Structures of Get3d reveal a distinct architecture associated with the emergence of photosynthesis
Homologs of the protein Get3 have been identified in all domains yet remain to be fully characterized. In the eukaryotic cytoplasm, Get3 delivers tail-anchored (TA) integral membrane proteins, defined by a single transmembrane helix at their C terminus, to the endoplasmic reticulum. While most eukar...
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Veröffentlicht in: | The Journal of biological chemistry 2023-06, Vol.299 (6), p.104752, Article 104752 |
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creator | Barlow, Alexandra N. Manu, M.S. Saladi, Shyam M. Tarr, Paul T. Yadav, Yashpal Thinn, Aye M.M. Zhu, Yun Laganowsky, Arthur D. Clemons, William M. Ramasamy, Sureshkumar |
description | Homologs of the protein Get3 have been identified in all domains yet remain to be fully characterized. In the eukaryotic cytoplasm, Get3 delivers tail-anchored (TA) integral membrane proteins, defined by a single transmembrane helix at their C terminus, to the endoplasmic reticulum. While most eukaryotes have a single Get3 gene, plants are notable for having multiple Get3 paralogs. Get3d is conserved across land plants and photosynthetic bacteria and includes a distinctive C-terminal α-crystallin domain. After tracing the evolutionary origin of Get3d, we solve the Arabidopsis thaliana Get3d crystal structure, identify its localization to the chloroplast, and provide evidence for a role in TA protein binding. The structure is identical to that of a cyanobacterial Get3 homolog, which is further refined here. Distinct features of Get3d include an incomplete active site, a “closed” conformation in the apo-state, and a hydrophobic chamber. Both homologs have ATPase activity and are capable of binding TA proteins, supporting a potential role in TA protein targeting. Get3d is first found with the development of photosynthesis and conserved across 1.2 billion years into the chloroplasts of higher plants across the evolution of photosynthesis suggesting a role in the homeostasis of photosynthetic machinery. |
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In the eukaryotic cytoplasm, Get3 delivers tail-anchored (TA) integral membrane proteins, defined by a single transmembrane helix at their C terminus, to the endoplasmic reticulum. While most eukaryotes have a single Get3 gene, plants are notable for having multiple Get3 paralogs. Get3d is conserved across land plants and photosynthetic bacteria and includes a distinctive C-terminal α-crystallin domain. After tracing the evolutionary origin of Get3d, we solve the Arabidopsis thaliana Get3d crystal structure, identify its localization to the chloroplast, and provide evidence for a role in TA protein binding. The structure is identical to that of a cyanobacterial Get3 homolog, which is further refined here. Distinct features of Get3d include an incomplete active site, a “closed” conformation in the apo-state, and a hydrophobic chamber. Both homologs have ATPase activity and are capable of binding TA proteins, supporting a potential role in TA protein targeting. Get3d is first found with the development of photosynthesis and conserved across 1.2 billion years into the chloroplasts of higher plants across the evolution of photosynthesis suggesting a role in the homeostasis of photosynthetic machinery.</description><identifier>ISSN: 0021-9258</identifier><identifier>ISSN: 1083-351X</identifier><identifier>EISSN: 1083-351X</identifier><identifier>DOI: 10.1016/j.jbc.2023.104752</identifier><identifier>PMID: 37100288</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Adenosine Triphosphatases - metabolism ; Arabidopsis - genetics ; Arabidopsis - metabolism ; Arabidopsis Proteins - genetics ; Arabidopsis Proteins - metabolism ; cyanobacteria ; Embryophyta ; Endoplasmic Reticulum - metabolism ; GET pathway ; Get3 ; Guanine Nucleotide Exchange Factors - metabolism ; NTPase ; Photosynthesis ; plant ; protein structure ; protein targeting ; structural biology ; tail-anchored protein</subject><ispartof>The Journal of biological chemistry, 2023-06, Vol.299 (6), p.104752, Article 104752</ispartof><rights>2023 The Authors</rights><rights>Copyright © 2023 The Authors. Published by Elsevier Inc. All rights reserved.