Innovative Approach to Isolate and Characterize Glioblastoma Circulating Tumor Cells and Correlation with Tumor Mutational Status
Circulating tumor cells (CTCs) are one of the most important causes of tumor recurrence and distant metastases. Glioblastoma (GBM) has been considered restricted to the brain for many years. Nevertheless, in the past years, several pieces of evidence indicate that hematogenous dissemination is a rea...
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Veröffentlicht in: | International journal of molecular sciences 2023-06, Vol.24 (12), p.10147 |
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creator | Lessi, Francesca Morelli, Mariangela Franceschi, Sara Aretini, Paolo Menicagli, Michele Marranci, Andrea Pasqualetti, Francesco Gambacciani, Carlo Pieri, Francesco Grimod, Gianluca Zucchi, Vanna Cupini, Samanta Di Stefano, Anna Luisa Santonocito, Orazio Santo Mazzanti, Chiara Maria |
description | Circulating tumor cells (CTCs) are one of the most important causes of tumor recurrence and distant metastases. Glioblastoma (GBM) has been considered restricted to the brain for many years. Nevertheless, in the past years, several pieces of evidence indicate that hematogenous dissemination is a reality, and this is also in the caseof GBM. Our aim was to optimize CTCs' detection in GBM and define the genetic background of single CTCs compared to the primary GBM tumor and its recurrence to demonstrate that CTCs are indeed derived from the parental tumor. We collected blood samples from a recurrent IDH wt GBM patient. We genotyped the parental recurrent tumor tissue and the respective primary GBM tissue. CTCs were analyzed using the DEPArray system. CTCs Copy Number Alterations (CNAs) and sequencing analyses were performed to compare CTCs' genetic background with the same patient's primary and recurrent GBM tissues. We identified 210 common mutations in the primary and recurrent tumors. Among these, three somatic high-frequency mutations (in
,
, and
genes) were selected to investigate their presence in CTCs. Almost all sorted CTCs (9/13) had at least one of the mutations tested. The presence of
promoter mutations was also investigated and C228T variation was found in parental tumors and CTCs (C228T heterozygous and homozygous, respectively). We were able to isolate and genotype CTCs from a patient with GBM. We found common mutations but also exclusive molecular characteristics. |
doi_str_mv | 10.3390/ijms241210147 |
format | Article |
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,
, and
genes) were selected to investigate their presence in CTCs. Almost all sorted CTCs (9/13) had at least one of the mutations tested. The presence of
promoter mutations was also investigated and C228T variation was found in parental tumors and CTCs (C228T heterozygous and homozygous, respectively). We were able to isolate and genotype CTCs from a patient with GBM. We found common mutations but also exclusive molecular characteristics.</description><identifier>ISSN: 1422-0067</identifier><identifier>ISSN: 1661-6596</identifier><identifier>EISSN: 1422-0067</identifier><identifier>DOI: 10.3390/ijms241210147</identifier><identifier>PMID: 37373295</identifier><language>eng</language><publisher>Switzerland: MDPI AG</publisher><subject>Brain cancer ; Brain tumors ; Chromosomes ; Comparative analysis ; Copy number ; Genetic aspects ; Genotypes ; Glioblastoma ; Glioblastoma multiforme ; Medical prognosis ; Metastases ; Metastasis ; Mutation ; Patients ; Scientific equipment and supplies industry ; Sequences ; Tbx1 protein ; Tumor cells ; Tumors</subject><ispartof>International journal of molecular sciences, 2023-06, Vol.24 (12), p.10147</ispartof><rights>COPYRIGHT 2023 MDPI AG</rights><rights>2023 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2023 by the authors. 