Advances in single-cell metabolomics to unravel cellular heterogeneity in plant biology
Abstract Single-cell metabolomics is a powerful tool that can reveal cellular heterogeneity and can elucidate the mechanisms of biological phenomena in detail. It is a promising approach in studying plants, especially when cellular heterogeneity has an impact on different biological processes. In ad...
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Veröffentlicht in: | Plant physiology (Bethesda) 2023-09, Vol.193 (2), p.949-965 |
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creator | Pandian, Kanchana Matsui, Minami Hankemeier, Thomas Ali, Ahmed Okubo-Kurihara, Emiko |
description | Abstract
Single-cell metabolomics is a powerful tool that can reveal cellular heterogeneity and can elucidate the mechanisms of biological phenomena in detail. It is a promising approach in studying plants, especially when cellular heterogeneity has an impact on different biological processes. In addition, metabolomics, which can be regarded as a detailed phenotypic analysis, is expected to answer previously unrequited questions which will lead to expansion of crop production, increased understanding of resistance to diseases, and in other applications as well. In this review, we will introduce the flow of sample acquisition and single-cell techniques to facilitate the adoption of single-cell metabolomics. Furthermore, the applications of single-cell metabolomics will be summarized and reviewed. |
doi_str_mv | 10.1093/plphys/kiad357 |
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Single-cell metabolomics is a powerful tool that can reveal cellular heterogeneity and can elucidate the mechanisms of biological phenomena in detail. It is a promising approach in studying plants, especially when cellular heterogeneity has an impact on different biological processes. In addition, metabolomics, which can be regarded as a detailed phenotypic analysis, is expected to answer previously unrequited questions which will lead to expansion of crop production, increased understanding of resistance to diseases, and in other applications as well. In this review, we will introduce the flow of sample acquisition and single-cell techniques to facilitate the adoption of single-cell metabolomics. Furthermore, the applications of single-cell metabolomics will be summarized and reviewed.</description><identifier>ISSN: 0032-0889</identifier><identifier>EISSN: 1532-2548</identifier><identifier>DOI: 10.1093/plphys/kiad357</identifier><identifier>PMID: 37338502</identifier><language>eng</language><publisher>US: Oxford University Press</publisher><subject>Topical Review</subject><ispartof>Plant physiology (Bethesda), 2023-09, Vol.193 (2), p.949-965</ispartof><rights>The Author(s) 2023. Published by Oxford University Press on behalf of American Society of Plant Biologists. 2023</rights><rights>The Author(s) 2023. Published by Oxford University Press on behalf of American Society of Plant Biologists.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c425t-bab5273a668d148ea7a1edc1c13dd2cf0199d4f69db483261fc3cd1de743e1f23</citedby><cites>FETCH-LOGICAL-c425t-bab5273a668d148ea7a1edc1c13dd2cf0199d4f69db483261fc3cd1de743e1f23</cites><orcidid>0000-0001-5162-2668 ; 0000-0001-7871-2073 ; 0000-0002-7171-7346 ; 0000-0002-2825-637X ; 0000-0003-2157-4399</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,778,782,883,1581,27907,27908</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/37338502$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Pandian, Kanchana</creatorcontrib><creatorcontrib>Matsui, Minami</creatorcontrib><creatorcontrib>Hankemeier, Thomas</creatorcontrib><creatorcontrib>Ali, Ahmed</creatorcontrib><creatorcontrib>Okubo-Kurihara, Emiko</creatorcontrib><title>Advances in single-cell metabolomics to unravel cellular heterogeneity in plant biology</title><title>Plant physiology (Bethesda)</title><addtitle>Plant Physiol</addtitle><description>Abstract
