Coumarin-Based Compounds as Inhibitors of Tyrosinase/Tyrosine Hydroxylase: Synthesis, Kinetic Studies, and In Silico Approaches
Cancer represents the main cause of morbidity and mortality worldwide, constituting a serious health problem. In this context, melanoma represents the most aggressive and fatal type of skin cancer, with death rates increasing every year. Scientific efforts have been addressed to the development of i...
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creator | Nunes, Jéssica Alves Araújo, Rodrigo Santos Aquino de Silva, Fabrícia Nunes da Cytarska, Joanna Łączkowski, Krzysztof Z Cardoso, Sílvia Helena Mendonça-Júnior, Francisco Jaime Bezerra Silva-Júnior, Edeildo Ferreira da |
description | Cancer represents the main cause of morbidity and mortality worldwide, constituting a serious health problem. In this context, melanoma represents the most aggressive and fatal type of skin cancer, with death rates increasing every year. Scientific efforts have been addressed to the development of inhibitors targeting the tyrosinase enzyme as potential anti-melanoma agents due to the importance of this enzyme in melanogenesis biosynthesis. Coumarin-based compounds have shown potential activity as anti-melanoma agents and tyrosinase inhibitors. In this study, coumarin-based derivatives were designed, synthesized, and experimentally evaluated upon tyrosinase. Compound
, a coumarin-thiosemicarbazone analog, exhibited potent anti-tyrosinase activity, with an IC
value of 42.16 ± 5.16 µM, being more active than ascorbic acid and kojic acid, both reference inhibitors. The kinetic study showed that
acts as a mixed inhibitor. Still, for this compound, molecular dynamics (MD) simulations were performed to determine the stability of the complex with tyrosinase, generating RMSD, RMSF, and interaction plots. Additionally, docking studies were performed to elucidate the binding pose at the tyrosinase, suggesting that the hydroxyl group of coumarin derivative performs coordinate bonds (bidentate) with the copper(II) ions at distances ranging from 2.09 to 2.61 Å. Then, MM/PBSA calculations revealed that van der Waals interactions are the most relevant intermolecular forces for complex stabilization. Furthermore, it was observed that
has a binding energy (Δ
) value similar to tropolone, a tyrosinase inhibitor. Therefore, the data obtained in this study will be useful for designing and developing novel coumarin-based analogs targeting the tyrosinase enzyme. |
doi_str_mv | 10.3390/ijms24065216 |
format | Article |
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, a coumarin-thiosemicarbazone analog, exhibited potent anti-tyrosinase activity, with an IC
value of 42.16 ± 5.16 µM, being more active than ascorbic acid and kojic acid, both reference inhibitors. The kinetic study showed that
acts as a mixed inhibitor. Still, for this compound, molecular dynamics (MD) simulations were performed to determine the stability of the complex with tyrosinase, generating RMSD, RMSF, and interaction plots. Additionally, docking studies were performed to elucidate the binding pose at the tyrosinase, suggesting that the hydroxyl group of coumarin derivative performs coordinate bonds (bidentate) with the copper(II) ions at distances ranging from 2.09 to 2.61 Å. Then, MM/PBSA calculations revealed that van der Waals interactions are the most relevant intermolecular forces for complex stabilization. Furthermore, it was observed that
has a binding energy (Δ
) value similar to tropolone, a tyrosinase inhibitor. Therefore, the data obtained in this study will be useful for designing and developing novel coumarin-based analogs targeting the tyrosinase enzyme.</description><identifier>ISSN: 1422-0067</identifier><identifier>ISSN: 1661-6596</identifier><identifier>EISSN: 1422-0067</identifier><identifier>DOI: 10.3390/ijms24065216</identifier><identifier>PMID: 36982292</identifier><language>eng</language><publisher>Switzerland: MDPI AG</publisher><subject>Acids ; Agaricales ; Ascorbic acid ; Biosynthesis ; Chromatography ; Copper compounds ; Coumarin ; Coumarins - pharmacology ; Dynamic stability ; Enzyme Inhibitors - chemistry ; Force and energy ; Humans ; Hydroxyl groups ; Inhibitors ; Intermolecular forces ; Kinetics ; Kojic acid ; Melanoma ; Melanoma - metabolism ; Metabolites ; Molecular Docking Simulation ; Molecular dynamics ; Molecular Structure ; Monophenol Monooxygenase - metabolism ; Morbidity ; NMR ; Nuclear magnetic resonance ; Skin cancer ; Structure-Activity Relationship ; Tyrosinase ; Tyrosine ; Tyrosine 3-monooxygenase ; Tyrosine 3-Monooxygenase - metabolism</subject><ispartof>International journal of molecular sciences, 2023-03, Vol.24 (6), p.5216</ispartof><rights>COPYRIGHT 2023 MDPI AG</rights><rights>2023 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2023 by the authors. 