Severe fever with thrombocytopenia syndrome virus from ticks: a molecular epidemiological study of a patient in the Republic of Korea
Severe fever with thrombocytopenia syndrome (SFTS) is a tick-borne infectious disease caused by Dabie bandavirus , commonly called SFTS virus (SFTSV). In the Republic of Korea (ROK), 1,504 cases of SFTS have been reported since the first human case was identified in 2013 until 2021. However, no case...
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description | Severe fever with thrombocytopenia syndrome (SFTS) is a tick-borne infectious disease caused by
Dabie bandavirus
, commonly called SFTS virus (SFTSV). In the Republic of Korea (ROK), 1,504 cases of SFTS have been reported since the first human case was identified in 2013 until 2021. However, no case exists to provide molecular evidence between questing tick and patients with confirmed SFTS in the same living environment. In this study, we investigated the presence of ticks near the area of a patient infected with SFTSV. Ticks were collected by flagging and dry ice-baited traps at three spots in the vegetation around the patients’ residence in Chuncheon City, Gangwon Province (ROK). Among the tick samples collected, the presence of SFTSV was genetically determined using reverse transcription PCR, followed by the phylogenetic analysis of the tick virus sequences and SFTSV found in the patient. In total 1,212
Haemaphysalis longicornis
ticks were collected, and SFTSV was detected at a minimum infection rate of 5.3% (33 pools/618 tested ticks). The sequences of SFTSV in ticks were 99.6–100% identical with the patient’s SFTSV in the M segment. To the best of our knowledge, this study is the first case to provide a molecular correlation between SFTSV in questing ticks collected from residence and patient with SFTS in the ROK. The present results provide useful information for the epidemiological investigation of patients with SFTS using ticks as vectors of SFTSV. |
doi_str_mv | 10.1007/s10493-023-00783-6 |
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Dabie bandavirus
, commonly called SFTS virus (SFTSV). In the Republic of Korea (ROK), 1,504 cases of SFTS have been reported since the first human case was identified in 2013 until 2021. However, no case exists to provide molecular evidence between questing tick and patients with confirmed SFTS in the same living environment. In this study, we investigated the presence of ticks near the area of a patient infected with SFTSV. Ticks were collected by flagging and dry ice-baited traps at three spots in the vegetation around the patients’ residence in Chuncheon City, Gangwon Province (ROK). Among the tick samples collected, the presence of SFTSV was genetically determined using reverse transcription PCR, followed by the phylogenetic analysis of the tick virus sequences and SFTSV found in the patient. In total 1,212
Haemaphysalis longicornis
ticks were collected, and SFTSV was detected at a minimum infection rate of 5.3% (33 pools/618 tested ticks). The sequences of SFTSV in ticks were 99.6–100% identical with the patient’s SFTSV in the M segment. To the best of our knowledge, this study is the first case to provide a molecular correlation between SFTSV in questing ticks collected from residence and patient with SFTS in the ROK. The present results provide useful information for the epidemiological investigation of patients with SFTS using ticks as vectors of SFTSV.</description><identifier>ISSN: 0168-8162</identifier><identifier>EISSN: 1572-9702</identifier><identifier>DOI: 10.1007/s10493-023-00783-6</identifier><identifier>PMID: 36928542</identifier><language>eng</language><publisher>Cham: Springer International Publishing</publisher><subject>Animal Ecology ; Animal Genetics and Genomics ; Animal Systematics/Taxonomy/Biogeography ; Animals ; Arachnids ; Biomedical and Life Sciences ; Dry ice ; Entomology ; Epidemiology ; Fever ; Humans ; Infectious diseases ; Life Sciences ; Patients ; Phlebovirus - genetics ; Phylogeny ; Republic of Korea - epidemiology ; Reverse transcription ; Severe Fever with Thrombocytopenia Syndrome ; Thrombocytopenia ; Ticks ; Vectors ; Viruses</subject><ispartof>Experimental & applied acarology, 2023-02, Vol.89 (2), p.305-315</ispartof><rights>The Author(s) 2023. Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.</rights><rights>2023. The Author(s).</rights><rights>The Author(s) 2023. Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>The Author(s) 2023, Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c475t-eb61c0a405b6101167dbef2c7426a88927f3c61ef027bf10386d0c5fa00f28bc3</citedby><cites>FETCH-LOGICAL-c475t-eb61c0a405b6101167dbef2c7426a88927f3c61ef027bf10386d0c5fa00f28bc3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s10493-023-00783-6$$EPDF$$P50$$Gspringer$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s10493-023-00783-6$$EHTML$$P50$$Gspringer$$Hfree_for_read</linktohtml><link.rule.ids>230,314,780,784,885,27923,27924,41487,42556,51318</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/36928542$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Kim, Seong Yoon</creatorcontrib><creatorcontrib>Seo, Choong Won</creatorcontrib><creatorcontrib>Lee, Hee Il</creatorcontrib><title>Severe fever with thrombocytopenia syndrome virus from ticks: a molecular epidemiological study of a patient in the Republic of Korea</title><title>Experimental & applied acarology</title><addtitle>Exp Appl Acarol</addtitle><addtitle>Exp Appl Acarol</addtitle><description>Severe fever with thrombocytopenia syndrome (SFTS) is a tick-borne infectious disease caused by
Dabie bandavirus
, commonly called SFTS virus (SFTSV). In the Republic of Korea (ROK), 1,504 cases of SFTS have been reported since the first human case was identified in 2013 until 2021. However, no case exists to provide molecular evidence between questing tick and patients with confirmed SFTS in the same living environment. In this study, we investigated the presence of ticks near the area of a patient infected with SFTSV. Ticks were collected by flagging and dry ice-baited traps at three spots in the vegetation around the patients’ residence in Chuncheon City, Gangwon Province (ROK). Among the tick samples collected, the presence of SFTSV was genetically determined using reverse transcription PCR, followed by the phylogenetic analysis of the tick virus sequences and SFTSV found in the patient. In total 1,212
Haemaphysalis longicornis
ticks were collected, and SFTSV was detected at a minimum infection rate of 5.3% (33 pools/618 tested ticks). The sequences of SFTSV in ticks were 99.6–100% identical with the patient’s SFTSV in the M segment. To the best of our knowledge, this study is the first case to provide a molecular correlation between SFTSV in questing ticks collected from residence and patient with SFTS in the ROK. The present results provide useful information for the epidemiological investigation of patients with SFTS using ticks as vectors of SFTSV.</description><subject>Animal Ecology</subject><subject>Animal Genetics and Genomics</subject><subject>Animal Systematics/Taxonomy/Biogeography</subject><subject>Animals</subject><subject>Arachnids</subject><subject>Biomedical and Life Sciences</subject><subject>Dry ice</subject><subject>Entomology</subject><subject>Epidemiology</subject><subject>Fever</subject><subject>Humans</subject><subject>Infectious diseases</subject><subject>Life Sciences</subject><subject>Patients</subject><subject>Phlebovirus - genetics</subject><subject>Phylogeny</subject><subject>Republic of Korea - epidemiology</subject><subject>Reverse transcription</subject><subject>Severe Fever with Thrombocytopenia Syndrome</subject><subject>Thrombocytopenia</subject><subject>Ticks</subject><subject>Vectors</subject><subject>Viruses</subject><issn>0168-8162</issn><issn>1572-9702</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><sourceid>C6C</sourceid><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp9kc9u1DAQxi0EotvCC3BAlrhwCYydxE64oKqCglqpEn_OluOMd12SONjOon0A3hsv2xbogYM1I8_P38z4I-QZg1cMQL6ODKq2LIDnA7IpC_GArFgtedFK4A_JCphoioYJfkSOY7wGgBpE_ZgclaLlTV3xFfn5GbcYkNp9oD9c2tC0CX7svNklP-PkNI27qc9XSLcuLJHanNPkzLf4hmo6-gHNMuhAcXY9js4Pfu2MHmhMS7-j3mZo1snhlKibsjrSTzgv3eDMvnjhA-on5JHVQ8SnN_GEfH3_7svZh-Ly6vzj2ellYSpZpwI7wQzoCuqcAGNC9h1abmTFhW6alktbGsHQApedZVA2ogdTWw1gedOZ8oS8Pejm_iP2Js8U9KDm4EYddsprp_6tTG6j1n6r8n-3UkrICi9vFIL_vmBManTR4DDoCf0SFW8AWNXW9R59cQ-99kuY8n6Ky7ZtsybITPEDZYKPMaC9m4bBvq1UB5tVtln9tlmJ_Oj533vcPbn1NQPlAYi5NK0x_On9H9lf9xq1sg</recordid><startdate>20230201</startdate><enddate>20230201</enddate><creator>Kim, Seong Yoon</creator><creator>Seo, Choong Won</creator><creator>Lee, Hee Il</creator><general>Springer International Publishing</general><general>Springer Nature B.V</general><scope>C6C</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7SS</scope><scope>7T7</scope><scope>7U9</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>88I</scope><scope>8AF</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M2P</scope><scope>M7N</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20230201</creationdate><title>Severe fever with thrombocytopenia syndrome virus from ticks: a molecular epidemiological study of a patient in the Republic of Korea</title><author>Kim, Seong Yoon ; Seo, Choong