Environmental gradients reveal stress hubs pre-dating plant terrestrialization
Plant terrestrialization brought forth the land plants (embryophytes). Embryophytes account for most of the biomass on land and evolved from streptophyte algae in a singular event. Recent advances have unravelled the first full genomes of the closest algal relatives of land plants; among the first s...
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Veröffentlicht in: | Nature plants 2023-09, Vol.9 (9), p.1419-1438 |
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creator | Dadras, Armin Fürst-Jansen, Janine M. R. Darienko, Tatyana Krone, Denis Scholz, Patricia Sun, Siqi Herrfurth, Cornelia Rieseberg, Tim P. Irisarri, Iker Steinkamp, Rasmus Hansen, Maike Buschmann, Henrik Valerius, Oliver Braus, Gerhard H. Hoecker, Ute Feussner, Ivo Mutwil, Marek Ischebeck, Till de Vries, Sophie Lorenz, Maike de Vries, Jan |
description | Plant terrestrialization brought forth the land plants (embryophytes). Embryophytes account for most of the biomass on land and evolved from streptophyte algae in a singular event. Recent advances have unravelled the first full genomes of the closest algal relatives of land plants; among the first such species was
Mesotaenium endlicherianum
. Here we used fine-combed RNA sequencing in tandem with a photophysiological assessment on
Mesotaenium
exposed to a continuous range of temperature and light cues. Our data establish a grid of 42 different conditions, resulting in 128 transcriptomes and ~1.5 Tbp (~9.9 billion reads) of data to study the combinatory effects of stress response using clustering along gradients.
Mesotaenium
shares with land plants major hubs in genetic networks underpinning stress response and acclimation. Our data suggest that lipid droplet formation and plastid and cell wall-derived signals have denominated molecular programmes since more than 600 million years of streptophyte evolution—before plants made their first steps on land.
Dadras et al. exposed
Mesotaenium
, an alga of the sister lineage to land plants, to a bifactorial gradient of environmental cues and use comparative analyses to pinpoint conserved circuits in plant genetic response networks. |
doi_str_mv | 10.1038/s41477-023-01491-0 |
format | Article |
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Mesotaenium endlicherianum
. Here we used fine-combed RNA sequencing in tandem with a photophysiological assessment on
Mesotaenium
exposed to a continuous range of temperature and light cues. Our data establish a grid of 42 different conditions, resulting in 128 transcriptomes and ~1.5 Tbp (~9.9 billion reads) of data to study the combinatory effects of stress response using clustering along gradients.
Mesotaenium
shares with land plants major hubs in genetic networks underpinning stress response and acclimation. Our data suggest that lipid droplet formation and plastid and cell wall-derived signals have denominated molecular programmes since more than 600 million years of streptophyte evolution—before plants made their first steps on land.
Dadras et al. exposed
Mesotaenium
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Mesotaenium endlicherianum
. Here we used fine-combed RNA sequencing in tandem with a photophysiological assessment on
Mesotaenium
exposed to a continuous range of temperature and light cues. Our data establish a grid of 42 different conditions, resulting in 128 transcriptomes and ~1.5 Tbp (~9.9 billion reads) of data to study the combinatory effects of stress response using clustering along gradients.
Mesotaenium
shares with land plants major hubs in genetic networks underpinning stress response and acclimation. Our data suggest that lipid droplet formation and plastid and cell wall-derived signals have denominated molecular programmes since more than 600 million years of streptophyte evolution—before plants made their first steps on land.
Dadras et al. exposed
Mesotaenium
, an alga of the sister lineage to land plants, to a bifactorial gradient of environmental cues and use comparative analyses to pinpoint conserved circuits in plant genetic response networks.