2023</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c452t-fc87c7e615f7e3a5c41edff7edb0544696e25f66204f25bb4d151d1c59d0ae4c3</citedby><cites>FETCH-LOGICAL-c452t-fc87c7e615f7e3a5c41edff7edb0544696e25f66204f25bb4d151d1c59d0ae4c3</cites><orcidid>0000-0002-2403-8746 ; 0000-0002-5313-6812 ; 0000-0003-3588-833X ; 0000-0002-8038-2007 ; 0000-0003-2107-2719 ; 0000-0002-1527-4501</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC10048804/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC10048804/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,27901,27902,53766,53768</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/36982292$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Nunes, Jéssica Alves</creatorcontrib><creatorcontrib>Araújo, Rodrigo Santos Aquino de</creatorcontrib><creatorcontrib>Silva, Fabrícia Nunes da</creatorcontrib><creatorcontrib>Cytarska, Joanna</creatorcontrib><creatorcontrib>Łączkowski, Krzysztof Z</creatorcontrib><creatorcontrib>Cardoso, Sílvia Helena</creatorcontrib><creatorcontrib>Mendonça-Júnior, Francisco Jaime Bezerra</creatorcontrib><creatorcontrib>Silva-Júnior, Edeildo Ferreira da</creatorcontrib><title>Coumarin-Based Compounds as Inhibitors of Tyrosinase/Tyrosine Hydroxylase: Synthesis, Kinetic Studies, and In Silico Approaches</title><title>International journal of molecular sciences</title><addtitle>Int J Mol Sci</addtitle><description>Cancer represents the main cause of morbidity and mortality worldwide, constituting a serious health problem. In this context, melanoma represents the most aggressive and fatal type of skin cancer, with death rates increasing every year. Scientific efforts have been addressed to the development of inhibitors targeting the tyrosinase enzyme as potential anti-melanoma agents due to the importance of this enzyme in melanogenesis biosynthesis. Coumarin-based compounds have shown potential activity as anti-melanoma agents and tyrosinase inhibitors. In this study, coumarin-based derivatives were designed, synthesized, and experimentally evaluated upon tyrosinase. Compound
, a coumarin-thiosemicarbazone analog, exhibited potent anti-tyrosinase activity, with an IC
value of 42.16 ± 5.16 µM, being more active than ascorbic acid and kojic acid, both reference inhibitors. The kinetic study showed that
acts as a mixed inhibitor. Still, for this compound, molecular dynamics (MD) simulations were performed to determine the stability of the complex with tyrosinase, generating RMSD, RMSF, and interaction plots. Additionally, docking studies were performed to elucidate the binding pose at the tyrosinase, suggesting that the hydroxyl group of coumarin derivative performs coordinate bonds (bidentate) with the copper(II) ions at distances ranging from 2.09 to 2.61 Å. Then, MM/PBSA calculations revealed that van der Waals interactions are the most relevant intermolecular forces for complex stabilization. Furthermore, it was observed that
has a binding energy (Δ
) value similar to tropolone, a tyrosinase inhibitor. Therefore, the data obtained in this study will be useful for designing and developing novel coumarin-based analogs targeting the tyrosinase enzyme.</description><subject>Acids</subject><subject>Agaricales</subject><subject>Ascorbic acid</subject><subject>Biosynthesis</subject><subject>Chromatography</subject><subject>Copper compounds</subject><subject>Coumarin</subject><subject>Coumarins - pharmacology</subject><subject>Dynamic stability</subject><subject>Enzyme Inhibitors - chemistry</subject><subject>Force and energy</subject><subject>Humans</subject><subject>Hydroxyl groups</subject><subject>Inhibitors</subject><subject>Intermolecular forces</subject><subject>Kinetics</subject><subject>Kojic acid</subject><subject>Melanoma</subject><subject>Melanoma - metabolism</subject><subject>Metabolites</subject><subject>Molecular Docking Simulation</subject><subject>Molecular dynamics</subject><subject>Molecular Structure</subject><subject>Monophenol Monooxygenase - metabolism</subject><subject>Morbidity</subject><subject>NMR</subject><subject>Nuclear magnetic resonance</subject><subject>Skin cancer</subject><subject>Structure-Activity Relationship</subject><subject>Tyrosinase</subject><subject>Tyrosine</subject><subject>Tyrosine 3-monooxygenase</subject><subject>Tyrosine 3-Monooxygenase - 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pharmacology</topic><topic>Dynamic stability</topic><topic>Enzyme Inhibitors - chemistry</topic><topic>Force and energy</topic><topic>Humans</topic><topic>Hydroxyl groups</topic><topic>Inhibitors</topic><topic>Intermolecular forces</topic><topic>Kinetics</topic><topic>Kojic acid</topic><topic>Melanoma</topic><topic>Melanoma - metabolism</topic><topic>Metabolites</topic><topic>Molecular