Gut microbiota of healthy Asians and their discriminative features revealed by metagenomics approach
This study is conducted to identify the microbial architecture and its functional capacity in the Asian population via the whole metagenomics approach. A brief comparison of the Asian countries namely Malaysia, India, China, and Thailand, was conducted, giving a total of 916 taxa under observation....
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description | This study is conducted to identify the microbial architecture and its functional capacity in the Asian population via the whole metagenomics approach. A brief comparison of the Asian countries namely Malaysia, India, China, and Thailand, was conducted, giving a total of 916 taxa under observation. Results show a close representation of the taxonomic diversity in the gut microbiota of Malaysia, India, and China, where Bacteroidetes, Firmicutes, and Actinobacteria were more predominant compared to other phyla. Mainly due to the multi-racial population in Malaysia, which also consists of Malays, Indian, and Chinese, the population tend to share similar dietary preferences, culture, and lifestyle, which are major influences that shapes the structure of the gut microbiota. Moreover, Thailand showed a more distinct diversity in the gut microbiota which was highly dominated by Firmicutes. Meanwhile, functional profiles show 1034 gene families that are common between the four countries. The Malaysia samples are having the most unique gene families with a total of 67,517 gene families, and 51 unique KEGG Orthologs, mainly dominated by the metabolic pathways, followed by microbial metabolism in diverse environments. In conclusion, this study provides some general overview on the structure of the Asian gut microbiota, with some additional highlights on the Malaysian population. |
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A brief comparison of the Asian countries namely Malaysia, India, China, and Thailand, was conducted, giving a total of 916 taxa under observation. Results show a close representation of the taxonomic diversity in the gut microbiota of Malaysia, India, and China, where Bacteroidetes, Firmicutes, and Actinobacteria were more predominant compared to other phyla. Mainly due to the multi-racial population in Malaysia, which also consists of Malays, Indian, and Chinese, the population tend to share similar dietary preferences, culture, and lifestyle, which are major influences that shapes the structure of the gut microbiota. Moreover, Thailand showed a more distinct diversity in the gut microbiota which was highly dominated by Firmicutes. Meanwhile, functional profiles show 1034 gene families that are common between the four countries. The Malaysia samples are having the most unique gene families with a total of 67,517 gene families, and 51 unique KEGG Orthologs, mainly dominated by the metabolic pathways, followed by microbial metabolism in diverse environments. In conclusion, this study provides some general overview on the structure of the Asian gut microbiota, with some additional highlights on the Malaysian population.</description><identifier>ISSN: 2190-572X</identifier><identifier>ISSN: 2190-5738</identifier><identifier>EISSN: 2190-5738</identifier><identifier>DOI: 10.1007/s13205-023-03671-3</identifier><identifier>PMID: 37457869</identifier><language>eng</language><publisher>Cham: Springer International Publishing</publisher><subject>Actinobacteria ; Agriculture ; Bacteroidetes ; Bioinformatics ; Biomaterials ; Biotechnology ; Cancer Research ; Chemistry ; Chemistry and Materials Science ; China ; Firmicutes ; Gene families ; genes ; India ; Intestinal microflora ; intestinal microorganisms ; lifestyle ; Malaysia ; Metabolic pathways ; metabolism ; Metagenomics ; Microbiota ; Microorganisms ; Original ; Original Article ; species diversity ; Stem Cells ; Thailand</subject><ispartof>3 Biotech, 2023-08, Vol.13 (8), p.275-275, Article 275</ispartof><rights>King Abdulaziz City for Science and Technology 2023. Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c508t-585679af43828d9dffa0def677924fbee2ed1755db094a2723e2a940beea3ba83</citedby><cites>FETCH-LOGICAL-c508t-585679af43828d9dffa0def677924fbee2ed1755db094a2723e2a940beea3ba83</cites><orcidid>0000-0001-8658-6900 ; 0000-0001-7978-0393 ; 0000-0002-6643-8078 ; 0000-0002-3280-1617 ; 0000-0003-2695-9132 ; 0000-0003-4515-6618</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC10338424/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC10338424/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,723,776,780,881,27901,27902,41464,42533,51294,53766,53768</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/37457869$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Taha, Siti Fatimah Mohd</creatorcontrib><creatorcontrib>Bhassu, Subha</creatorcontrib><creatorcontrib>Omar, Hasmahzaiti</creatorcontrib><creatorcontrib>Raju, Chandramati Samudi</creatorcontrib><creatorcontrib>Rajamanikam, Arutchelvan</creatorcontrib><creatorcontrib>Govind, Suresh Kumar P.