Integrated analysis reveals the potential of cluster of differentiation 86 as a key biomarker in high-grade glioma
This study aimed to evaluate the potential of cluster of differentiation 86 (CD86) as a biomarker in high-grade glioma (HGG). The TCGA and TCIA databases were used to obtain the CD86 expression value, clinical data, and MRI images of HGG patients. Prognostic values were assessed by the Kaplan-Meier...
Gespeichert in:
Veröffentlicht in: | Aging (Albany, NY.) NY.), 2023-12, Vol.15 (24), p.15402-15418 |
---|---|
Hauptverfasser: | , , , , , , , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | 15418 |
---|---|
container_issue | 24 |
container_start_page | 15402 |
container_title | Aging (Albany, NY.) |
container_volume | 15 |
creator | Wen, Xuebin Wang, Chaochao Pan, Zhihao Jin, Yao Wang, Hongcai Zhou, Jiang Sun, Chengfeng Ye, Gengfan Chen, Maosong |
description | This study aimed to evaluate the potential of cluster of differentiation 86 (CD86) as a biomarker in high-grade glioma (HGG). The TCGA and TCIA databases were used to obtain the CD86 expression value, clinical data, and MRI images of HGG patients. Prognostic values were assessed by the Kaplan-Meier method, Receiver operating characteristic curve (ROC), Cox regression, logistic regression, and nomogram analyses. CD86-associated pathways were also explored. We found that CD86 was significantly upregulated in HGG compared with the normal group. Survival analysis showed a significant association between CD86 high expression and shorter overall survival time. Its independent prognostic value was also confirmed. These results suggested the possibility of CD86 as a biomarker in HGG. We also innovatively established 2 radiomics models with Support Vector Machine (SVM) and Logistic regression (LR) algorithms to predict the CD86 expression. The 2 models containing 5 optimal features by SVM and LR methods showed similar favorable performance in predicting CD86 expression in the training set, and their performance were also confirmed in validation set. These results indicated the successful construction of a radiomics model for non-invasively predicting biomarker in HGG. Finally, pathway analysis indicated that CD86 might be involved in the natural killer cell-mediated cytotoxicity in HGG progression. |
doi_str_mv | 10.18632/aging.205359 |
format | Article |
fullrecord | <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_10781505</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2908124022</sourcerecordid><originalsourceid>FETCH-LOGICAL-c344t-96956348c3068720af9abad8142545bcec34cd2c3343121975d97584aea941de3</originalsourceid><addsrcrecordid>eNpVkc1rGzEQxUVoyYeTY69Fx1421edaOpUS0iYQyCU9i7F2dq16vXIlOeD_PoqdmPQgNPB-vBneI-QLZ9fctFJ8hyFMw7VgWmp7Qs65VbpR2thPH-YzcpHzX8ZarVV7Ss6k4VpxNj8n6X4qOCQo2FGYYNzlkGnCZ4Qx07JEuokFpxJgpLGnftzmgul17ELfY9pLJcSJmpZCpkBXuKOLENeQVhUME12GYdnUDR3SYXwVLsnnvrrj1ds_I39-3T7d3DUPj7_vb34-NF4qVRrbWt1KZbxkrZkLBr2FBXSGK6GVXnismO-El1JJLrid664-owDBKt6hnJEfB9_NdrHGztdbE4xuk0I9buciBPe_MoWlG-Kzq8HUfGqgM_LtzSHFf1vMxa1D9jiOMGHcZicsM1woJkRFmwPqU8w5YX_cw5nbF-X2RblDUZX_-vG4I_3ejHwB4F-Q_g</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2908124022</pqid></control><display><type>article</type><title>Integrated analysis reveals the potential of cluster of differentiation 86 as a key biomarker in high-grade glioma</title><source>MEDLINE</source><source>Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals</source><source>PubMed Central Open Access</source><source>PubMed Central</source><creator>Wen, Xuebin ; Wang, Chaochao ; Pan, Zhihao ; Jin, Yao ; Wang, Hongcai ; Zhou, Jiang ; Sun, Chengfeng ; Ye, Gengfan ; Chen, Maosong</creator><creatorcontrib>Wen, Xuebin ; Wang, Chaochao ; Pan, Zhihao ; Jin, Yao ; Wang, Hongcai ; Zhou, Jiang ; Sun, Chengfeng ; Ye, Gengfan ; Chen, Maosong</creatorcontrib><description>This study aimed to evaluate the potential of cluster of differentiation 86 (CD86) as a biomarker in high-grade glioma (HGG). The TCGA and TCIA databases were used to obtain the CD86 expression value, clinical data, and MRI images of HGG patients. Prognostic values were assessed by the Kaplan-Meier method, Receiver operating characteristic curve (ROC), Cox regression, logistic regression, and nomogram analyses. CD86-associated pathways were also explored. We found that CD86 was significantly upregulated in HGG compared with the normal group. Survival analysis showed a significant association between CD86 high expression and shorter overall survival time. Its independent prognostic value was also confirmed. These results suggested the possibility of CD86 as a biomarker in HGG. We also innovatively established 2 radiomics models with Support Vector Machine (SVM) and Logistic regression (LR) algorithms to predict the CD86 expression. The 2 models containing 5 optimal features by SVM and LR methods showed similar favorable performance in predicting CD86 expression in the training set, and their performance were also confirmed in validation set. These results indicated the successful construction of a radiomics model for non-invasively predicting biomarker in HGG. Finally, pathway analysis indicated that CD86 might be involved in the natural killer cell-mediated cytotoxicity in HGG progression.