1H-detected characterization of carbon–carbon networks in highly flexible protonated biomolecules using MAS NMR

In the last three decades, the scope of solid-state NMR has expanded to exploring complex biomolecules, from large protein assemblies to intact cells at atomic-level resolution. This diversity in macromolecules frequently features highly flexible components whose insoluble environment precludes the...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Journal of biomolecular NMR 2023-06, Vol.77 (3), p.111-119
Hauptverfasser: Bahri, Salima, Safeer, Adil, Adler, Agnes, Smedes, Hanneke, van Ingen, Hugo, Baldus, Marc
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 119
container_issue 3
container_start_page 111
container_title Journal of biomolecular NMR
container_volume 77
creator Bahri, Salima
Safeer, Adil
Adler, Agnes
Smedes, Hanneke
van Ingen, Hugo
Baldus, Marc
description In the last three decades, the scope of solid-state NMR has expanded to exploring complex biomolecules, from large protein assemblies to intact cells at atomic-level resolution. This diversity in macromolecules frequently features highly flexible components whose insoluble environment precludes the use of solution NMR to study their structure and interactions. While High-resolution Magic-Angle Spinning (HR-MAS) probes offer the capacity for gradient-based 1 H-detected spectroscopy in solids, such probes are not commonly used for routine MAS NMR experiments. As a result, most exploration of the flexible regime entails either 13 C-detected experiments, the use of partially perdeuterated systems, or ultra-fast MAS. Here we explore proton-detected pulse schemes probing through-bond 13 C– 13 C networks to study mobile protein sidechains as well as polysaccharides in a broadband manner. We demonstrate the use of such schemes to study a mixture of microtubule-associated protein (MAP) tau and human microtubules (MTs), and the cell wall of the fungus Schizophyllum commune using 2D and 3D spectroscopy, to show its viability for obtaining unambiguous correlations using standard fast-spinning MAS probes at high and ultra-high magnetic fields.
doi_str_mv 10.1007/s10858-023-00415-6
format Article
fullrecord <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_10307723</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2830492771</sourcerecordid><originalsourceid>FETCH-LOGICAL-c382t-d91c599f88a50a11384aca00320608e0a8cd79f7d93862a9d655c6a8c07d8a6b3</originalsourceid><addsrcrecordid>eNp9kc1uFSEYhonR2GP1BlyRuHGDfsBhgJVpGrVNWk38WROGYc6hcuAUZtS68h56h16J1Gk0unDFF3jeJx95EXpM4RkFkM8rBSUUAcYJwJoK0t1BKyokJwKA3kUr0EwQJrk6QA9qvQAArVh3Hx1wyZTmIFbokp6QwU_eTX7AbmuLbVMJ3-wUcsJ5xM6WPqcf36-XASc_fcnlU8Uh4W3YbOMVHqP_Gvro8b7kKSd7o-pD3uXo3Rx9xXMNaYPPj97jN-fvHqJ7o43VP7o9D9HHVy8_HJ-Qs7evT4-Pzojjik1k0NQJrUelrABLKVdr6ywAZ9CB8mCVG6Qe5aC56pjVQyeE69otyEHZrueH6MXi3c_9zg_Op6nYaPYl7Gy5MtkG8_dLCluzyZ8NBQ5SMt4MT28NJV_Ovk5mF6rzMdrk81wNU4xrpRlXDX3yD3qR55La_xrFYa2ZlLRRbKFcybUWP_7ehoK5qdQslZpWqflVqelaiC-h2uC08eWP-j-pn6FdpM0</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2830492771</pqid></control><display><type>article</type><title>1H-detected characterization of carbon–carbon networks in highly flexible protonated biomolecules using MAS NMR</title><source>SpringerLink Journals - AutoHoldings</source><creator>Bahri, Salima ; Safeer, Adil ; Adler, Agnes ; Smedes, Hanneke ; van Ingen, Hugo ; Baldus, Marc</creator><creatorcontrib>Bahri, Salima ; Safeer, Adil ; Adler, Agnes ; Smedes, Hanneke ; van Ingen, Hugo ; Baldus, Marc</creatorcontrib><description>In the last three decades, the scope of solid-state NMR has expanded to exploring complex biomolecules, from large protein assemblies to intact cells at atomic-level resolution. This diversity in macromolecules frequently features highly flexible components whose insoluble environment precludes the use of solution NMR to study their structure and