Microbe‐induced drought tolerance by ABA‐mediated root architecture and epigenetic reprogramming

The use of beneficial microbes to mitigate drought stress tolerance of plants is of great potential albeit little understood. We show here that a root endophytic desert bacterium, Pseudomonas argentinensis strain SA190, enhances drought stress tolerance in Arabidopsis . Transcriptome and genetic ana...

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Veröffentlicht in:EMBO reports 2023-08, Vol.24 (8), p.e56754-n/a
Hauptverfasser: Alwutayd, Khairiah M, Rawat, Anamika A, Sheikh, Arsheed H, Almeida‐Trapp, Marilia, Veluchamy, Alaguraj, Jalal, Rewaa, Karampelias, Michael, Froehlich, Katja, Alzaed, Waad, Tabassum, Naheed, Schley, Thayssa Rabelo, Schäffner, Anton R, Daur, Ihsanullah, Saad, Maged M, Hirt, Heribert
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container_issue 8
container_start_page e56754
container_title EMBO reports
container_volume 24
creator Alwutayd, Khairiah M
Rawat, Anamika A
Sheikh, Arsheed H
Almeida‐Trapp, Marilia
Veluchamy, Alaguraj
Jalal, Rewaa
Karampelias, Michael
Froehlich, Katja
Alzaed, Waad
Tabassum, Naheed
Schley, Thayssa Rabelo
Schäffner, Anton R
Daur, Ihsanullah
Saad, Maged M
Hirt, Heribert
description The use of beneficial microbes to mitigate drought stress tolerance of plants is of great potential albeit little understood. We show here that a root endophytic desert bacterium, Pseudomonas argentinensis strain SA190, enhances drought stress tolerance in Arabidopsis . Transcriptome and genetic analysis demonstrate that SA190‐induced root morphogenesis and gene expression is mediated via the plant abscisic acid (ABA) pathway. Moreover, we demonstrate that SA190 primes the promoters of target genes in an epigenetic ABA‐dependent manner. Application of SA190 priming on crops is demonstrated for alfalfa, showing enhanced performance under drought conditions. In summary, a single beneficial root bacterial strain can help plants to resist drought conditions. Synopsis The beneficial root endophytic desert bacterium Pseudomonas argentinensis sp. SA190 enhances drought stress tolerance in Arabidopsis by priming target gene promoters in an epigenetic ABA‐dependent manner. SA190 modulates the expression of genes under drought stress in an ABA‐dependent manner. SA190 primes genes via H3K4me3 histone mark enrichment. SA190 alters host plant physiology by improving the plant water status. SA190 enhances crop performance under drought conditions. Graphical Abstract The beneficial root endophytic desert bacterium Pseudomonas argentinensis sp. SA190 enhances drought stress tolerance in Arabidopsis by priming target gene promoters in an epigenetic ABA‐dependent manner.
doi_str_mv 10.15252/embr.202256754
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We show here that a root endophytic desert bacterium, Pseudomonas argentinensis strain SA190, enhances drought stress tolerance in Arabidopsis . Transcriptome and genetic analysis demonstrate that SA190‐induced root morphogenesis and gene expression is mediated via the plant abscisic acid (ABA) pathway. Moreover, we demonstrate that SA190 primes the promoters of target genes in an epigenetic ABA‐dependent manner. Application of SA190 priming on crops is demonstrated for alfalfa, showing enhanced performance under drought conditions. In summary, a single beneficial root bacterial strain can help plants to resist drought conditions. Synopsis The beneficial root endophytic desert bacterium Pseudomonas argentinensis sp. SA190 enhances drought stress tolerance in Arabidopsis by priming target gene promoters in an epigenetic ABA‐dependent manner. SA190 modulates the expression of genes under drought stress in an ABA‐dependent manner. SA190 primes genes via H3K4me3 histone mark enrichment. SA190 alters host plant physiology by improving the plant water status. SA190 enhances crop performance under drought conditions. Graphical Abstract The beneficial root endophytic desert bacterium Pseudomonas argentinensis sp. 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We show here that a root endophytic desert bacterium, Pseudomonas argentinensis strain SA190, enhances drought stress tolerance in Arabidopsis . Transcriptome and genetic analysis demonstrate that SA190‐induced root morphogenesis and gene expression is mediated via the plant abscisic acid (ABA) pathway. Moreover, we demonstrate that SA190 primes the promoters of target genes in an epigenetic ABA‐dependent manner. Application of SA190 priming on crops is demonstrated for alfalfa, showing enhanced performance under drought conditions. In summary, a single beneficial root bacterial strain can help plants to resist drought conditions. Synopsis The beneficial root endophytic desert bacterium Pseudomonas argentinensis sp. SA190 enhances drought stress tolerance in Arabidopsis by priming target gene promoters in an epigenetic ABA‐dependent manner. SA190 modulates the expression of genes under drought stress in an ABA‐dependent manner. SA190 primes genes via H3K4me3 histone mark enrichment. SA190 alters host plant physiology by improving the plant water status. SA190 enhances crop performance under drought conditions. Graphical Abstract The beneficial root endophytic desert bacterium Pseudomonas argentinensis sp. 