</rights><rights>2023 The Authors 2023</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c3192-32321f2c41ddfec1df3ecf5c06c1a468b95c9b0187bbc994691f4994e73ae8533</cites><orcidid>0000-0001-6515-2396 ; 0000-0003-2977-3683 ; 0000-0002-0021-889X</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC10248533/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC10248533/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,860,881,27901,27902,53766,53768</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/37100288$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Barlow, Alexandra N.</creatorcontrib><creatorcontrib>Manu, M.S.</creatorcontrib><creatorcontrib>Saladi, Shyam M.</creatorcontrib><creatorcontrib>Tarr, Paul T.</creatorcontrib><creatorcontrib>Yadav, Yashpal</creatorcontrib><creatorcontrib>Thinn, Aye M.M.</creatorcontrib><creatorcontrib>Zhu, Yun</creatorcontrib><creatorcontrib>Laganowsky, Arthur D.</creatorcontrib><creatorcontrib>Clemons, William M.</creatorcontrib><creatorcontrib>Ramasamy, Sureshkumar</creatorcontrib><title>Structures of Get3d reveal a distinct architecture associated with the emergence of photosynthesis</title><title>The Journal of biological chemistry</title><addtitle>J Biol Chem</addtitle><description>Homologs of the protein Get3 have been identified in all domains yet remain to be fully characterized. In the eukaryotic cytoplasm, Get3 delivers tail-anchored (TA) integral membrane proteins, defined by a single transmembrane helix at their C terminus, to the endoplasmic reticulum. While most eukaryotes have a single Get3 gene, plants are notable for having multiple Get3 paralogs. Get3d is conserved across land plants and photosynthetic bacteria and includes a distinctive C-terminal α-crystallin domain. After tracing the evolutionary origin of Get3d, we solve the Arabidopsis thaliana Get3d crystal structure, identify its localization to the chloroplast, and provide evidence for a role in TA protein binding. The structure is identical to that of a cyanobacterial Get3 homolog, which is further refined here. Distinct features of Get3d include an incomplete active site, a “closed” conformation in the apo-state, and a hydrophobic chamber. Both homologs have ATPase activity and are capable of binding TA proteins, supporting a potential role in TA protein targeting. Get3d is first found with the development of photosynthesis and conserved across 1.2 billion years into the chloroplasts of higher plants across the evolution of photosynthesis suggesting a role in the homeostasis of photosynthetic machinery.</description><subject>Adenosine Triphosphatases - metabolism</subject><subject>Arabidopsis - genetics</subject><subject>Arabidopsis - metabolism</subject><subject>Arabidopsis Proteins - genetics</subject><subject>Arabidopsis Proteins - metabolism</subject><subject>cyanobacteria</subject><subject>Embryophyta</subject><subject>Endoplasmic Reticulum - metabolism</subject><subject>GET pathway</subject><subject>Get3</subject><subject>Guanine Nucleotide Exchange Factors - metabolism</subject><subject>NTPase</subject><subject>Photosynthesis</subject><subject>plant</subject><subject>protein structure</subject><subject>protein targeting</subject><subject>structural biology</subject><subject>tail-anchored protein</subject><issn>0021-9258</issn><issn>1083-351X</issn><issn>1083-351X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kUFv1DAQhS1ERZfCD-CCfOSSxWMn2VgcEKqgrVSpB0DiZjmTSeNVNl5sZ6v--zpsqeBSX0bWe_PZeo-xdyDWIKD-uF1vW1xLIVW-l5tKvmArEI0qVAW_XrKVEBIKLavmlL2OcSvyKTW8YqdqA1lrmhVrv6cwY5oDRe57fkFJdTzQgezILe9cTG7CxG3AwSX6Y-Q2Ro_OJur4nUsDTwNx2lG4pQlpoewHn3y8n7IQXXzDTno7Rnr7OM_Yz29ff5xfFtc3F1fnX64LVKBloaSS0Essoet6Quh6RdhXKGoEW9ZNqyvUrYBm07aodVlr6Ms8aaMsNZVSZ-zzkbuf2x11SFMKdjT74HY23Btvnflfmdxgbv3BgJDlAsiED4-E4H_PFJPZuYg0jnYiP0cjG1FrXeWosxWOVgw-xkD90zsgzFKO2ZpcjlnKMcdy8s77fz_4tPG3jWz4dDRQjungKJiIbgm1cyFnbzrvnsE_AHzeodk</recordid><startdate>20230601</startdate><enddate>20230601</enddate><creator>Barlow, Alexandra N.</creator><creator>Manu, M.S.</creator><creator>Saladi, Shyam M.</creator><creator>Tarr, Paul T.</creator><creator>Yadav, Yashpal</creator><creator>Thinn, Aye M.M.</creator><creator>Zhu, Yun</creator><creator>Laganowsky, Arthur D.</creator><creator>Clemons, William M.</creator><creator>Ramasamy, Sureshkumar</creator><general>Elsevier Inc</general><general>American Society for Biochemistry and Molecular Biology</general><scope>6I.