interactions. While High-resolution Magic-Angle Spinning (HR-MAS) probes offer the capacity for gradient-based 1 H-detected spectroscopy in solids, such probes are not commonly used for routine MAS NMR experiments. As a result, most exploration of the flexible regime entails either 13 C-detected experiments, the use of partially perdeuterated systems, or ultra-fast MAS. Here we explore proton-detected pulse schemes probing through-bond 13 C– 13 C networks to study mobile protein sidechains as well as polysaccharides in a broadband manner. We demonstrate the use of such schemes to study a mixture of microtubule-associated protein (MAP) tau and human microtubules (MTs), and the cell wall of the fungus Schizophyllum commune using 2D and 3D spectroscopy, to show its viability for obtaining unambiguous correlations using standard fast-spinning MAS probes at high and ultra-high magnetic fields.</description><identifier>ISSN: 0925-2738</identifier><identifier>EISSN: 1573-5001</identifier><identifier>DOI: 10.1007/s10858-023-00415-6</identifier><identifier>PMID: 37289305</identifier><language>eng</language><publisher>Dordrecht: Springer Netherlands</publisher><subject>Biochemistry ; Biological and Medical Physics ; Biomolecules ; Biophysics ; Broadband ; Carbon ; Carbon 13 ; Cell walls ; Flexible components ; Macromolecules ; Magnetic fields ; Microtubule-associated proteins ; NMR ; NMR spectroscopy ; Nuclear magnetic resonance ; Physics ; Physics and Astronomy ; Polysaccharides ; Probes ; Proteins ; Saccharides ; Spectroscopy ; Spectroscopy/Spectrometry ; Spectrum analysis</subject><ispartof>Journal of biomolecular NMR, 2023-06, Vol.77 (3), p.111-119</ispartof><rights>The Author(s) 2023</rights><rights>The Author(s) 2023. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c382t-d91c599f88a50a11384aca00320608e0a8cd79f7d93862a9d655c6a8c07d8a6b3</citedby><cites>FETCH-LOGICAL-c382t-d91c599f88a50a11384aca00320608e0a8cd79f7d93862a9d655c6a8c07d8a6b3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s10858-023-00415-6$$EPDF$$P50$$Gspringer$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s10858-023-00415-6$$EHTML$$P50$$Gspringer$$Hfree_for_read</linktohtml><link.rule.ids>230,314,780,784,885,27924,27925,41488,42557,51319</link.rule.ids></links><search><creatorcontrib>Bahri, Salima</creatorcontrib><creatorcontrib>Safeer, Adil</creatorcontrib><creatorcontrib>Adler, Agnes</creatorcontrib><creatorcontrib>Smedes, Hanneke</creatorcontrib><creatorcontrib>van Ingen, Hugo</creatorcontrib><creatorcontrib>Baldus, Marc</creatorcontrib><title>1H-detected characterization of carbon–carbon networks in highly flexible protonated biomolecules using MAS NMR</title><title>Journal of biomolecular NMR</title><addtitle>J Biomol NMR</addtitle><description>In the last three decades, the scope of solid-state NMR has expanded to exploring complex biomolecules, from large protein assemblies to intact cells at atomic-level resolution. This diversity in macromolecules frequently features highly flexible components whose insoluble environment precludes the use of solution NMR to study their structure and interactions. While High-resolution Magic-Angle Spinning (HR-MAS) probes offer the capacity for gradient-based 1 H-detected spectroscopy in solids, such probes are not commonly used for routine MAS NMR experiments. As a result, most exploration of the flexible regime entails either 13 C-detected experiments, the use of partially perdeuterated systems, or ultra-fast MAS. Here we explore proton-detected pulse schemes probing through-bond 13 C– 13 C networks to study mobile protein sidechains as well as polysaccharides in a broadband manner. We demonstrate the use of such schemes to study a mixture of microtubule-associated protein (MAP) tau and human microtubules (MTs), and the cell wall of the fungus Schizophyllum commune using 2D and 3D spectroscopy, to show its viability for obtaining unambiguous correlations using standard fast-spinning MAS probes at high and ultra-high magnetic fields.