Pearson correlation analysis and Lasso regression analysis on differentially expressed genes and lncRNAs associated with glycolysis in the Cancer Genome Atlas (TCGA) and Gene Set Enrichment Analysis (GSEA) datasets, we identified nine GRLs and constructed associated prognostic risk signature. Kaplan-Meier survival analysis and univariate and multivariate Cox analysis showed that patients in the low-risk group had a better prognosis. The receiver operator characteristics (ROC) curves showed that the area under the curve (AUC) of the prognostic risk signature predicting patients' overall survival at 1-, 3- and 5- years was 0.78, 0.71, and 0.71, respectively. Moreover, the validation curves also showed that the signature had better diagnostic efficacy and clinical predictive power. Furthermore, clone formation assay, EdU assay, and Transwell assay showed that knockdown of LINC01070 inhibited breast cancer progression. We developed a prognostic risk-associated GRLs signature that can accurately predict the breast cancer patient's prognostic status, and LINC01070 can be used as a potential biomarker for the prognosis of breast cancer patients.</description><subject>Breast cancer</subject><subject>Energy</subject><subject>Estrogens</subject><subject>Genes</subject><subject>Genomes</subject><subject>Growth factors</subject><subject>Medical prognosis</subject><subject>Metabolism</subject><subject>Metastasis</subject><subject>MicroRNAs</subject><subject>Nomograms</subject><subject>Oncology</subject><subject>Regression analysis</subject><subject>Tumors</subject><issn>2168-8184</issn><issn>2168-8184</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>BENPR</sourceid><recordid>eNpdkUtPwzAQhC0EAlS4cUaRuHAgsI7T2D4hiHhUVIB4nC3H2VJDGhc7AfXfk7aACiev5G9mdzSE7FE45rwvT0zrsQ3HGYBka2Q7oZmIBRXp-sq8RXZDeAUACjwBDptkiwkxl4ht8nhTO_NWus86cqPoqpoZV82CDfEDVrrBMhoObvO5EqJBPbaFbULUjDG69-7FYwjWLYTnHnVoolzXBv0O2RjpKuDu99sjz5cXT_l1PLy7GuRnw9gwgCZmXQDKCyNLFP1uQQqGMwk0LdDQVEhGE81L5DwRhRRUMtAFkywDpGlaUGA9crr0nbbFBEuDdeN1pabeTrSfKaet-vtT27F6cR-KUpoxKdPO4fDbwbv3FkOjJjYYrCpdo2uDYpBlXEKWZB168A99da2vu3wdxZlgfSnmJx0tKeNdCB5Hv9dQUPPG1LIxtWisw_dXE_zCP_2wL3Z_kC0</recordid><startdate>20240511</startdate><enddate>20240511</enddate><creator>Hu, Qiang</creator><creator>Wang, Yiduo</creator><creator>Mao, Weipu</creator><general>Cureus Inc</general><general>Cureus</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>K9.</scope><scope>M0S</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20240511</creationdate><title>Knockdown of Glycolysis-Related LINC01070 Inhibits the Progression of Breast Cancer</title><author>Hu, Qiang ; Wang, Yiduo ; Mao, Weipu</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c300t-375917bc9de8507040c739014bec1489312a7de7728b981930ab39360e144b103</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Breast cancer</topic><topic>Energy</topic><topic>Estrogens</topic><topic>Genes</topic><topic>Genomes</topic><topic>Growth factors</topic><topic>Medical prognosis</topic><topic>Metabolism</topic><topic>Metastasis</topic><topic>MicroRNAs</topic><topic>Nomograms</topic><topic>Oncology</topic><topic>Regression analysis</topic><topic>Tumors</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Hu, Qiang</creatorcontrib><creatorcontrib>Wang, Yiduo</creatorcontrib><creatorcontrib>Mao, Weipu</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Curēus (Palo Alto, CA)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Hu, Qiang</au><au>Wang, Yiduo</au><au>Mao, Weipu</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Knockdown of Glycolysis-Related LINC01070 Inhibits the Progression of Breast Cancer</atitle><jtitle>Curēus (Palo Alto, CA)</jtitle><addtitle>Cureus</addtitle><date>2024-05-11</date><risdate>2024</risdate><volume>16</volume><issue>5</issue><spage>e60093</spage><epage>e60093</epage><pages>e60093-e60093</pages><issn>2168-8184</issn><eissn>2168-8184</eissn><abstract>Accumulative evidence confirms that glycolysis and long non-coding RNAs (lncRNAs) are closely associated with tumor development. The aim of this study was to construct a novel prognostic model based on glycolysis-related lncRNAs (GRLs) in breast cancer patients. By performing Pearson correlation analysis and Lasso regression analysis on differentially expressed genes and lncRNAs associated with glycolysis in the Cancer Genome Atlas (TCGA) and Gene Set Enrichment Analysis (GSEA) datasets, we identified nine GRLs and constructed associated prognostic risk signature. Kaplan-Meier survival analysis and univariate and multivariate Cox analysis showed that patients in the low-risk group had a better prognosis. The receiver operator characteristics (ROC) curves showed that the area under the curve (AUC) of the prognostic risk signature predicting patients' overall survival at 1-, 3- and 5- years was 0.78, 0.71, and 0.71, respectively. Moreover, the validation curves also showed that the signature had better diagnostic efficacy and clinical predictive power. Furthermore, clone formation assay, EdU assay, and Transwell assay showed that knockdown of LINC01070 inhibited breast cancer progression. We developed a prognostic risk-associated GRLs signature that can accurately predict the breast cancer patient's prognostic status, and LINC01070 can be used as a potential biomarker for the prognosis of breast cancer patients.</abstract><cop>United States</cop><pub>Cureus Inc</pub><pmid>38860098</pmid><doi>10.7759/cureus.60093</doi><oa>free_for_read</oa></addata></record> |
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subjects | Breast cancer Energy Estrogens Genes Genomes Growth factors Medical prognosis Metabolism Metastasis MicroRNAs Nomograms Oncology Regression analysis Tumors |
title | Knockdown of Glycolysis-Related LINC01070 Inhibits the Progression of Breast Cancer |
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