The secreted micropeptide C4orf48 enhances renal fibrosis via an RNA-binding mechanism
Renal interstitial fibrosis is an important mechanism in the progression of chronic kidney disease (CKD) to end-stage kidney disease. However, we lack specific treatments to slow or halt renal fibrosis. Ribosome profiling identified upregulation of a secreted micropeptide, C4orf48 (Cf48), in mouse d...
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Veröffentlicht in: | The Journal of clinical investigation 2024-05, Vol.134 (10), p.1-18 |
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creator | Yang, Jiayi Zhuang, Hongjie Li, Jinhua Nunez-Nescolarde, Ana B Luo, Ning Chen, Huiting Li, Andy Qu, Xinli Wang, Qing Fan, Jinjin Bai, Xiaoyan Ye, Zhiming Gu, Bing Meng, Yue Zhang, Xingyuan Wu, Di Sia, Youyang Jiang, Xiaoyun Chen, Wei Combes, Alexander N Nikolic-Paterson, David J Yu, Xueqing |
description | Renal interstitial fibrosis is an important mechanism in the progression of chronic kidney disease (CKD) to end-stage kidney disease. However, we lack specific treatments to slow or halt renal fibrosis. Ribosome profiling identified upregulation of a secreted micropeptide, C4orf48 (Cf48), in mouse diabetic nephropathy. Cf48 RNA and protein levels were upregulated in tubular epithelial cells in human and experimental CKD. Serum Cf48 levels were increased in human CKD and correlated with loss of kidney function, increasing CKD stage, and the degree of active interstitial fibrosis. Cf48 overexpression in mice accelerated renal fibrosis, while Cf48 gene deletion or knockdown by antisense oligonucleotides significantly reduced renal fibrosis in CKD models. In vitro, recombinant Cf48 (rCf48) enhanced TGF-β1-induced fibrotic responses in renal fibroblasts and epithelial cells independent of Smad3 phosphorylation. Cellular uptake of Cf48 and its pro-fibrotic response in fibroblasts operated via the transferrin receptor. RNA immunoprecipitation-sequencing identified Cf48 binding to mRNA of genes involved in the fibrotic response, including Serpine1, Acta2, Ccn2, and Col4a1. rCf48 binds to the 3'-untranslated region of Serpine1 and increases mRNA half-life. We identify the secreted Cf48 micropeptide as a potential enhancer of renal fibrosis which operates as an RNA-binding peptide to promote the production of extracellular matrix. |
doi_str_mv | 10.1172/JCI178392 |
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However, we lack specific treatments to slow or halt renal fibrosis. Ribosome profiling identified upregulation of a secreted micropeptide, C4orf48 (Cf48), in mouse diabetic nephropathy. Cf48 RNA and protein levels were upregulated in tubular epithelial cells in human and experimental CKD. Serum Cf48 levels were increased in human CKD and correlated with loss of kidney function, increasing CKD stage, and the degree of active interstitial fibrosis. Cf48 overexpression in mice accelerated renal fibrosis, while Cf48 gene deletion or knockdown by antisense oligonucleotides significantly reduced renal fibrosis in CKD models. In vitro, recombinant Cf48 (rCf48) enhanced TGF-β1-induced fibrotic responses in renal fibroblasts and epithelial cells independent of Smad3 phosphorylation. Cellular uptake of Cf48 and its pro-fibrotic response in fibroblasts operated via the transferrin receptor. RNA immunoprecipitation-sequencing identified Cf48 binding to mRNA of genes involved in the fibrotic response, including Serpine1, Acta2, Ccn2, and Col4a1. rCf48 binds to the 3'-untranslated region of Serpine1 and increases mRNA half-life. We identify the secreted Cf48 micropeptide as a potential enhancer of renal fibrosis which operates as an RNA-binding peptide to promote the production of extracellular matrix.