</description><subject>Biochemistry</subject><subject>Biological and Medical Physics</subject><subject>Biomolecules</subject><subject>Biophysics</subject><subject>Broadband</subject><subject>Carbon</subject><subject>Carbon 13</subject><subject>Cell walls</subject><subject>Flexible components</subject><subject>Macromolecules</subject><subject>Magnetic fields</subject><subject>Microtubule-associated proteins</subject><subject>NMR</subject><subject>NMR spectroscopy</subject><subject>Nuclear magnetic resonance</subject><subject>Physics</subject><subject>Physics and Astronomy</subject><subject>Polysaccharides</subject><subject>Probes</subject><subject>Proteins</subject><subject>Saccharides</subject><subject>Spectroscopy</subject><subject>Spectroscopy/Spectrometry</subject><subject>Spectrum analysis</subject><issn>0925-2738</issn><issn>1573-5001</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><sourceid>C6C</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp9kc1uFSEYhonR2GP1BlyRuHGDfsBhgJVpGrVNWk38WROGYc6hcuAUZtS68h56h16J1Gk0unDFF3jeJx95EXpM4RkFkM8rBSUUAcYJwJoK0t1BKyokJwKA3kUr0EwQJrk6QA9qvQAArVh3Hx1wyZTmIFbokp6QwU_eTX7AbmuLbVMJ3-wUcsJ5xM6WPqcf36-XASc_fcnlU8Uh4W3YbOMVHqP_Gvro8b7kKSd7o-pD3uXo3Rx9xXMNaYPPj97jN-fvHqJ7o43VP7o9D9HHVy8_HJ-Qs7evT4-Pzojjik1k0NQJrUelrABLKVdr6ywAZ9CB8mCVG6Qe5aC56pjVQyeE69otyEHZrueH6MXi3c_9zg_Op6nYaPYl7Gy5MtkG8_dLCluzyZ8NBQ5SMt4MT28NJV_Ovk5mF6rzMdrk81wNU4xrpRlXDX3yD3qR55La_xrFYa2ZlLRRbKFcybUWP_7ehoK5qdQslZpWqflVqelaiC-h2uC08eWP-j-pn6FdpM0</recordid><startdate>20230601</startdate><enddate>20230601</enddate><creator>Bahri, Salima</creator><creator>Safeer, Adil</creator><creator>Adler, Agnes</creator><creator>Smedes, Hanneke</creator><creator>van Ingen, Hugo</creator><creator>Baldus, Marc</creator><general>Springer Netherlands</general><general>Springer Nature B.V</general><scope>C6C</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7QO</scope><scope>7TK</scope><scope>7TM</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20230601</creationdate><title>1H-detected characterization of carbon–carbon networks in highly flexible protonated biomolecules using MAS NMR</title><author>Bahri, Salima ; Safeer, Adil ; Adler, Agnes ; Smedes, Hanneke ; van Ingen, Hugo ; Baldus, Marc</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c382t-d91c599f88a50a11384aca00320608e0a8cd79f7d93862a9d655c6a8c07d8a6b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Biochemistry</topic><topic>Biological and Medical Physics</topic><topic>Biomolecules</topic><topic>Biophysics</topic><topic>Broadband</topic><topic>Carbon</topic><topic>Carbon 13</topic><topic>Cell walls</topic><topic>Flexible components</topic><topic>Macromolecules</topic><topic>Magnetic fields</topic><topic>Microtubule-associated proteins</topic><topic>NMR</topic><topic>NMR spectroscopy</topic><topic>Nuclear magnetic resonance</topic><topic>Physics</topic><topic>Physics and Astronomy</topic><topic>Polysaccharides</topic><topic>Probes</topic><topic>Proteins</topic><topic>Saccharides</topic><topic>Spectroscopy</topic><topic>Spectroscopy/Spectrometry</topic><topic>Spectrum analysis</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Bahri, Salima</creatorcontrib><creatorcontrib>Safeer, Adil</creatorcontrib><creatorcontrib>Adler, Agnes</creatorcontrib><creatorcontrib>Smedes, Hanneke</creatorcontrib><creatorcontrib>van Ingen, Hugo</creatorcontrib><creatorcontrib>Baldus, Marc</creatorcontrib><collection>Springer Nature OA Free Journals</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Biotechnology Research Abstracts</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Health &amp; Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Technology Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>Advanced Technologies &amp; Aerospace Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Technology