Won ; Lee, Hee Il</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c475t-eb61c0a405b6101167dbef2c7426a88927f3c61ef027bf10386d0c5fa00f28bc3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Animal Ecology</topic><topic>Animal Genetics and Genomics</topic><topic>Animal Systematics/Taxonomy/Biogeography</topic><topic>Animals</topic><topic>Arachnids</topic><topic>Biomedical and Life Sciences</topic><topic>Dry ice</topic><topic>Entomology</topic><topic>Epidemiology</topic><topic>Fever</topic><topic>Humans</topic><topic>Infectious diseases</topic><topic>Life Sciences</topic><topic>Patients</topic><topic>Phlebovirus - genetics</topic><topic>Phylogeny</topic><topic>Republic of Korea - epidemiology</topic><topic>Reverse transcription</topic><topic>Severe Fever with Thrombocytopenia Syndrome</topic><topic>Thrombocytopenia</topic><topic>Ticks</topic><topic>Vectors</topic><topic>Viruses</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kim, Seong Yoon</creatorcontrib><creatorcontrib>Seo, Choong Won</creatorcontrib><creatorcontrib>Lee, Hee Il</creatorcontrib><collection>Springer Nature OA Free Journals</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Virology and AIDS Abstracts</collection><collection>Agricultural Science Collection</collection><collection>ProQuest Health and Medical</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Science Database (Alumni Edition)</collection><collection>STEM Database</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Agricultural Science Database</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>ProQuest Science Journals</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>ProQuest Biological Science Journals</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Experimental & applied acarology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kim, Seong Yoon</au><au>Seo, Choong Won</au><au>Lee, Hee Il</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Severe fever with thrombocytopenia syndrome virus from ticks: a molecular epidemiological study of a patient in the Republic of Korea</atitle><jtitle>Experimental & applied acarology</jtitle><stitle>Exp Appl Acarol</stitle><addtitle>Exp Appl Acarol</addtitle><date>2023-02-01</date><risdate>2023</risdate><volume>89</volume><issue>2</issue><spage>305</spage><epage>315</epage><pages>305-315</pages><issn>0168-8162</issn><eissn>1572-9702</eissn><abstract>Severe fever with thrombocytopenia syndrome (SFTS) is a tick-borne infectious disease caused by
Dabie bandavirus
, commonly called SFTS virus (SFTSV). In the Republic of Korea (ROK), 1,504 cases of SFTS have been reported since the first human case was identified in 2013 until 2021. However, no case exists to provide molecular evidence between questing tick and patients with confirmed SFTS in the same living environment. In this study, we investigated the presence of ticks near the area of a patient infected with SFTSV. Ticks were collected by flagging and dry ice-baited traps at three spots in the vegetation around the patients’ residence in Chuncheon City, Gangwon Province (ROK). Among the tick samples collected, the presence of SFTSV was genetically determined using reverse transcription PCR, followed by the phylogenetic analysis of the tick virus sequences and SFTSV found in the patient. In total 1,212
Haemaphysalis longicornis
ticks were collected, and SFTSV was detected at a minimum infection rate of 5.3% (33 pools/618 tested ticks). The sequences of SFTSV in ticks were 99.6–100% identical with the patient’s SFTSV in the M segment. To the best of our knowledge, this study is the first case to provide a molecular correlation between SFTSV in questing ticks collected from residence and patient with SFTS in the ROK. The present results provide useful information for the epidemiological investigation of patients with SFTS using ticks as vectors of SFTSV.</abstract><cop>Cham</cop><pub>Springer International Publishing</pub><pmid>36928542</pmid><doi>10.1007/s10493-023-00783-6</doi><tpages>11</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Animal Ecology Animal Genetics and Genomics Animal Systematics/Taxonomy/Biogeography Animals Arachnids Biomedical and Life Sciences Dry ice Entomology Epidemiology Fever Humans Infectious diseases Life Sciences Patients Phlebovirus - genetics Phylogeny Republic of Korea - epidemiology Reverse transcription Severe Fever with Thrombocytopenia Syndrome Thrombocytopenia Ticks Vectors Viruses |
title | Severe fever with thrombocytopenia syndrome virus from ticks: a molecular epidemiological study of a patient in the Republic of Korea |
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