</scope><scope>AAFTH</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0001-6515-2396</orcidid><orcidid>https://orcid.org/0000-0003-2977-3683</orcidid><orcidid>https://orcid.org/0000-0002-0021-889X</orcidid></search><sort><creationdate>20230601</creationdate><title>Structures of Get3d reveal a distinct architecture associated with the emergence of photosynthesis</title><author>Barlow, Alexandra N. ; Manu, M.S. ; Saladi, Shyam M. ; Tarr, Paul T. ; Yadav, Yashpal ; Thinn, Aye M.M. ; Zhu, Yun ; Laganowsky, Arthur D. ; Clemons, William M. ; Ramasamy, Sureshkumar</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3192-32321f2c41ddfec1df3ecf5c06c1a468b95c9b0187bbc994691f4994e73ae8533</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Adenosine Triphosphatases - metabolism</topic><topic>Arabidopsis - genetics</topic><topic>Arabidopsis - metabolism</topic><topic>Arabidopsis Proteins - genetics</topic><topic>Arabidopsis Proteins - metabolism</topic><topic>cyanobacteria</topic><topic>Embryophyta</topic><topic>Endoplasmic Reticulum - metabolism</topic><topic>GET pathway</topic><topic>Get3</topic><topic>Guanine Nucleotide Exchange Factors - metabolism</topic><topic>NTPase</topic><topic>Photosynthesis</topic><topic>plant</topic><topic>protein structure</topic><topic>protein targeting</topic><topic>structural biology</topic><topic>tail-anchored protein</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Barlow, Alexandra N.</creatorcontrib><creatorcontrib>Manu, M.S.</creatorcontrib><creatorcontrib>Saladi, Shyam M.</creatorcontrib><creatorcontrib>Tarr, Paul T.</creatorcontrib><creatorcontrib>Yadav, Yashpal</creatorcontrib><creatorcontrib>Thinn, Aye M.M.</creatorcontrib><creatorcontrib>Zhu, Yun</creatorcontrib><creatorcontrib>Laganowsky, Arthur D.</creatorcontrib><creatorcontrib>Clemons, William M.</creatorcontrib><creatorcontrib>Ramasamy, Sureshkumar</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>The Journal of biological chemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Barlow, Alexandra N.</au><au>Manu, M.S.</au><au>Saladi, Shyam M.</au><au>Tarr, Paul T.</au><au>Yadav, Yashpal</au><au>Thinn, Aye M.M.</au><au>Zhu, Yun</au><au>Laganowsky, Arthur D.</au><au>Clemons, William M.</au><au>Ramasamy, Sureshkumar</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Structures of Get3d reveal a distinct architecture associated with the emergence of photosynthesis</atitle><jtitle>The Journal of biological chemistry</jtitle><addtitle>J Biol Chem</addtitle><date>2023-06-01</date><risdate>2023</risdate><volume>299</volume><issue>6</issue><spage>104752</spage><pages>104752-</pages><artnum>104752</artnum><issn>0021-9258</issn><issn>1083-351X</issn><eissn>1083-351X</eissn><abstract>Homologs of the protein Get3 have been identified in all domains yet remain to be fully characterized. In the eukaryotic cytoplasm, Get3 delivers tail-anchored (TA) integral membrane proteins, defined by a single transmembrane helix at their C terminus, to the endoplasmic reticulum. While most eukaryotes have a single Get3 gene, plants are notable for having multiple Get3 paralogs. Get3d is conserved across land plants and photosynthetic bacteria and includes a distinctive C-terminal α-crystallin domain. After tracing the evolutionary origin of Get3d, we solve the Arabidopsis thaliana Get3d crystal structure, identify its localization to the chloroplast, and provide evidence for a role in TA protein binding. The structure is identical to that of a cyanobacterial Get3 homolog, which is further refined here. Distinct features of Get3d include an incomplete active site, a “closed” conformation in the apo-state, and a hydrophobic chamber. Both homologs have ATPase activity and are capable of binding TA proteins, supporting a potential role in TA protein targeting. 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subjects | Adenosine Triphosphatases - metabolism Arabidopsis - genetics Arabidopsis - metabolism Arabidopsis Proteins - genetics Arabidopsis Proteins - metabolism cyanobacteria Embryophyta Endoplasmic Reticulum - metabolism GET pathway Get3 Guanine Nucleotide Exchange Factors - metabolism NTPase Photosynthesis plant protein structure protein targeting structural biology tail-anchored protein |
title | Structures of Get3d reveal a distinct architecture associated with the emergence of photosynthesis |
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