2023</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c483t-49cc47d6ccb4ab0e42140c217ecc5d3c8ec1b87a34d41eae8b01789f5f4929563</citedby><cites>FETCH-LOGICAL-c483t-49cc47d6ccb4ab0e42140c217ecc5d3c8ec1b87a34d41eae8b01789f5f4929563</cites><orcidid>0000-0002-0788-1205 ; 0000-0002-3346-4296 ; 0000-0002-7249-9221 ; 0000-0002-4246-4407 ; 0000-0003-1075-4319 ; 0000-0002-8334-8795</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC10299553/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC10299553/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,27915,27916,53782,53784</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/37373295$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Lessi, Francesca</creatorcontrib><creatorcontrib>Morelli, Mariangela</creatorcontrib><creatorcontrib>Franceschi, Sara</creatorcontrib><creatorcontrib>Aretini, Paolo</creatorcontrib><creatorcontrib>Menicagli, Michele</creatorcontrib><creatorcontrib>Marranci, Andrea</creatorcontrib><creatorcontrib>Pasqualetti, Francesco</creatorcontrib><creatorcontrib>Gambacciani, Carlo</creatorcontrib><creatorcontrib>Pieri, Francesco</creatorcontrib><creatorcontrib>Grimod, Gianluca</creatorcontrib><creatorcontrib>Zucchi, Vanna</creatorcontrib><creatorcontrib>Cupini, Samanta</creatorcontrib><creatorcontrib>Di Stefano, Anna Luisa</creatorcontrib><creatorcontrib>Santonocito, Orazio Santo</creatorcontrib><creatorcontrib>Mazzanti, Chiara Maria</creatorcontrib><title>Innovative Approach to Isolate and Characterize Glioblastoma Circulating Tumor Cells and Correlation with Tumor Mutational Status</title><title>International journal of molecular sciences</title><addtitle>Int J Mol Sci</addtitle><description>Circulating tumor cells (CTCs) are one of the most important causes of tumor recurrence and distant metastases. Glioblastoma (GBM) has been considered restricted to the brain for many years. Nevertheless, in the past years, several pieces of evidence indicate that hematogenous dissemination is a reality, and this is also in the caseof GBM. Our aim was to optimize CTCs' detection in GBM and define the genetic background of single CTCs compared to the primary GBM tumor and its recurrence to demonstrate that CTCs are indeed derived from the parental tumor. We collected blood samples from a recurrent IDH wt GBM patient. We genotyped the parental recurrent tumor tissue and the respective primary GBM tissue. CTCs were analyzed using the DEPArray system. CTCs Copy Number Alterations (CNAs) and sequencing analyses were performed to compare CTCs' genetic background with the same patient's primary and recurrent GBM tissues. We identified 210 common mutations in the primary and recurrent tumors. Among these, three somatic high-frequency mutations (in
,
, and
genes) were selected to investigate their presence in CTCs. Almost all sorted CTCs (9/13) had at least one of the mutations tested. The presence of
promoter mutations was also investigated and C228T variation was found in parental tumors and CTCs (C228T heterozygous and homozygous, respectively). We were able to isolate and genotype CTCs from a patient with GBM. We found common mutations but also exclusive molecular characteristics.