</description><subject>13</subject><subject>14</subject><subject>14/63</subject><subject>38</subject><subject>38/91</subject><subject>45</subject><subject>45/91</subject><subject>631/181</subject><subject>631/208/212/2019</subject><subject>631/449/2669</subject><subject>64</subject><subject>Acclimation</subject><subject>Acclimatization</subject><subject>Algae</subject><subject>Biomass</subject><subject>Biomedical and Life Sciences</subject><subject>Cell Wall</subject><subject>Cell walls</subject><subject>Chlorophyll</subject><subject>Clustering</subject><subject>Comparative analysis</subject><subject>Environmental gradient</subject><subject>Evolution</subject><subject>Gene Regulatory Networks</subject><subject>Gene sequencing</subject><subject>Genomes</subject><subject>Hubs</subject><subject>Life Sciences</subject><subject>Lipids</subject><subject>Mesotaenium</subject><subject>Plant Sciences</subject><subject>Transcriptomes</subject><issn>2055-0278</issn><issn>2055-0278</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><sourceid>C6C</sourceid><sourceid>EIF</sourceid><sourceid>AFKRA</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><recordid>eNp9UctOwzAQtBAIKuAHOKBIXLgE1rGd2CeEUHlIFVzgbDmJ0xqlTrGTSvD1bCmPwoGTVzvj8YyHkCMKZxSYPI-c8qJIIWMpUK5oCltklIEQuCrk9sa8Rw5jfAYAWgjBctgle6zIOSgmRuR-7JcudH5ufW_aZBpM7XCMSbBLi4vYBxtjMhvKmCyCTWvTOz9NFq3xfdLbgGgfnGndGwKdPyA7jWmjPfw898nT9fjx6jadPNzcXV1O0ooXok8pVVZYLgWtRam4rYUxEljFZSWNKUFIVasGGC1sYaRqhMrrUkHZ8FJVWUnZPrlY6y6Gcm7rCi0H0-pFcHMTXnVnnP6NeDfT026pKQj8l3ylcPqpELqXAVPouYuVbTGY7YaoM4kmpMwFIPXkD_W5G4LHfMjKRS4VozmysjWrCl2MwTbfbijoVWV6XZnGyvRHZXolfbyZ4_vKV0FIYGtCRMhPbfh5-x_ZdzZkozw</recordid><startdate>20230901</startdate><enddate>20230901</enddate><creator>Dadras, Armin</creator><creator>Fürst-Jansen, Janine M. 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R.</au><au>Darienko, Tatyana</au><au>Krone, Denis</au><au>Scholz, Patricia</au><au>Sun, Siqi</au><au>Herrfurth, Cornelia</au><au>Rieseberg, Tim P.</au><au>Irisarri, Iker</au><au>Steinkamp, Rasmus</au><au>Hansen, Maike</au><au>Buschmann, Henrik</au><au>Valerius, Oliver</au><au>Braus, Gerhard H.</au><au>Hoecker, Ute</au><au>Feussner, Ivo</au><au>Mutwil, Marek</au><au>Ischebeck, Till</au><au>de Vries, Sophie</au><au>Lorenz, Maike</au><au>de Vries, Jan</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Environmental gradients reveal stress hubs pre-dating plant terrestrialization</atitle><jtitle>Nature plants</jtitle><stitle>Nat. Plants</stitle><addtitle>Nat Plants</addtitle><date>2023-09-01</date><risdate>2023</risdate><volume>9</volume><issue>9</issue><spage>1419</spage><epage>1438</epage><pages>1419-1438</pages><issn>2055-0278</issn><eissn>2055-0278</eissn><abstract>Plant terrestrialization brought forth the land plants (embryophytes). Embryophytes account for most of the biomass on land and evolved from streptophyte algae in a singular event. Recent advances have unravelled the first full genomes of the closest algal relatives of land plants; among the first such species was
Mesotaenium endlicherianum
. Here we used fine-combed RNA sequencing in tandem with a photophysiological assessment on
Mesotaenium
exposed to a continuous range of temperature and light cues. Our data establish a grid of 42 different conditions, resulting in 128 transcriptomes and ~1.5 Tbp (~9.9 billion reads) of data to study the combinatory effects of stress response using clustering along gradients.
Mesotaenium
shares with land plants major hubs in genetic networks underpinning stress response and acclimation. Our data suggest that lipid droplet formation and plastid and cell wall-derived signals have denominated molecular programmes since more than 600 million years of streptophyte evolution—before plants made their first steps on land.
Dadras et al. exposed
Mesotaenium
, an alga of the sister lineage to land plants, to a bifactorial gradient of environmental cues and use comparative analyses to pinpoint conserved circuits in plant genetic response networks.</abstract><cop>London</cop><pub>Nature Publishing Group UK</pub><pmid>37640935</pmid><doi>10.1038/s41477-023-01491-0</doi><tpages>20</tpages><orcidid>https://orcid.org/0000-0002-3117-5626</orcidid><orcidid>https://orcid.org/0000-0003-3507-5195</orcidid><orcidid>https://orcid.org/0000-0002-5636-9777</orcidid><orcidid>https://orcid.org/0000-0002-7848-0126</orcidid><orcidid>https://orcid.org/0000-0002-0103-5606</orcidid><orcidid>https://orcid.org/0000-0002-5269-8725</orcidid><orcidid>https://orcid.org/0000-0003-1240-1189</orcidid><orcidid>https://orcid.org/0000-0002-5267-8935</orcidid><orcidid>https://orcid.org/0000-0002-9888-7003</orcidid><orcidid>https://orcid.org/0000-0001-8255-3255</orcidid><orcidid>https://orcid.org/0000-0003-3548-8475</orcidid><orcidid>https://orcid.org/0000-0002-2277-3077</orcidid><orcidid>https://orcid.org/0000-0001-7649-2388</orcidid><orcidid>https://orcid.org/0000-0003-0737-3822</orcidid><orcidid>https://orcid.org/0000-0003-0761-9175</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | 13 14 14/63 38 38/91 45 45/91 631/181 631/208/212/2019 631/449/2669 64 Acclimation Acclimatization Algae Biomass Biomedical and Life Sciences Cell Wall Cell walls Chlorophyll Clustering Comparative analysis Environmental gradient Evolution Gene Regulatory Networks Gene sequencing Genomes Hubs Life Sciences Lipids Mesotaenium Plant Sciences Transcriptomes |
title | Environmental gradients reveal stress hubs pre-dating plant terrestrialization |
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