</description><identifier>ISSN: 1558-8238</identifier><identifier>ISSN: 0021-9738</identifier><identifier>EISSN: 1558-8238</identifier><identifier>DOI: 10.1172/JCI178392</identifier><identifier>PMID: 38625739</identifier><language>eng</language><publisher>United States: American Society for Clinical Investigation</publisher><subject>3' Untranslated regions ; Amino acids ; Analysis ; Antisense oligonucleotides ; Binding proteins ; Chronic kidney failure ; Connective tissue growth factor ; Development and progression ; Diabetes ; Diabetes mellitus ; Diabetic nephropathies ; Diabetic nephropathy ; End-stage renal disease ; Epithelial cells ; Extracellular matrix ; Fibroblasts ; Fibrosis ; Gene deletion ; Genes ; Health aspects ; Hypertension ; Identification and classification ; Immunoprecipitation ; Kidney diseases ; Messenger RNA ; mRNA ; mRNA stability ; Nephropathy ; Peptides ; Phosphorylation ; Protein expression ; Proteins ; Ribonucleic acid ; Risk factors ; RNA ; Smad3 protein ; Structure ; Transforming growth factor-b1 ; Transforming growth factors ; Type 2 diabetes</subject><ispartof>The Journal of clinical investigation, 2024-05, Vol.134 (10), p.1-18</ispartof><rights>COPYRIGHT 2024 American Society for Clinical Investigation</rights><rights>Copyright American Society for Clinical Investigation May 2024</rights><rights>2024 Yang et al. 2024 Yang et al.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c568t-374282e56e5573998ecfff104f8cc0373d935d976707d89632f245179f210af33</cites><orcidid>0000-0001-6631-3761</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC11093611/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC11093611/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,27903,27904,53769,53771</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/38625739$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Yang, Jiayi</creatorcontrib><creatorcontrib>Zhuang, Hongjie</creatorcontrib><creatorcontrib>Li, Jinhua</creatorcontrib><creatorcontrib>Nunez-Nescolarde, Ana B</creatorcontrib><creatorcontrib>Luo, Ning</creatorcontrib><creatorcontrib>Chen, Huiting</creatorcontrib><creatorcontrib>Li, Andy</creatorcontrib><creatorcontrib>Qu, Xinli</creatorcontrib><creatorcontrib>Wang, Qing</creatorcontrib><creatorcontrib>Fan, Jinjin</creatorcontrib><creatorcontrib>Bai, Xiaoyan</creatorcontrib><creatorcontrib>Ye, Zhiming</creatorcontrib><creatorcontrib>Gu, Bing</creatorcontrib><creatorcontrib>Meng, Yue</creatorcontrib><creatorcontrib>Zhang, Xingyuan</creatorcontrib><creatorcontrib>Wu, Di</creatorcontrib><creatorcontrib>Sia, Youyang</creatorcontrib><creatorcontrib>Jiang, Xiaoyun</creatorcontrib><creatorcontrib>Chen, Wei</creatorcontrib><creatorcontrib>Combes, Alexander N</creatorcontrib><creatorcontrib>Nikolic-Paterson, David J</creatorcontrib><creatorcontrib>Yu, Xueqing</creatorcontrib><title>The secreted micropeptide C4orf48 enhances renal fibrosis via an RNA-binding mechanism</title><title>The Journal of clinical investigation</title><addtitle>J Clin Invest</addtitle><description>Renal interstitial fibrosis is an important mechanism in the progression of chronic kidney disease (CKD) to end-stage kidney disease. However, we lack specific treatments to slow or halt renal fibrosis. Ribosome profiling identified upregulation of a secreted micropeptide, C4orf48 (Cf48), in mouse diabetic nephropathy. Cf48 RNA and protein levels were upregulated in tubular epithelial cells in human and experimental CKD. Serum Cf48 levels were increased in human CKD and correlated with loss of kidney function, increasing CKD stage, and the degree of active interstitial fibrosis. Cf48 overexpression in mice accelerated renal fibrosis, while Cf48 gene deletion or knockdown by antisense oligonucleotides significantly reduced renal fibrosis in CKD models. In vitro, recombinant Cf48 (rCf48) enhanced TGF-β1-induced fibrotic responses in renal fibroblasts and epithelial cells independent of Smad3 phosphorylation. Cellular uptake of Cf48 and its pro-fibrotic response in fibroblasts operated via the transferrin receptor. RNA immunoprecipitation-sequencing identified Cf48 binding to mRNA of genes involved in the fibrotic response, including Serpine1, Acta2, Ccn2, and Col4a1. rCf48 binds to the 3'-untranslated region of Serpine1 and increases mRNA half-life. We identify the secreted Cf48 micropeptide as a potential enhancer of renal fibrosis which operates as an RNA-binding peptide to promote the production of extracellular matrix.