Collection</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health &amp; Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health &amp; Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Biological Science Database</collection><collection>Advanced Technologies &amp; Aerospace Database</collection><collection>ProQuest Advanced Technologies &amp; Aerospace Collection</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Journal of biomolecular NMR</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Bahri, Salima</au><au>Safeer, Adil</au><au>Adler, Agnes</au><au>Smedes, Hanneke</au><au>van Ingen, Hugo</au><au>Baldus, Marc</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>1H-detected characterization of carbon–carbon networks in highly flexible protonated biomolecules using MAS NMR</atitle><jtitle>Journal of biomolecular NMR</jtitle><stitle>J Biomol NMR</stitle><date>2023-06-01</date><risdate>2023</risdate><volume>77</volume><issue>3</issue><spage>111</spage><epage>119</epage><pages>111-119</pages><issn>0925-2738</issn><eissn>1573-5001</eissn><abstract>In the last three decades, the scope of solid-state NMR has expanded to exploring complex biomolecules, from large protein assemblies to intact cells at atomic-level resolution. This diversity in macromolecules frequently features highly flexible components whose insoluble environment precludes the use of solution NMR to study their structure and interactions. While High-resolution Magic-Angle Spinning (HR-MAS) probes offer the capacity for gradient-based 1 H-detected spectroscopy in solids, such probes are not commonly used for routine MAS NMR experiments. As a result, most exploration of the flexible regime entails either 13 C-detected experiments, the use of partially perdeuterated systems, or ultra-fast MAS. Here we explore proton-detected pulse schemes probing through-bond 13 C– 13 C networks to study mobile protein sidechains as well as polysaccharides in a broadband manner. We demonstrate the use of such schemes to study a mixture of microtubule-associated protein (MAP) tau and human microtubules (MTs), and the cell wall of the fungus Schizophyllum commune using 2D and 3D spectroscopy, to show its viability for obtaining unambiguous correlations using standard fast-spinning MAS probes at high and ultra-high magnetic fields.</abstract><cop>Dordrecht</cop><pub>Springer Netherlands</pub><pmid>37289305</pmid><doi>10.1007/s10858-023-00415-6</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 0925-2738
ispartof Journal of biomolecular NMR, 2023-06, Vol.77 (3), p.111-119
issn 0925-2738
1573-5001
language eng
recordid cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_10307723
source SpringerLink Journals - AutoHoldings
subjects Biochemistry
Biological and Medical Physics
Biomolecules
Biophysics
Broadband
Carbon
Carbon 13
Cell walls
Flexible components
Macromolecules
Magnetic fields
Microtubule-associated proteins
NMR
NMR spectroscopy
Nuclear magnetic resonance
Physics
Physics and Astronomy
Polysaccharides
Probes
Proteins
Saccharides
Spectroscopy
Spectroscopy/Spectrometry
Spectrum analysis
title 1H-detected characterization of carbon–carbon networks in highly flexible protonated biomolecules using MAS NMR
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-28T16%3A50%3A41IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=1H-detected%20characterization%20of%20carbon%E2%80%93carbon%20networks%20in%20highly%20flexible%20protonated%20biomolecules%20using%20MAS%20NMR&rft.jtitle=Journal%20of%20biomolecular%20NMR&rft.au=Bahri,%20Salima&rft.date=2023-06-01&rft.volume=77&rft.issue=3&rft.spage=111&rft.epage=119&rft.pages=111-119&rft.issn=0925-2738&rft.eissn=1573-5001&rft_id=info:doi/10.1007/s10858-023-00415-6&rft_dat=%3Cproquest_pubme%3E2830492771%3C/proquest_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2830492771&rft_id=info:pmid/37289305&rfr_iscdi=true