</creatorcontrib><creatorcontrib>Mohamad, Saharuddin Bin</creatorcontrib><title>Gut microbiota of healthy Asians and their discriminative features revealed by metagenomics approach</title><title>3 Biotech</title><addtitle>3 Biotech</addtitle><addtitle>3 Biotech</addtitle><description>This study is conducted to identify the microbial architecture and its functional capacity in the Asian population via the whole metagenomics approach. A brief comparison of the Asian countries namely Malaysia, India, China, and Thailand, was conducted, giving a total of 916 taxa under observation. Results show a close representation of the taxonomic diversity in the gut microbiota of Malaysia, India, and China, where Bacteroidetes, Firmicutes, and Actinobacteria were more predominant compared to other phyla. Mainly due to the multi-racial population in Malaysia, which also consists of Malays, Indian, and Chinese, the population tend to share similar dietary preferences, culture, and lifestyle, which are major influences that shapes the structure of the gut microbiota. Moreover, Thailand showed a more distinct diversity in the gut microbiota which was highly dominated by Firmicutes. Meanwhile, functional profiles show 1034 gene families that are common between the four countries. The Malaysia samples are having the most unique gene families with a total of 67,517 gene families, and 51 unique KEGG Orthologs, mainly dominated by the metabolic pathways, followed by microbial metabolism in diverse environments. In conclusion, this study provides some general overview on the structure of the Asian gut microbiota, with some additional highlights on the Malaysian population.</description><subject>Actinobacteria</subject><subject>Agriculture</subject><subject>Bacteroidetes</subject><subject>Bioinformatics</subject><subject>Biomaterials</subject><subject>Biotechnology</subject><subject>Cancer Research</subject><subject>Chemistry</subject><subject>Chemistry and Materials Science</subject><subject>China</subject><subject>Firmicutes</subject><subject>Gene families</subject><subject>genes</subject><subject>India</subject><subject>Intestinal microflora</subject><subject>intestinal microorganisms</subject><subject>lifestyle</subject><subject>Malaysia</subject><subject>Metabolic pathways</subject><subject>metabolism</subject><subject>Metagenomics</subject><subject>Microbiota</subject><subject>Microorganisms</subject><subject>Original</subject><subject>Original Article</subject><subject>species diversity</subject><subject>Stem Cells</subject><subject>Thailand</subject><issn>2190-572X</issn><issn>2190-5738</issn><issn>2190-5738</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><recordid>eNqFkU1v1DAQhiNERavSP8ABWeLCJeDP2DmhqqIFqRIXKnGzJvFk4yqJF9tZaf89brcsHwfwxZbmed-Z8VtVrxh9xyjV7xMTnKqaclFT0WhWi2fVGWctrZUW5vnxzb-dVhcp3dNyFFMtoy-qU6Gl0qZpzyp3s2Yy-z6GzocMJAxkRJjyuCeXycOSCCyO5BF9JM6nPvrZL5D9DsmAkNeIiUTcFQk60u3JjBk2uIRiWaTbbQzQjy-rkwGmhBdP93l1d_3x69Wn-vbLzeery9u6V9TkWhnV6BYGKQw3rnXDANTh0Gjdcjl0iBwd00q5jrYSuOYCObSSlgqIDow4rz4cfLdrN6PrcckRJrstQ0Pc2wDe_llZ_Gg3YWcZFcJILovD2yeHGL6vmLKdy9I4TbBgWJMVTImmkYbT_6LcCNNIIaku6Ju_0PuwxqV8xQPVSNqU_QvFD1QJI6WIw3FwRu1D5vaQuS2Z28fMrSii17-vfJT8TLgA4gCkUlo2GH_1_oftD-OBuM4</recordid><startdate>20230801</startdate><enddate>20230801</enddate><creator>Taha, Siti Fatimah Mohd</creator><creator>Bhassu, Subha</creator><creator>Omar, Hasmahzaiti</creator><creator>Raju, Chandramati Samudi</creator><creator>Rajamanikam, Arutchelvan</creator><creator>Govind, Suresh Kumar P.</creator><creator>Mohamad, Saharuddin Bin</creator><general>Springer International Publishing</general><general>Springer Nature B.V</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7S9</scope><scope>L.6</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0001-8658-6900</orcidid><orcidid>https://orcid.org/0000-0001-7978-0393</orcidid><orcidid>https://orcid.org/0000-0002-6643-8078</orcidid><orcidid>https://orcid.org/0000-0002-3280-1617</orcidid><orcidid>https://orcid.org/0000-0003-2695-9132</orcidid><orcidid>https://orcid.org/0000-0003-4515-6618</orcidid></search><sort><creationdate>20230801</creationdate><title>Gut microbiota of healthy Asians and their discriminative features revealed by metagenomics approach</title><author>Taha, Siti Fatimah Mohd ; 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subjects | Actinobacteria Agriculture Bacteroidetes Bioinformatics Biomaterials Biotechnology Cancer Research Chemistry Chemistry and Materials Science China Firmicutes Gene families genes India Intestinal microflora intestinal microorganisms lifestyle Malaysia Metabolic pathways metabolism Metagenomics Microbiota Microorganisms Original Original Article species diversity Stem Cells Thailand |
title | Gut microbiota of healthy Asians and their discriminative features revealed by metagenomics approach |
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