</description><subject>3' Untranslated regions</subject><subject>Amino acids</subject><subject>Analysis</subject><subject>Antisense oligonucleotides</subject><subject>Binding proteins</subject><subject>Chronic kidney failure</subject><subject>Connective tissue growth factor</subject><subject>Development and progression</subject><subject>Diabetes</subject><subject>Diabetes mellitus</subject><subject>Diabetic nephropathies</subject><subject>Diabetic nephropathy</subject><subject>End-stage renal disease</subject><subject>Epithelial cells</subject><subject>Extracellular matrix</subject><subject>Fibroblasts</subject><subject>Fibrosis</subject><subject>Gene deletion</subject><subject>Genes</subject><subject>Health aspects</subject><subject>Hypertension</subject><subject>Identification and classification</subject><subject>Immunoprecipitation</subject><subject>Kidney diseases</subject><subject>Messenger RNA</subject><subject>mRNA</subject><subject>mRNA stability</subject><subject>Nephropathy</subject><subject>Peptides</subject><subject>Phosphorylation</subject><subject>Protein expression</subject><subject>Proteins</subject><subject>Ribonucleic acid</subject><subject>Risk factors</subject><subject>RNA</subject><subject>Smad3 protein</subject><subject>Structure</subject><subject>Transforming growth factor-b1</subject><subject>Transforming growth factors</subject><subject>Type 2 diabetes</subject><issn>1558-8238</issn><issn>0021-9738</issn><issn>1558-8238</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNqNkl1rFDEUhgdRbK1e-AdkQBC9mJqvmSRXsix-rBQLtfY2ZDMnMykzyZrMFP33ZrGuu7IXkkBC8pw3h7xvUTzH6BxjTt5-Xq4wF1SSB8UprmtRCULFw739SfEkpVuEMGM1e1ycUNGQmlN5Wtxc91AmMBEmaMvRmRg2sJlcC-WShWiZKMH32htIZQSvh9K6dQzJpfLO6VL78urLolo73zrflSOYzLo0Pi0eWT0keHa_nhXfPry_Xn6qLi4_rpaLi8rUjZgqyhkRBOoG6m07UoCx1mLErDAGUU5bSetW8oYj3grZUGIJqzGXlmCkLaVnxbvfupt5PUJrwE9RD2oT3ajjTxW0U4c33vWqC3cKYyRpg3FWeH2vEMP3GdKkRpcMDIP2EOakKKJSIMEIyejLf9DbMMf8J1uqYRyRPP9SnR5AOW9DfthsRdWCy7rBHDOZqeoI1YGH3GXwYF0-PuDPj_B5tJBNO1rw5qAgMxP8mDo9p6RWX6_-n728OWRf7bE96GHqUxjmyQWfjormSKUUwe5cwUhtY6t2sc3si30bd-SfnNJfcTXhOw</recordid><startdate>20240515</startdate><enddate>20240515</enddate><creator>Yang, 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C4orf48 enhances renal fibrosis via an RNA-binding mechanism</title><author>Yang, Jiayi ; Zhuang, Hongjie ; Li, Jinhua ; Nunez-Nescolarde, Ana B ; Luo, Ning ; Chen, Huiting ; Li, Andy ; Qu, Xinli ; Wang, Qing ; Fan, Jinjin ; Bai, Xiaoyan ; Ye, Zhiming ; Gu, Bing ; Meng, Yue ; Zhang, Xingyuan ; Wu, Di ; Sia, Youyang ; Jiang, Xiaoyun ; Chen, Wei ; Combes, Alexander N ; Nikolic-Paterson, David J ; Yu, Xueqing</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c568t-374282e56e5573998ecfff104f8cc0373d935d976707d89632f245179f210af33</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>3' Untranslated regions</topic><topic>Amino acids</topic><topic>Analysis</topic><topic>Antisense oligonucleotides</topic><topic>Binding proteins</topic><topic>Chronic kidney failure</topic><topic>Connective tissue growth factor</topic><topic>Development and progression</topic><topic>Diabetes</topic><topic>Diabetes mellitus</topic><topic>Diabetic nephropathies</topic><topic>Diabetic nephropathy</topic><topic>End-stage renal disease</topic><topic>Epithelial cells</topic><topic>Extracellular matrix</topic><topic>Fibroblasts</topic><topic>Fibrosis</topic><topic>Gene deletion</topic><topic>Genes</topic><topic>Health aspects</topic><topic>Hypertension</topic><topic>Identification and classification</topic><topic>Immunoprecipitation</topic><topic>Kidney diseases</topic><topic>Messenger RNA</topic><topic>mRNA</topic><topic>mRNA stability</topic><topic>Nephropathy</topic><topic>Peptides</topic><topic>Phosphorylation</topic><topic>Protein expression</topic><topic>Proteins</topic><topic>Ribonucleic acid</topic><topic>Risk factors</topic><topic>RNA</topic><topic>Smad3 protein</topic><topic>Structure</topic><topic>Transforming growth factor-b1</topic><topic>Transforming growth factors</topic><topic>Type 2 