</description><subject>Brain cancer</subject><subject>Brain tumors</subject><subject>Chromosomes</subject><subject>Comparative analysis</subject><subject>Copy number</subject><subject>Genetic aspects</subject><subject>Genotypes</subject><subject>Glioblastoma</subject><subject>Glioblastoma multiforme</subject><subject>Medical prognosis</subject><subject>Metastases</subject><subject>Metastasis</subject><subject>Mutation</subject><subject>Patients</subject><subject>Scientific equipment and supplies industry</subject><subject>Sequences</subject><subject>Tbx1 protein</subject><subject>Tumor cells</subject><subject>Tumors</subject><issn>1422-0067</issn><issn>1661-6596</issn><issn>1422-0067</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><sourceid>8G5</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><recordid>eNptkk1v1DAQhiMEoqVw5IosceGS4q_EyQmtIlpWKuJAOVuOM9n1yrEX29kKbv3neNmldBGag0czz7yj15qieE3wJWMtfm82U6ScUIIJF0-Kc8IpLTGuxdNH-VnxIsYNxpTRqn1enDGRg7bVeXG_dM7vVDI7QIvtNnil1yh5tIzeqgRIuQF1axWUThDMT0DX1vjeqpj8pFBngp4zZ9wK3c6TD6gDa-NhyocA-5536M6k9RH4PKffNWXR15zN8WXxbFQ2wqvje1F8u_p4230qb75cL7vFTal5w1LJW625GGqte656DJwSjjUlArSuBqYb0KRvhGJ84AQUND0momnHauRtdlqzi-LDQXc79xMMGlwKysptMJMKP6RXRp52nFnLld9JgmnbVhXLCu-OCsF_nyEmOZmos2HlwM9R0obhuq4xFRl9-w-68XPIpvcUbRtGWM3-UitlQRo3-rxY70XlQlQZqgWvMnX5HyrHAJPR3sFocv1koDwM6OBjDDA-mCRY7o9GnhxN5t88_pkH-s-VsF9QTb7r</recordid><startdate>20230614</startdate><enddate>20230614</enddate><creator>Lessi, Francesca</creator><creator>Morelli, Mariangela</creator><creator>Franceschi, Sara</creator><creator>Aretini, Paolo</creator><creator>Menicagli, Michele</creator><creator>Marranci, Andrea</creator><creator>Pasqualetti, Francesco</creator><creator>Gambacciani, Carlo</creator><creator>Pieri, Francesco</creator><creator>Grimod, Gianluca</creator><creator>Zucchi, Vanna</creator><creator>Cupini, Samanta</creator><creator>Di Stefano, Anna Luisa</creator><creator>Santonocito, Orazio Santo</creator><creator>Mazzanti, Chiara Maria</creator><general>MDPI AG</general><general>MDPI</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>K9.</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>MBDVC</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0002-0788-1205</orcidid><orcidid>https://orcid.org/0000-0002-3346-4296</orcidid><orcidid>https://orcid.org/0000-0002-7249-9221</orcidid><orcidid>https://orcid.org/0000-0002-4246-4407</orcidid><orcidid>https://orcid.org/0000-0003-1075-4319</orcidid><orcidid>https://orcid.org/0000-0002-8334-8795</orcidid></search><sort><creationdate>20230614</creationdate><title>Innovative Approach to Isolate and Characterize Glioblastoma Circulating Tumor Cells and Correlation with Tumor Mutational Status</title><author>Lessi, Francesca ; Morelli, Mariangela ; Franceschi, Sara ; Aretini, Paolo ; Menicagli, Michele ; Marranci, Andrea ; Pasqualetti, Francesco ; Gambacciani, Carlo ; Pieri, Francesco ; Grimod, Gianluca ; Zucchi, Vanna ; Cupini, Samanta ; Di Stefano, Anna Luisa ; Santonocito, Orazio Santo ; Mazzanti, Chiara Maria</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c483t-49cc47d6ccb4ab0e42140c217ecc5d3c8ec1b87a34d41eae8b01789f5f4929563</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Brain cancer</topic><topic>Brain tumors</topic><topic>Chromosomes</topic><topic>Comparative analysis</topic><topic>Copy number</topic><topic>Genetic aspects</topic><topic>Genotypes</topic><topic>Glioblastoma</topic><topic>Glioblastoma multiforme</topic><topic>Medical prognosis</topic><topic>Metastases</topic><topic>Metastasis</topic><topic>Mutation</topic><topic>Patients</topic><topic>Scientific equipment and supplies industry</topic><topic>Sequences</topic><topic>Tbx1 protein</topic><topic>Tumor cells</topic><topic>Tumors</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lessi, Francesca</creatorcontrib><creatorcontrib>Morelli, Mariangela</creatorcontrib><creatorcontrib>Franceschi, Sara</creatorcontrib><creatorcontrib>Aretini, Paolo</creatorcontrib><creatorcontrib>Menicagli, Michele</creatorcontrib><creatorcontrib>Marranci, Andrea</creatorcontrib><creatorcontrib>Pasqualetti, Francesco</creatorcontrib><creatorcontrib>Gambacciani, Carlo</creatorcontrib><creatorcontrib>Pieri, Francesco</creatorcontrib><creatorcontrib>Grimod, Gianluca</creatorcontrib><creatorcontrib>Zucchi, Vanna</creatorcontrib><creatorcontrib>Cupini, Samanta</creatorcontrib><creatorcontrib>Di