CRISPR-dependent Base Editing Screens Identify Separation of Function Mutants of RADX with Altered RAD51 Regulatory Activity
RAD51 forms nucleoprotein filaments to promote homologous recombination, replication fork reversal, and fork protection. Numerous factors regulate the stability of these filaments and improper regulation leads to genomic instability and ultimately disease including cancer. RADX is a single stranded...
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Veröffentlicht in: | Journal of molecular biology 2023-10, Vol.435 (19), p.168236-168236, Article 168236 |
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container_title | Journal of molecular biology |
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creator | Adolph, Madison B Garje, Atharv S Balakrishnan, Swati Morati, Florian Modesti, Mauro Chazin, Walter J Cortez, David |
description | RAD51 forms nucleoprotein filaments to promote homologous recombination, replication fork reversal, and fork protection. Numerous factors regulate the stability of these filaments and improper regulation leads to genomic instability and ultimately disease including cancer. RADX is a single stranded DNA binding protein that modulates RAD51 filament stability. Here, we utilize a CRISPR-dependent base editing screen to tile mutations across RADX to delineate motifs required for RADX function. We identified separation of function mutants of RADX that bind DNA and RAD51 but have a reduced ability to stimulate its ATP hydrolysis activity. Cells expressing these RADX mutants accumulate RAD51 on chromatin, exhibit replication defects, have reduced growth, accumulate DNA damage, and are hypersensitive to DNA damage and replication stress. These results indicate that RADX must promote RAD51 ATP turnover to regulate RAD51 and genome stability during DNA replication. |
doi_str_mv | 10.1016/j.jmb.2023.168236 |
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Numerous factors regulate the stability of these filaments and improper regulation leads to genomic instability and ultimately disease including cancer. RADX is a single stranded DNA binding protein that modulates RAD51 filament stability. Here, we utilize a CRISPR-dependent base editing screen to tile mutations across RADX to delineate motifs required for RADX function. We identified separation of function mutants of RADX that bind DNA and RAD51 but have a reduced ability to stimulate its ATP hydrolysis activity. Cells expressing these RADX mutants accumulate RAD51 on chromatin, exhibit replication defects, have reduced growth, accumulate DNA damage, and are hypersensitive to DNA damage and replication stress. These results indicate that RADX must promote RAD51 ATP turnover to regulate RAD51 and genome stability during DNA replication.</description><identifier>ISSN: 0022-2836</identifier><identifier>ISSN: 1089-8638</identifier><identifier>EISSN: 1089-8638</identifier><identifier>DOI: 10.1016/j.jmb.2023.168236</identifier><identifier>PMID: 37572935</identifier><language>eng</language><publisher>Netherlands: Elsevier</publisher><subject>Adenosine Triphosphate - metabolism ; Clustered Regularly Interspaced Short Palindromic Repeats ; DNA Replication - genetics ; DNA, Single-Stranded ; Gene Editing ; Genomic Instability - genetics ; Humans ; Life Sciences ; Rad51 Recombinase - genetics ; Rad51 Recombinase - metabolism ; RNA Editing</subject><ispartof>Journal of molecular biology, 2023-10, Vol.435 (19), p.168236-168236, Article 168236</ispartof><rights>Copyright © 2023 Elsevier Ltd. All rights reserved.</rights><rights>Distributed under a Creative Commons Attribution 4.0 International License</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c386t-ad9133132f69f2e4b29e0379adbf17cf918f6d1448112c2a49e876051c626ce73</cites><orcidid>0000-0001-7512-9501 ; 0000-0002-2903-0604 ; 0009-0009-3504-5229 ; 0000-0002-2180-0790 ; 0000-0003-0154-140X ; 0000-0002-4761-7388 ; 0000-0002-4964-331X</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,776,780,881,27903,27904</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/37572935$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://cnrs.hal.science/hal-04267166$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Adolph, Madison B</creatorcontrib><creatorcontrib>Garje, Atharv S</creatorcontrib><creatorcontrib>Balakrishnan, Swati</creatorcontrib><creatorcontrib>Morati, Florian</creatorcontrib><creatorcontrib>Modesti, Mauro</creatorcontrib><creatorcontrib>Chazin, Walter J</creatorcontrib><creatorcontrib>Cortez, David</creatorcontrib><title>CRISPR-dependent Base Editing