Limits of economy and fidelity for programmable assembly of size-controlled triply periodic polyhedra
We propose and investigate an extension of the Caspar-Klug symmetry principles for viral capsid assembly to the programmable assembly of size-controlled triply periodic polyhedra, discrete variants of the Primitive, Diamond, and Gyroid cubic minimal surfaces. Inspired by a recent class of programmab...
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Veröffentlicht in: | Proceedings of the National Academy of Sciences - PNAS 2024-04, Vol.121 (18), p.e2315648121 |
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creator | Duque, Carlos M Hall, Douglas M Tyukodi, Botond Hagan, Michael F Santangelo, Christian D Grason, Gregory M |
description | We propose and investigate an extension of the Caspar-Klug symmetry principles for viral capsid assembly to the programmable assembly of size-controlled triply periodic polyhedra, discrete variants of the Primitive, Diamond, and Gyroid cubic minimal surfaces. Inspired by a recent class of programmable DNA origami colloids, we demonstrate that the economy of design in these crystalline assemblies-in terms of the growth of the number of distinct particle species required with the increased size-scale (e.g., periodicity)-is comparable to viral shells. We further test the role of geometric specificity in these assemblies via dynamical assembly simulations, which show that conditions for simultaneously efficient and high-fidelity assembly require an intermediate degree of flexibility of local angles and lengths in programmed assembly. Off-target misassembly occurs via incorporation of a variant of disclination defects, generalized to the case of hyperbolic crystals. The possibility of these topological defects is a direct consequence of the very same symmetry principles that underlie the economical design, exposing a basic tradeoff between design economy and fidelity of programmable, size controlled assembly. |
doi_str_mv | 10.1073/pnas.2315648121 |
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Inspired by a recent class of programmable DNA origami colloids, we demonstrate that the economy of design in these crystalline assemblies-in terms of the growth of the number of distinct particle species required with the increased size-scale (e.g., periodicity)-is comparable to viral shells. We further test the role of geometric specificity in these assemblies via dynamical assembly simulations, which show that conditions for simultaneously efficient and high-fidelity assembly require an intermediate degree of flexibility of local angles and lengths in programmed assembly. Off-target misassembly occurs via incorporation of a variant of disclination defects, generalized to the case of hyperbolic crystals. 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subjects | Accuracy Angles (geometry) Assemblies Assembly Biological Sciences Colloids Crystal defects Crystals Design Economics Fidelity Minimal surfaces Periodicity Physical Sciences Polyhedra Principles Symmetry |
title | Limits of economy and fidelity for programmable assembly of size-controlled triply periodic polyhedra |
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