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Rawat, Anamika A ; Sheikh, Arsheed H ; Almeida‐Trapp, Marilia ; Veluchamy, Alaguraj ; Jalal, Rewaa ; Karampelias, Michael ; Froehlich, Katja ; Alzaed, Waad ; Tabassum, Naheed ; Schley, Thayssa Rabelo ; Schäffner, Anton R ; Daur, Ihsanullah ; Saad, Maged M ; Hirt, Heribert</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5144-6da6cfb551ad6c8375f1dade7be9bd595c92a4a50db0077038407cb858289c93</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>ABA</topic><topic>Abscisic acid</topic><topic>Abscisic Acid - metabolism</topic><topic>Abscisic Acid - pharmacology</topic><topic>Agricultural production</topic><topic>Alfalfa</topic><topic>Arabidopsis</topic><topic>Arabidopsis - genetics</topic><topic>Arabidopsis - metabolism</topic><topic>Arabidopsis Proteins - genetics</topic><topic>Arabidopsis Proteins - metabolism</topic><topic>Bacteria</topic><topic>Deserts</topic><topic>Drought</topic><topic>Drought Resistance</topic><topic>drought stress</topic><topic>EMBO09</topic><topic>EMBO23</topic><topic>EMBO30</topic><topic>Endophytes</topic><topic>Epigenesis, Genetic</topic><topic>Epigenetics</topic><topic>Gene expression</topic><topic>Gene Expression Regulation, Plant</topic><topic>Genes</topic><topic>Genetic analysis</topic><topic>H3K4me3</topic><topic>Histones</topic><topic>Host plants</topic><topic>Life Sciences</topic><topic>microbiome</topic><topic>Microorganisms</topic><topic>Morphogenesis</topic><topic>Performance enhancement</topic><topic>Plant bacterial diseases</topic><topic>Plant physiology</topic><topic>Plant Proteins - genetics</topic><topic>Plants (botany)</topic><topic>Plants, Genetically Modified - genetics</topic><topic>Priming</topic><topic>Promoters</topic><topic>Pseudomonas</topic><topic>Stress, Physiological - genetics</topic><topic>Transcriptomes</topic><topic>water use efficiency (WUE)</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Alwutayd, Khairiah M</creatorcontrib><creatorcontrib>Rawat, Anamika A</creatorcontrib><creatorcontrib>Sheikh, Arsheed H</creatorcontrib><creatorcontrib>Almeida‐Trapp, Marilia</creatorcontrib><creatorcontrib>Veluchamy, Alaguraj</creatorcontrib><creatorcontrib>Jalal, Rewaa</creatorcontrib><creatorcontrib>Karampelias, Michael</creatorcontrib><creatorcontrib>Froehlich, Katja</creatorcontrib><creatorcontrib>Alzaed, Waad</creatorcontrib><creatorcontrib>Tabassum, Naheed</creatorcontrib><creatorcontrib>Schley, Thayssa Rabelo</creatorcontrib><creatorcontrib>Schäffner, Anton R</creatorcontrib><creatorcontrib>Daur, Ihsanullah</creatorcontrib><creatorcontrib>Saad, Maged M</creatorcontrib><creatorcontrib>Hirt, Heribert</creatorcontrib><collection>Springer Nature OA/Free Journals</collection><collection>Wiley Online Library Open Access</collection><collection>Wiley Online Library (Open Access Collection)</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Immunology Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Oncogenes and Growth Factors Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>ProQuest Health &amp; 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We show here that a root endophytic desert bacterium, Pseudomonas argentinensis strain SA190, enhances drought stress tolerance in Arabidopsis . Transcriptome and genetic analysis demonstrate that SA190‐induced root morphogenesis and gene expression is mediated via the plant abscisic acid (ABA) pathway. Moreover, we demonstrate that SA190 primes the promoters of target genes in an epigenetic ABA‐dependent manner. Application of SA190 priming on crops is demonstrated for alfalfa, showing enhanced performance under drought conditions. In summary, a single beneficial root bacterial strain can help plants to resist drought conditions. Synopsis The beneficial root endophytic desert bacterium Pseudomonas argentinensis sp. SA190 enhances drought stress tolerance in Arabidopsis by priming target gene promoters in an epigenetic ABA‐dependent manner. SA190 modulates the expression of genes under drought stress in an ABA‐dependent manner. SA190 primes genes via H3K4me3 histone mark enrichment. SA190 alters host plant physiology by improving the plant water status. SA190 enhances crop performance under drought conditions. Graphical Abstract The beneficial root endophytic desert bacterium Pseudomonas argentinensis sp. 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subjects ABA
Abscisic acid
Abscisic Acid - metabolism
Abscisic Acid - pharmacology
Agricultural production
Alfalfa
Arabidopsis
Arabidopsis - genetics
Arabidopsis - metabolism
Arabidopsis Proteins - genetics
Arabidopsis Proteins - metabolism
Bacteria
Deserts
Drought
Drought Resistance
drought stress
EMBO09
EMBO23
EMBO30
Endophytes
Epigenesis, Genetic
Epigenetics
Gene expression
Gene Expression Regulation, Plant
Genes
Genetic analysis
H3K4me3
Histones
Host plants
Life Sciences
microbiome
Microorganisms
Morphogenesis
Performance enhancement
Plant bacterial diseases
Plant physiology
Plant Proteins - genetics
Plants (botany)
Plants, Genetically Modified - genetics
Priming
Promoters
Pseudomonas
Stress, Physiological - genetics
Transcriptomes
water use efficiency (WUE)
title Microbe‐induced drought tolerance by ABA‐mediated root architecture and epigenetic reprogramming
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