Screens Identify Separation of Function Mutants of RADX with Altered RAD51 Regulatory Activity</title><title>Journal of molecular biology</title><addtitle>J Mol Biol</addtitle><description>RAD51 forms nucleoprotein filaments to promote homologous recombination, replication fork reversal, and fork protection. Numerous factors regulate the stability of these filaments and improper regulation leads to genomic instability and ultimately disease including cancer. RADX is a single stranded DNA binding protein that modulates RAD51 filament stability. Here, we utilize a CRISPR-dependent base editing screen to tile mutations across RADX to delineate motifs required for RADX function. We identified separation of function mutants of RADX that bind DNA and RAD51 but have a reduced ability to stimulate its ATP hydrolysis activity. Cells expressing these RADX mutants accumulate RAD51 on chromatin, exhibit replication defects, have reduced growth, accumulate DNA damage, and are hypersensitive to DNA damage and replication stress. These results indicate that RADX must promote RAD51 ATP turnover to regulate RAD51 and genome stability during DNA replication.</description><subject>Adenosine Triphosphate - metabolism</subject><subject>Clustered Regularly Interspaced Short Palindromic Repeats</subject><subject>DNA Replication - genetics</subject><subject>DNA, Single-Stranded</subject><subject>Gene Editing</subject><subject>Genomic Instability - genetics</subject><subject>Humans</subject><subject>Life Sciences</subject><subject>Rad51 Recombinase - genetics</subject><subject>Rad51 Recombinase - metabolism</subject><subject>RNA Editing</subject><issn>0022-2836</issn><issn>1089-8638</issn><issn>1089-8638</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpdkUGP0zAQhS0EYrsLP4AL8hEOKR47cZwTCmWXrVQEakHiZrnOpHWVJl3bKaq0P56ELivgZOvNe88af4S8AjYFBvLdbrrbr6eccTEFqbiQT8gEmCoSJYV6SiaMcZ5wJeQFuQxhxxjLRKqekwuRZzkvRDYh97PlfPV1mVR4wLbCNtIPJiC9rlx07YaurEdsA52PI1ef6AoPxpvoupZ2Nb3pW_v7_rmPpo1h1Jblxx_0p4tbWjYRPVajkgFd4qZvTOz8iZZD6Oji6QV5Vpsm4MuH84p8v7n-NrtNFl8-zWflIrFCyZiYqgAhQPBaFjXHdM0LZCIvTLWuIbd1AaqWFaSpAuCWm7RAlUuWgZVcWszFFXl_7j306z1WdtjFm0YfvNsbf9KdcfrfSeu2etMdNQwfxrJsbHh7btj-l7stF3rUWMplDlIeYfC-eXjNd3c9hqj3LlhsGtNi1wfNVcYEcJmlgxXOVuu7EDzWj93A9IhY7_SAWI-I9RnxkHn99zKPiT9MxS9h0KJu</recordid><startdate>20231001</startdate><enddate>20231001</enddate><creator>Adolph, Madison B</creator><creator>Garje, Atharv S</creator><creator>Balakrishnan, Swati</creator><creator>Morati, Florian</creator><creator>Modesti, Mauro</creator><creator>Chazin, Walter J</creator><creator>Cortez, David</creator><general>Elsevier</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>1XC</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0001-7512-9501</orcidid><orcidid>https://orcid.org/0000-0002-2903-0604</orcidid><orcidid>https://orcid.org/0009-0009-3504-5229</orcidid><orcidid>https://orcid.org/0000-0002-2180-0790</orcidid><orcidid>https://orcid.org/0000-0003-0154-140X</orcidid><orcidid>https://orcid.org/0000-0002-4761-7388</orcidid><orcidid>https://orcid.org/0000-0002-4964-331X</orcidid></search><sort><creationdate>20231001</creationdate><title>CRISPR-dependent Base Editing Screens Identify Separation of Function Mutants of RADX with Altered RAD51 Regulatory Activity</title><author>Adolph, Madison B ; 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Numerous factors regulate the stability of these filaments and improper regulation leads to genomic instability and ultimately disease including cancer. RADX is a single stranded DNA binding protein that modulates RAD51 filament stability. Here, we utilize a CRISPR-dependent base editing screen to tile mutations across RADX to delineate motifs required for RADX function. We identified separation of function mutants of RADX that bind DNA and RAD51 but have a reduced ability to stimulate its ATP hydrolysis activity. Cells expressing these RADX mutants accumulate RAD51 on chromatin, exhibit replication defects, have reduced growth, accumulate DNA damage, and are hypersensitive to DNA damage and replication stress. 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subjects | Adenosine Triphosphate - metabolism Clustered Regularly Interspaced Short Palindromic Repeats DNA Replication - genetics DNA, Single-Stranded Gene Editing Genomic Instability - genetics Humans Life Sciences Rad51 Recombinase - genetics Rad51 Recombinase - metabolism RNA Editing |
title | CRISPR-dependent Base Editing Screens Identify Separation of Function Mutants of RADX with Altered RAD51 Regulatory Activity |
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