Docking Simulation</topic><topic>Molecular dynamics</topic><topic>Molecular Structure</topic><topic>Monophenol Monooxygenase - metabolism</topic><topic>Morbidity</topic><topic>NMR</topic><topic>Nuclear magnetic resonance</topic><topic>Skin cancer</topic><topic>Structure-Activity Relationship</topic><topic>Tyrosinase</topic><topic>Tyrosine</topic><topic>Tyrosine 3-monooxygenase</topic><topic>Tyrosine 3-Monooxygenase - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Nunes, Jéssica Alves</creatorcontrib><creatorcontrib>Araújo, Rodrigo Santos Aquino de</creatorcontrib><creatorcontrib>Silva, Fabrícia Nunes da</creatorcontrib><creatorcontrib>Cytarska, Joanna</creatorcontrib><creatorcontrib>Łączkowski, Krzysztof Z</creatorcontrib><creatorcontrib>Cardoso, Sílvia Helena</creatorcontrib><creatorcontrib>Mendonça-Júnior, Francisco Jaime Bezerra</creatorcontrib><creatorcontrib>Silva-Júnior, Edeildo Ferreira da</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>ProQuest One Community College</collection><collection>Coronavirus Research Database</collection><collection>ProQuest Central Korea</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Research Library</collection><collection>Research Library (Corporate)</collection><collection>ProQuest Central (New)</collection><collection>ProQuest One Academic (New)</collection><collection>Publicly Available Content Database</collection><collection>ProQuest Health & Medical Research Collection</collection><collection>ProQuest One Academic Middle East (New)</collection><collection>ProQuest One Health & Nursing</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>MEDLINE - 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In this context, melanoma represents the most aggressive and fatal type of skin cancer, with death rates increasing every year. Scientific efforts have been addressed to the development of inhibitors targeting the tyrosinase enzyme as potential anti-melanoma agents due to the importance of this enzyme in melanogenesis biosynthesis. Coumarin-based compounds have shown potential activity as anti-melanoma agents and tyrosinase inhibitors. In this study, coumarin-based derivatives were designed, synthesized, and experimentally evaluated upon tyrosinase. Compound
, a coumarin-thiosemicarbazone analog, exhibited potent anti-tyrosinase activity, with an IC
value of 42.16 ± 5.16 µM, being more active than ascorbic acid and kojic acid, both reference inhibitors. The kinetic study showed that
acts as a mixed inhibitor. Still, for this compound, molecular dynamics (MD) simulations were performed to determine the stability of the complex with tyrosinase, generating RMSD, RMSF, and interaction plots. Additionally, docking studies were performed to elucidate the binding pose at the tyrosinase, suggesting that the hydroxyl group of coumarin derivative performs coordinate bonds (bidentate) with the copper(II) ions at distances ranging from 2.09 to 2.61 Å. Then, MM/PBSA calculations revealed that van der Waals interactions are the most relevant intermolecular forces for complex stabilization. Furthermore, it was observed that
has a binding energy (Δ
) value similar to tropolone, a tyrosinase inhibitor. Therefore, the data obtained in this study will be useful for designing and developing novel coumarin-based analogs targeting the tyrosinase enzyme.</abstract><cop>Switzerland</cop><pub>MDPI AG</pub><pmid>36982292</pmid><doi>10.3390/ijms24065216</doi><orcidid>https://orcid.org/0000-0002-2403-8746</orcidid><orcidid>https://orcid.org/0000-0002-5313-6812</orcidid><orcidid>https://orcid.org/0000-0003-3588-833X</orcidid><orcidid>https://orcid.org/0000-0002-8038-2007</orcidid><orcidid>https://orcid.org/0000-0003-2107-2719</orcidid><orcidid>https://orcid.org/0000-0002-1527-4501</orcidid><oa>free_for_read</oa></addata></record> |
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source | MDPI - Multidisciplinary Digital Publishing Institute; MEDLINE; EZB-FREE-00999 freely available EZB journals; PubMed Central |
subjects | Acids Agaricales Ascorbic acid Biosynthesis Chromatography Copper compounds Coumarin Coumarins - pharmacology Dynamic stability Enzyme Inhibitors - chemistry Force and energy Humans Hydroxyl groups Inhibitors Intermolecular forces Kinetics Kojic acid Melanoma Melanoma - metabolism Metabolites Molecular Docking Simulation Molecular dynamics Molecular Structure Monophenol Monooxygenase - metabolism Morbidity NMR Nuclear magnetic resonance Skin cancer Structure-Activity Relationship Tyrosinase Tyrosine Tyrosine 3-monooxygenase Tyrosine 3-Monooxygenase - metabolism |
title | Coumarin-Based Compounds as Inhibitors of Tyrosinase/Tyrosine Hydroxylase: Synthesis, Kinetic Studies, and In Silico Approaches |
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