</description><identifier>ISSN: 1945-4589</identifier><identifier>EISSN: 1945-4589</identifier><identifier>DOI: 10.18632/aging.205359</identifier><identifier>PMID: 38154107</identifier><language>eng</language><publisher>United States: Impact Journals</publisher><subject>Biomarkers ; Brain Neoplasms - diagnostic imaging ; Brain Neoplasms - genetics ; Glioma - diagnostic imaging ; Glioma - genetics ; Humans ; Magnetic Resonance Imaging - methods ; Research Paper ; Retrospective Studies</subject><ispartof>Aging (Albany, NY.), 2023-12, Vol.15 (24), p.15402-15418</ispartof><rights>Copyright: © 2023 Wen et al.</rights><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c344t-96956348c3068720af9abad8142545bcec34cd2c3343121975d97584aea941de3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC10781505/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC10781505/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,724,777,781,882,27905,27906,53772,53774</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/38154107$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Wen, Xuebin</creatorcontrib><creatorcontrib>Wang, Chaochao</creatorcontrib><creatorcontrib>Pan, Zhihao</creatorcontrib><creatorcontrib>Jin, Yao</creatorcontrib><creatorcontrib>Wang, Hongcai</creatorcontrib><creatorcontrib>Zhou, Jiang</creatorcontrib><creatorcontrib>Sun, Chengfeng</creatorcontrib><creatorcontrib>Ye, Gengfan</creatorcontrib><creatorcontrib>Chen, Maosong</creatorcontrib><title>Integrated analysis reveals the potential of cluster of differentiation 86 as a key biomarker in high-grade glioma</title><title>Aging (Albany, NY.)</title><addtitle>Aging (Albany NY)</addtitle><description>This study aimed to evaluate the potential of cluster of differentiation 86 (CD86) as a biomarker in high-grade glioma (HGG). The TCGA and TCIA databases were used to obtain the CD86 expression value, clinical data, and MRI images of HGG patients. Prognostic values were assessed by the Kaplan-Meier method, Receiver operating characteristic curve (ROC), Cox regression, logistic regression, and nomogram analyses. CD86-associated pathways were also explored. We found that CD86 was significantly upregulated in HGG compared with the normal group. Survival analysis showed a significant association between CD86 high expression and shorter overall survival time. Its independent prognostic value was also confirmed. These results suggested the possibility of CD86 as a biomarker in HGG. We also innovatively established 2 radiomics models with Support Vector Machine (SVM) and Logistic regression (LR) algorithms to predict the CD86 expression. The 2 models containing 5 optimal features by SVM and LR methods showed similar favorable performance in predicting CD86 expression in the training set, and their performance were also confirmed in validation set. These results indicated the successful construction of a radiomics model for non-invasively predicting biomarker in HGG. Finally, pathway analysis indicated that CD86 might be involved in the natural killer cell-mediated cytotoxicity in HGG progression.</description><subject>Biomarkers</subject><subject>Brain Neoplasms - diagnostic imaging</subject><subject>Brain Neoplasms - genetics</subject><subject>Glioma - diagnostic imaging</subject><subject>Glioma - genetics</subject><subject>Humans</subject><subject>Magnetic Resonance Imaging - methods</subject><subject>Research Paper</subject><subject>Retrospective Studies</subject><issn>1945-4589</issn><issn>1945-4589</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpVkc1rGzEQxUVoyYeTY69Fx1421edaOpUS0iYQyCU9i7F2dq16vXIlOeD_PoqdmPQgNPB-vBneI-QLZ9fctFJ8hyFMw7VgWmp7Qs65VbpR2thPH-YzcpHzX8ZarVV7Ss6k4VpxNj8n6X4qOCQo2FGYYNzlkGnCZ4Qx07JEuokFpxJgpLGnftzmgul17ELfY9pLJcSJmpZCpkBXuKOLENeQVhUME12GYdnUDR3SYXwVLsnnvrrj1ds_I39-3T7d3DUPj7_vb34-NF4qVRrbWt1KZbxkrZkLBr2FBXSGK6GVXnismO-El1JJLrid664-owDBKt6hnJEfB9_NdrHGztdbE4xuk0I9buciBPe_MoWlG-Kzq8HUfGqgM_LtzSHFf1vMxa1D9jiOMGHcZicsM1woJkRFmwPqU8w5YX_cw5nbF-X2RblDUZX_-vG4I_3ejHwB4F-Q_g</recordid><startdate>20231226</startdate><enddate>20231226</enddate><creator>Wen, Xuebin</creator><creator>Wang, Chaochao</creator><creator>Pan, Zhihao</creator><creator>Jin, Yao</creator><creator>Wang, Hongcai</creator><creator>Zhou, Jiang</creator><creator>Sun, Chengfeng</creator><creator>Ye, Gengfan</creator><creator>Chen, Maosong</creator><general>Impact Journals</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20231226</creationdate><title>Integrated