Single-cell metabolomics is a powerful tool that can reveal cellular heterogeneity and can elucidate the mechanisms of biological phenomena in detail. It is a promising approach in studying plants, especially when cellular heterogeneity has an impact on different biological processes. In addition, metabolomics, which can be regarded as a detailed phenotypic analysis, is expected to answer previously unrequited questions which will lead to expansion of crop production, increased understanding of resistance to diseases, and in other applications as well. In this review, we will introduce the flow of sample acquisition and single-cell techniques to facilitate the adoption of single-cell metabolomics. Furthermore, the applications of single-cell metabolomics will be summarized and reviewed.</description><subject>Topical Review</subject><issn>0032-0889</issn><issn>1532-2548</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><sourceid>TOX</sourceid><recordid>eNqFkc1L7DAUxYM80fFj61K6fC6quUk_Vw8Z_ALBjeIypMntTDRN-pJ2YP57O8wounKVwPmdk3tzCDkDegm05le97ZfrePVupOZ5uUdmkHOWsjyr_pAZpdOdVlV9SI5ifKOUAofsgBzykvMqp2xGXq_1SjqFMTEuicYtLKYKrU06HGTjre-Misngk9EFuUKbbMTRypAsccDgF-jQDOuNu7fSDUljJtNifUL2W2kjnu7OY_Jye_M8v08fn-4e5tePqcpYPqSNbHJWclkUlYasQllKQK1AAdeaqZZCXeusLWrdZBVnBbSKKw0ay4wjtIwfk3_b3H5susmJbgjSij6YToa18NKIn4ozS7HwKwE0hxLqckr4u0sI_v-IcRCdiZstpUM_RsEqVtaMFzWd0MstqoKPMWD79Q5QsalDbOsQuzomw_n36b7wz_-fgIst4Mf-t7APbReaQg</recordid><startdate>20230922</startdate><enddate>20230922</enddate><creator>Pandian, Kanchana</creator><creator>Matsui, Minami</creator><creator>Hankemeier, Thomas</creator><creator>Ali, Ahmed</creator><creator>Okubo-Kurihara, Emiko</creator><general>Oxford University Press</general><scope>TOX</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0001-5162-2668</orcidid><orcidid>https://orcid.org/0000-0001-7871-2073</orcidid><orcidid>https://orcid.org/0000-0002-7171-7346</orcidid><orcidid>https://orcid.org/0000-0002-2825-637X</orcidid><orcidid>https://orcid.org/0000-0003-2157-4399</orcidid></search><sort><creationdate>20230922</creationdate><title>Advances in single-cell metabolomics to unravel cellular heterogeneity in plant biology</title><author>Pandian, Kanchana ; Matsui, Minami ; Hankemeier, Thomas ; Ali, Ahmed ; Okubo-Kurihara, Emiko</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c425t-bab5273a668d148ea7a1edc1c13dd2cf0199d4f69db483261fc3cd1de743e1f23</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Topical Review</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Pandian, Kanchana</creatorcontrib><creatorcontrib>Matsui, Minami</creatorcontrib><creatorcontrib>Hankemeier, Thomas</creatorcontrib><creatorcontrib>Ali, Ahmed</creatorcontrib><creatorcontrib>Okubo-Kurihara, Emiko</creatorcontrib><collection>Oxford Journals Open Access Collection</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Plant physiology (Bethesda)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Pandian, Kanchana</au><au>Matsui, Minami</au><au>Hankemeier, Thomas</au><au>Ali, Ahmed</au><au>Okubo-Kurihara, Emiko</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Advances in single-cell metabolomics to unravel cellular heterogeneity in plant biology</atitle><jtitle>Plant physiology (Bethesda)</jtitle><addtitle>Plant Physiol</addtitle><date>2023-09-22</date><risdate>2023</risdate><volume>193</volume><issue>2</issue><spage>949</spage><epage>965</epage><pages>949-965</pages><issn>0032-0889</issn><eissn>1532-2548</eissn><abstract>Abstract
Single-cell metabolomics is a powerful tool that can reveal cellular heterogeneity and can elucidate the mechanisms of biological phenomena in detail. It is a promising approach in studying plants, especially when cellular heterogeneity has an impact on different biological processes. In addition, metabolomics, which can be regarded as a detailed phenotypic analysis, is expected to answer previously unrequited questions which will lead to expansion of crop production, increased understanding of resistance to diseases, and in other applications as well. In this review, we will introduce the flow of sample acquisition and single-cell techniques to facilitate the adoption of single-cell metabolomics. Furthermore, the applications of single-cell metabolomics will be summarized and reviewed.</abstract><cop>US</cop><pub>Oxford University Press</pub><pmid>37338502</pmid><doi>10.1093/plphys/kiad357</doi><tpages>17</tpages><orcidid>https://orcid.org/0000-0001-5162-2668</orcidid><orcidid>https://orcid.org/0000-0001-7871-2073</orcidid><orcidid>https://orcid.org/0000-0002-7171-7346</orcidid><orcidid>https://orcid.org/0000-0002-2825-637X</orcidid><orcidid>https://orcid.org/0000-0003-2157-4399</orcidid><oa>free_for_read</oa></addata></record> |
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source | Oxford University Press Journals All Titles (1996-Current); EZB-FREE-00999 freely available EZB journals |
subjects | Topical Review |
title | Advances in single-cell metabolomics to unravel cellular heterogeneity in plant biology |
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