Stefano, Anna Luisa</creatorcontrib><creatorcontrib>Santonocito, Orazio Santo</creatorcontrib><creatorcontrib>Mazzanti, Chiara Maria</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Research Library</collection><collection>Research Library (Corporate)</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>International journal of molecular sciences</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lessi, Francesca</au><au>Morelli, Mariangela</au><au>Franceschi, Sara</au><au>Aretini, Paolo</au><au>Menicagli, Michele</au><au>Marranci, Andrea</au><au>Pasqualetti, Francesco</au><au>Gambacciani, Carlo</au><au>Pieri, Francesco</au><au>Grimod, Gianluca</au><au>Zucchi, Vanna</au><au>Cupini, Samanta</au><au>Di Stefano, Anna Luisa</au><au>Santonocito, Orazio Santo</au><au>Mazzanti, Chiara Maria</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Innovative Approach to Isolate and Characterize Glioblastoma Circulating Tumor Cells and Correlation with Tumor Mutational Status</atitle><jtitle>International journal of molecular sciences</jtitle><addtitle>Int J Mol Sci</addtitle><date>2023-06-14</date><risdate>2023</risdate><volume>24</volume><issue>12</issue><spage>10147</spage><pages>10147-</pages><issn>1422-0067</issn><issn>1661-6596</issn><eissn>1422-0067</eissn><abstract>Circulating tumor cells (CTCs) are one of the most important causes of tumor recurrence and distant metastases. Glioblastoma (GBM) has been considered restricted to the brain for many years. Nevertheless, in the past years, several pieces of evidence indicate that hematogenous dissemination is a reality, and this is also in the caseof GBM. Our aim was to optimize CTCs' detection in GBM and define the genetic background of single CTCs compared to the primary GBM tumor and its recurrence to demonstrate that CTCs are indeed derived from the parental tumor. We collected blood samples from a recurrent IDH wt GBM patient. We genotyped the parental recurrent tumor tissue and the respective primary GBM tissue. CTCs were analyzed using the DEPArray system. CTCs Copy Number Alterations (CNAs) and sequencing analyses were performed to compare CTCs' genetic background with the same patient's primary and recurrent GBM tissues. We identified 210 common mutations in the primary and recurrent tumors. Among these, three somatic high-frequency mutations (in
,
, and
genes) were selected to investigate their presence in CTCs. Almost all sorted CTCs (9/13) had at least one of the mutations tested. The presence of
promoter mutations was also investigated and C228T variation was found in parental tumors and CTCs (C228T heterozygous and homozygous, respectively). We were able to isolate and genotype CTCs from a patient with GBM. We found common mutations but also exclusive molecular characteristics.</abstract><cop>Switzerland</cop><pub>MDPI AG</pub><pmid>37373295</pmid><doi>10.3390/ijms241210147</doi><orcidid>https://orcid.org/0000-0002-0788-1205</orcidid><orcidid>https://orcid.org/0000-0002-3346-4296</orcidid><orcidid>https://orcid.org/0000-0002-7249-9221</orcidid><orcidid>https://orcid.org/0000-0002-4246-4407</orcidid><orcidid>https://orcid.org/0000-0003-1075-4319</orcidid><orcidid>https://orcid.org/0000-0002-8334-8795</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Brain cancer Brain tumors Chromosomes Comparative analysis Copy number Genetic aspects Genotypes Glioblastoma Glioblastoma multiforme Medical prognosis Metastases Metastasis Mutation Patients Scientific equipment and supplies industry Sequences Tbx1 protein Tumor cells Tumors |
title | Innovative Approach to Isolate and Characterize Glioblastoma Circulating Tumor Cells and Correlation with Tumor Mutational Status |
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