analysis reveals the potential of cluster of differentiation 86 as a key biomarker in high-grade glioma</title><author>Wen, Xuebin ; Wang, Chaochao ; Pan, Zhihao ; Jin, Yao ; Wang, Hongcai ; Zhou, Jiang ; Sun, Chengfeng ; Ye, Gengfan ; Chen, Maosong</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c344t-96956348c3068720af9abad8142545bcec34cd2c3343121975d97584aea941de3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Biomarkers</topic><topic>Brain Neoplasms - diagnostic imaging</topic><topic>Brain Neoplasms - genetics</topic><topic>Glioma - diagnostic imaging</topic><topic>Glioma - genetics</topic><topic>Humans</topic><topic>Magnetic Resonance Imaging - methods</topic><topic>Research Paper</topic><topic>Retrospective Studies</topic><toplevel>online_resources</toplevel><creatorcontrib>Wen, Xuebin</creatorcontrib><creatorcontrib>Wang, Chaochao</creatorcontrib><creatorcontrib>Pan, Zhihao</creatorcontrib><creatorcontrib>Jin, Yao</creatorcontrib><creatorcontrib>Wang, Hongcai</creatorcontrib><creatorcontrib>Zhou, Jiang</creatorcontrib><creatorcontrib>Sun, Chengfeng</creatorcontrib><creatorcontrib>Ye, Gengfan</creatorcontrib><creatorcontrib>Chen, Maosong</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Aging (Albany, NY.)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Wen, Xuebin</au><au>Wang, Chaochao</au><au>Pan, Zhihao</au><au>Jin, Yao</au><au>Wang, Hongcai</au><au>Zhou, Jiang</au><au>Sun, Chengfeng</au><au>Ye, Gengfan</au><au>Chen, Maosong</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Integrated analysis reveals the potential of cluster of differentiation 86 as a key biomarker in high-grade glioma</atitle><jtitle>Aging (Albany, NY.)</jtitle><addtitle>Aging (Albany NY)</addtitle><date>2023-12-26</date><risdate>2023</risdate><volume>15</volume><issue>24</issue><spage>15402</spage><epage>15418</epage><pages>15402-15418</pages><issn>1945-4589</issn><eissn>1945-4589</eissn><abstract>This study aimed to evaluate the potential of cluster of differentiation 86 (CD86) as a biomarker in high-grade glioma (HGG). The TCGA and TCIA databases were used to obtain the CD86 expression value, clinical data, and MRI images of HGG patients. Prognostic values were assessed by the Kaplan-Meier method, Receiver operating characteristic curve (ROC), Cox regression, logistic regression, and nomogram analyses. CD86-associated pathways were also explored. We found that CD86 was significantly upregulated in HGG compared with the normal group. Survival analysis showed a significant association between CD86 high expression and shorter overall survival time. Its independent prognostic value was also confirmed. These results suggested the possibility of CD86 as a biomarker in HGG. We also innovatively established 2 radiomics models with Support Vector Machine (SVM) and Logistic regression (LR) algorithms to predict the CD86 expression. The 2 models containing 5 optimal features by SVM and LR methods showed similar favorable performance in predicting CD86 expression in the training set, and their performance were also confirmed in validation set. These results indicated the successful construction of a radiomics model for non-invasively predicting biomarker in HGG. Finally, pathway analysis indicated that CD86 might be involved in the natural killer cell-mediated cytotoxicity in HGG progression.</abstract><cop>United States</cop><pub>Impact Journals</pub><pmid>38154107</pmid><doi>10.18632/aging.205359</doi><tpages>17</tpages><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 1945-4589 |
ispartof | Aging (Albany, NY.), 2023-12, Vol.15 (24), p.15402-15418 |
issn | 1945-4589 1945-4589 |
language | eng |
recordid | cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_10781505 |
source | MEDLINE; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; PubMed Central Open Access; PubMed Central |
subjects | Biomarkers Brain Neoplasms - diagnostic imaging Brain Neoplasms - genetics Glioma - diagnostic imaging Glioma - genetics Humans Magnetic Resonance Imaging - methods Research Paper Retrospective Studies |
title | Integrated analysis reveals the potential of cluster of differentiation 86 as a key biomarker in high-grade glioma |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-20T06%3A40%3A20IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Integrated%20analysis%20reveals%20the%20potential%20of%20cluster%20of%20differentiation%2086%20as%20a%20key%20biomarker%20in%20high-grade%20glioma&rft.jtitle=Aging%20(Albany,%20NY.)&rft.au=Wen,%20Xuebin&rft.date=2023-12-26&rft.volume=15&rft.issue=24&rft.spage=15402&rft.epage=15418&rft.pages=15402-15418&rft.issn=1945-4589&rft.eissn=1945-4589&rft_id=info:doi/10.18632/aging.205359&rft_dat=%3Cproquest_pubme%3E2908124022%3C/proquest_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2908124022&rft_id=info:pmid/38154107&rfr_iscdi=true |