diabetes</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Yang, Jiayi</creatorcontrib><creatorcontrib>Zhuang, Hongjie</creatorcontrib><creatorcontrib>Li, Jinhua</creatorcontrib><creatorcontrib>Nunez-Nescolarde, Ana B</creatorcontrib><creatorcontrib>Luo, Ning</creatorcontrib><creatorcontrib>Chen, Huiting</creatorcontrib><creatorcontrib>Li, Andy</creatorcontrib><creatorcontrib>Qu, Xinli</creatorcontrib><creatorcontrib>Wang, Qing</creatorcontrib><creatorcontrib>Fan, Jinjin</creatorcontrib><creatorcontrib>Bai, Xiaoyan</creatorcontrib><creatorcontrib>Ye, Zhiming</creatorcontrib><creatorcontrib>Gu, Bing</creatorcontrib><creatorcontrib>Meng, Yue</creatorcontrib><creatorcontrib>Zhang, Xingyuan</creatorcontrib><creatorcontrib>Wu, Di</creatorcontrib><creatorcontrib>Sia, Youyang</creatorcontrib><creatorcontrib>Jiang, Xiaoyun</creatorcontrib><creatorcontrib>Chen, Wei</creatorcontrib><creatorcontrib>Combes, Alexander 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Di</au><au>Sia, Youyang</au><au>Jiang, Xiaoyun</au><au>Chen, Wei</au><au>Combes, Alexander N</au><au>Nikolic-Paterson, David J</au><au>Yu, Xueqing</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The secreted micropeptide C4orf48 enhances renal fibrosis via an RNA-binding mechanism</atitle><jtitle>The Journal of clinical investigation</jtitle><addtitle>J Clin Invest</addtitle><date>2024-05-15</date><risdate>2024</risdate><volume>134</volume><issue>10</issue><spage>1</spage><epage>18</epage><pages>1-18</pages><issn>1558-8238</issn><issn>0021-9738</issn><eissn>1558-8238</eissn><abstract>Renal interstitial fibrosis is an important mechanism in the progression of chronic kidney disease (CKD) to end-stage kidney disease. However, we lack specific treatments to slow or halt renal fibrosis. Ribosome profiling identified upregulation of a secreted micropeptide, C4orf48 (Cf48), in mouse diabetic nephropathy. Cf48 RNA and protein levels were upregulated in tubular epithelial cells in human and experimental CKD. Serum Cf48 levels were increased in human CKD and correlated with loss of kidney function, increasing CKD stage, and the degree of active interstitial fibrosis. Cf48 overexpression in mice accelerated renal fibrosis, while Cf48 gene deletion or knockdown by antisense oligonucleotides significantly reduced renal fibrosis in CKD models. In vitro, recombinant Cf48 (rCf48) enhanced TGF-β1-induced fibrotic responses in renal fibroblasts and epithelial cells independent of Smad3 phosphorylation. Cellular uptake of Cf48 and its pro-fibrotic response in fibroblasts operated via the transferrin receptor. RNA immunoprecipitation-sequencing identified Cf48 binding to mRNA of genes involved in the fibrotic response, including Serpine1, Acta2, Ccn2, and Col4a1. rCf48 binds to the 3'-untranslated region of Serpine1 and increases mRNA half-life. We identify the secreted Cf48 micropeptide as a potential enhancer of renal fibrosis which operates as an RNA-binding peptide to promote the production of extracellular matrix.</abstract><cop>United States</cop><pub>American Society for Clinical Investigation</pub><pmid>38625739</pmid><doi>10.1172/JCI178392</doi><tpages>18</tpages><orcidid>https://orcid.org/0000-0001-6631-3761</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | 3' Untranslated regions Amino acids Analysis Antisense oligonucleotides Binding proteins Chronic kidney failure Connective tissue growth factor Development and progression Diabetes Diabetes mellitus Diabetic nephropathies Diabetic nephropathy End-stage renal disease Epithelial cells Extracellular matrix Fibroblasts Fibrosis Gene deletion Genes Health aspects Hypertension Identification and classification Immunoprecipitation Kidney diseases Messenger RNA mRNA mRNA stability Nephropathy Peptides Phosphorylation Protein expression Proteins Ribonucleic acid Risk factors RNA Smad3 protein Structure Transforming growth factor-b1 Transforming growth factors Type 2 diabetes |
title | The secreted micropeptide C4orf48 enhances renal fibrosis via an RNA-binding mechanism |
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